Os11g0108700

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0108700| Description = Similar to Laccase (Diphenol oxidase)| Version = NM_001072080.2 GI:297611055 GeneID:4349566| Length = 4259 bp| Defi...")
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Gene Name

Os11g0108700

Description

Similar to Laccase (Diphenol oxidase)

Version

NM_001072080.2 GI:297611055 GeneID:4349566

Length

4259 bp

Definition

Oryza sativa Japonica Group Os11g0108700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:391505..395763

Sequence Coding Region

391505..391862,394553..395763

Expression

GEO Profiles:Os11g0108700

Genome Context

<gbrowseImage1> name=NC_008404:391505..395763 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:391505..395763 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggtgaacggtcagttcccggggccgacgctggagataaacgaaggggactcgctgatcatcaacctgataaaccgtgggaggtacaacatgacgctgcactggcacggggtgcggcagatgaggacggggtggtcggacgggccggagtacgtgacgcagtgcccggtgaggcccgggcagagctaccggtatcgcttcacggtggcggcgcaggagggcaccctctggtggcacgcccactcctcctggctccgcgccaccgtctatggcgccctcctcatccgcccccgcgatggcaccagctaccccttcgacgtccagcccaccagagagctcgcccccatcctgctcggggagtggtgggacatgaaccccgtcgacgtggtgcgcgccgccacgcgcaccggcgctgctcccaacatctccgacgccctcaccgtcaacgcccagcccggcgacctctacagctgctcctcccacgacacggccgtcttccccgtcacctccggcgagaccaacctcctccgcttcatcaacgccgcgctcaacacggagctcttcgtctccctcgccggtcacaacatgaccgtcgtcgccgccgacgcctcctacaccaaaccgtacaccacctccctcctcctcctcgcccccggccagaccaccgacgtcctcgtcaccttcgaccaacctcccggccgctactacctcgccgcccgcgcctacgccagcgcccagggcgtccccttcgacaacaccaccaccaccgccatcttcgactacggcgccgccaacaacgcctccagcgccgccatcgccatgcctaccctcccggcgtacaacgacaccaccgccgccaccgccttcacgacgaacctgcgcggcctccgcaaggcggagctcccgtcgcgcgtggacgagagcctcttcttcaccgtcggcgtcggcctcttcaactgcaccaacgccacggcgcagcagtgcggcgggcccaacgggacgcggttcgcggcgagcatcaacaacgtctccttcgtgctcccctcctccacctccatcctccaggcgcaccaccacggcgcgcccggcggcgtgttcaccgccgacttcccggccaacccgccggtgcagttcgactacacggcgcagaacgtgagccgcgcgctgtggcagccggtggcgggcaccaaggtgtacaagctcaagtacggctccgccgtgcaggtggtgctccagggcaccaacatcttcgccggcgagaaccaccccatccacctccacggctacgacttctacatcctcgccgaggggttgggcaacttcgacgccggcgccgacacgggcaagttcaacgtggaggacccgccgatgaggaacacggtgggcgtgccggtgaacgggtgggcggtgatacggttcgtggcggacaacccgggggtgtggctgatgcactgccatctcgacgtgcacatcacctggggcctcgccatggccttcctcgtcgacgacggcgtcggcgagctgcagtcgctggaggcgcctccacccgacctgccgctctgctag</cdnaseq>

Protein Sequence

<aaseq>MTVNGQFPGPTLEINEGDSLIINLINRGRYNMTLHWHGVRQMRT GWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRATVYGALLIRPRDGT SYPFDVQPTRELAPILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCS SHDTAVFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKPYTTSLLLLA PGQTTDVLVTFDQPPGRYYLAARAYASAQGVPFDNTTTTAIFDYGAANNASSAAIAMP TLPAYNDTTAATAFTTNLRGLRKAELPSRVDESLFFTVGVGLFNCTNATAQQCGGPNG TRFAASINNVSFVLPSSTSILQAHHHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQ PVAGTKVYKLKYGSAVQVVLQGTNIFAGENHPIHLHGYDFYILAEGLGNFDAGADTGK FNVEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVDDGVGE LQSLEAPPPDLPLC</aaseq>

Gene Sequence

<dnaseqindica>1..358#3049..4259#atgacggtgaacggtcagttcccggggccgacgctggagataaacgaaggggactcgctgatcatcaacctgataaaccgtgggaggtacaacatgacgctgcactggcacggggtgcggcagatgaggacggggtggtcggacgggccggagtacgtgacgcagtgcccggtgaggcccgggcagagctaccggtatcgcttcacggtggcggcgcaggagggcaccctctggtggcacgcccactcctcctggctccgcgccaccgtctatggcgccctcctcatccgcccccgcgatggcaccagctaccccttcgacgtccagcccaccagagagctcgcccccatcctgctcggtacgtacgtttcttctgctacatgctttttaattattatctgtctcactattttggccgccaatttgtttagttaatttgacttctggtatttttctttttgcaatcgcatagcagatgcatacacgccgctacacgcacacacatgcttctatgttcttaacctcactgaaatcctaccggtttattctaacacattttgatcatgaatttattatggatgatatcgatctatatgtttatacatttgcaatgtagtacttaagtaatatggtttatttgttaatacctatgattttatctttaaagtataaatgttcacacacaaaaatgccaactcaaaattgcaaagtattatgaaatggagagagcatttttttttcaccactattgcctagctggatagtgtacacacattaccaaacctacaaaaaattgtgcaaccatcatcactgaaatttcacgcagccaatcacttacaggtcaaaaggtatgtcctggccgaaatgcaaaagatttataaagccaaagaaaaagaagatgcatttttatgcttcctctatatttttttttcatgatcaggaatagcatgccgcgagctaatgatagttatagcacattaatttattggaattaaattgatctcagagccacgattggtcggtcggtaccattgctatagtgtggggtcaagctgtcataatttagctgcttttcacgcatgttaacggctattaggccagtcacaatgggggtttcactggtgtgtcatgcacatttaataggggtaagactgaataaaaaatgattatttgcatgaaatggggatgagagagaaggaaagagtttcatcctggtgaaactcgtcagcgtcgtttccaagtcctcggtaacagagtgaaacccccgttgaggccgattcgtttcattcaccggatctcttgcgtccgcctccgccgtgcgacctccgcattctcccgcgccgcgccggattttgggtacaaatgatcccagcaacttgtatcaattaaatgctttgcttagtcttggaaacgtcaaagtgaaacccctccactgtggggattgtttcataaaagatttcatttgagagaagatggtataatattttgggtagccgtgcaatgacactagccattgtgactggccttatcattgttatcaaccacatcttcctttcatcagaaaaaaaaaaaacagctttctagccccttaggttggttggtaccagcttactacaagctgcttagctcaaagtcaaaacacatgcatgagtcagggcagggttaccaaacaagtaagcatcagtgtatcatagctttccaaagagccatacatgatctatctcaagaaaaagctagctaaccaatcatgtttatgtatcaaaaacttcatcattgtgcatgtttctcagatccttctttactcatcaatctgaattctggcgcaaaacttaaacatgcacatgctgcctatgcaaaattgatgctgaaagcatgctcaatgctcaatattcctcagagctagccagctacttttacaaacatttttatactcctacatgtacctgaaccttaagaactaagatatcatctttctcctacaaagtacatttgaggtttgtctcaaagttttgctccctaataattaagaaaatattctcaatgaatgtgcaatgcaaggttgcaatacatactttttatttgttaacaaaagaaggttgcattaaaagttatcaatttgtagagagatgcatacactagtctgaacatgtcaaaagtgaagaaaatgttcttaggagcatatgtcccattgtttgaaaaggttcgtcctcagtcctcaaaagtagaactttcggggaaaccacataatcaaaaattgcacaattcagccatttattcagaatgtcgttgtgagcttgtagccgacatggctcaatgtatagggttagctattcccttttgtatttttagtggttgaataagaggaattcgtatttttaagcaaaagaacatgttggtagttacaggggtcacttgagcacaagaaaaagacaaagattagttgaaggttgaatggttaatagttgatacactacaagtctgataagcaaaatggtttggtgctactgtactgctaattaaggccatggatttccatgttgcaaatccatgtttactctggcagtttggtacaattaacagaaggaatgtcactataccagcaggctcattacatgtttgattctcaataaattaaaatcagtaaaatcatattctctccggttaaaaatacggtatttttttcgcaaacgtgtaaaataattgcacgtcaatatattaaaagaaaaaagtttttgttatataacacaattagccataccagtttatatcaagagaagagagaaaaagaaaaacaaaagctgaagtggaaaaaacttctacagcggctaaacgcaactctgaacgttttaaaatacagtcaaactgatttatactaaaataagtttataaaatataattagtttacgatattataattttcaatgcaaatccacgtatatttttttaagaaaatctaagcatttttttaaaaaaaattaatgtttgaaatttaaaattttttatcaaatctgaggagttgagccctgaaacgtgtaaaattggttacaggggagtggtgggacatgaaccccgtcgacgtggtgcgcgccgccacgcgcaccggcgctgctcccaacatctccgacgccctcaccgtcaacgcccagcccggcgacctctacagctgctcctcccacgacacggccgtcttccccgtcacctccggcgagaccaacctcctccgcttcatcaacgccgcgctcaacacggagctcttcgtctccctcgccggtcacaacatgaccgtcgtcgccgccgacgcctcctacaccaaaccgtacaccacctccctcctcctcctcgcccccggccagaccaccgacgtcctcgtcaccttcgaccaacctcccggccgctactacctcgccgcccgcgcctacgccagcgcccagggcgtccccttcgacaacaccaccaccaccgccatcttcgactacggcgccgccaacaacgcctccagcgccgccatcgccatgcctaccctcccggcgtacaacgacaccaccgccgccaccgccttcacgacgaacctgcgcggcctccgcaaggcggagctcccgtcgcgcgtggacgagagcctcttcttcaccgtcggcgtcggcctcttcaactgcaccaacgccacggcgcagcagtgcggcgggcccaacgggacgcggttcgcggcgagcatcaacaacgtctccttcgtgctcccctcctccacctccatcctccaggcgcaccaccacggcgcgcccggcggcgtgttcaccgccgacttcccggccaacccgccggtgcagttcgactacacggcgcagaacgtgagccgcgcgctgtggcagccggtggcgggcaccaaggtgtacaagctcaagtacggctccgccgtgcaggtggtgctccagggcaccaacatcttcgccggcgagaaccaccccatccacctccacggctacgacttctacatcctcgccgaggggttgggcaacttcgacgccggcgccgacacgggcaagttcaacgtggaggacccgccgatgaggaacacggtgggcgtgccggtgaacgggtgggcggtgatacggttcgtggcggacaacccgggggtgtggctgatgcactgccatctcgacgtgcacatcacctggggcctcgccatggccttcctcgtcgacgacggcgtcggcgagctgcagtcgctggaggcgcctccacccgacctgccgctctgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0108700, RefSeq:Os11g0108700