BGIOSGA032744

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Revision as of 05:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032744| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032744, complete gene.| tag = OsI_331...")
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Gene Name

BGIOSGA032744

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032744, complete gene.

LocusTag

OsI_33174

Ensembl Transcript ID

BGIOSGA032744-TA

Ensembl Protein ID

BGIOSGA032744-PA

Length

4578

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:8739361..8743938

Sequence Coding Region

8739361..8739566,8739726..8741296,8741533..8742795,8743246..8743550,8743849..8743938

Genome Context

<gbrowseImage1> name=IndicaChromosome10:8739361..8743938 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:8739361..8743938 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTGGATGGGGATCCACCCCTGGAGGATGAGCATGAAGTAGTCCACTCTCAACTTCCAGAGATTGCCACCTCTCTGGAAGCGATGACAATCACACCAACAAAGGAGATCAGAGTGAGGTTGCAACAGTCTCCTGAAACGGCAACAGTTCAAGCCACTCACAATCTCCTCATGAAGGTTGGACATTCTGGAGGCCAGCAGAGTGATGTTTTTCTGCTTGAATGGGTTTCTTTGGATGAGAAAATTAAACCTATGTTAGCTTACACTTTCAAGCATCTTATGGTTAATGTGCGTATCTATGGCATTCCCCCAAGTCTTAGAAATGTTAAGAATGTCAAGTTGGCTGCTGAAAACATAGGTCAAATCTCAAAAGCTGAACCAATAGATCCAGATAGTTTGCTGAGGAATCAGAAATTTGTTTCTGTTAGAATCAGGATTGATGTGGAAAAACCAGTTCCTGATCATGTTATCTTGGAGCTTCCTGATAAATCTGAACTTAAAGCTTTTCTGCATTATGAAAGAAATCCCAGAATCTGTACTTTTTGTGGTCTCCTCTTCCATAATGTTCAGGTCTGTCCTCAAAGACAAAGAATTATCATTCAATTTCCAGATGCATCCGAGGAAGATCTTAAAGATAAACTGGGAAAGTGGATCACTCAGATCGATTATATGCCATCAGAGGCATTTTTGGATATGGAGGAATCCAACAAAAATTCAATTGTGGAAAAATTCAGGCAACATTTTTCTTCTCCTCAATTCAAGAACATTCAAGAACAGCAGAAGCAGCAAGAGAGAGGAAGTGAGACCAGCCAGTCATTAATGCCCAAGCTAGATTGGAAAAAAGCGAGTGAGAAAGCTTTGACTTTAGCTGGCTGTAGCACTGTTCAAGGGCCCCCAAGTCAAGCTGTTCACACTACCACAGCAGGCAAACAATGTGAGGAAAAAGACAAAGAACCTGATATACAAAGTACACCAGAAGTTGATACCGAAGAGATGTTGGTACATGGAAGTACAGAGAAAAAGAAGCTGGTTTCAAGTACTATAGAGGATCATGTCAGCTGCAACTCAAAGAATGTCAATACTGCTGGTAAGGTGCATCAGATGGAACCAGTCCAGTCTGTTCCATTGGTTCACCGAGTTTCACCCAGTGCAAGTGCCCATCAGAACAGTTTAGTTAACCCTGCTATTGGCACCAACGAAGTGCAACACAGAAGAAGCACAAGAGCTACCAAGATTTATGAGATAGCCTCACAACATTTAAGTAAGAAGAGAGGGTTTCATGAAGCAGCCCATGAATCTACCAAACGCCATTGCTCCCCAACTACTTCAGCTGCCTCTTCCTTCTCGATTGTGGGAGGTGAAGAACATGGAGGGATTGAATCAAGAAGAGCTTCTCCAACTAACCATTATTCAGCACCAATCAGGGTTCCAAGTAGAAGAGGTGGGCAGAGAGCTACAAGATGGGATCAGAGAGGAGGTTATGGTGGTGGAATGGTGACCTCCACTTCTTGGAGACCTCTTGCTGCTGCTCATTCTGATGTCATTCAAAGAGATGCTCCAAGATCCCCTCAAAGCATTAACAATTTTCATAGCAGGAAGCATACTTGGAGTGCTTTGGAGGTGCATCATGATATCTTTGTTGATCAAGCTGCTGGAGATACTCAAGGGGGTGGTGCAAGTGATGCTGGAGCTAGCTCCAGGCTGATACTGGCTACAGATCCTAGGGAATGCAATGTTTCAGAGATTCAGCTTGTTGATCCCAGTGCTGGAAACGCTAATAGTCATGTGGTTCCTGCTGATCAAGCTTCTGGTGGTCTGTGGCTGATGTGGGATGAAGACATGGATCTTACTATAGTTCAGTCTAGTGTTAATTATATCTTAGCTTATGGAGTCTATAAGAACTCTGGTCCTATTTTCAATCTTCTTTGTATTTATGGTGATCCTAGTCACAGGGCCACTAGTGCCATGTGGAGTGAAATCTCCTCTTTTGTTGTACATAGTAGTCACAGACCTACCTTTTGTATGGGAGACCTTAATGAGATCATGCATGCTAATGAAAAGTATGGTTTGGCCCCTCCTAATCAGAATCGTATTAATATTTTTAAGCATCATGTCAATAATCTGGGGCTTATGGATATGGGTTATAATGGTCCAGCTTACACTTGGTCCAATAAGCAACAGGGTAAGGATCTGGTTTTGGAAAGGTTGGACAGATGTCTTGCAAATGTGGAATGGTGTTTTAATTATCCAAATACCACTGTTTATCACTTGCCCATGTTGTATAGTGATCATGCTCCCATCATTGCCATTCTCAATCCGAAGAACAGGAGGCCTAAAAGATCTTTCATGTTTGAAAATTGGTGGCTGCTTGAACCAGATTTTAATCAGCATGCTCATTCAGCCTGGCTGCAGTCTGTAAACTGTCATTTTCAGAGAAGAACAACCTTGTTAGAAAGATCCTTAACCTCTTGGAGCAAAAAGAAGAAACCTCTTCAGCAGCAATTGGATCAGTTGGAAGAAGATCTGTTGAAAATTCAGAGTTCCCCCGACAGAGAACATTTGTACTTTGAGGAGAAAAGGATTGTGCAACAACATGATATTACTATGCAGAAGCTGGCCGATTATCACAAACAGAGAAGTAAGAAGCATTGGGTCCAGAAAGGTGACAGAAACACTTCTTTCTTTCAAAAAGCAACCCAGAAGAGAAGGAGAAAGAACAGAATCTCTAGTGTTATCCATAATAATTCAATAATCAATGATCCTGATGAGATAGCAACTGTCTTCACTTCTTACTTTGAAAATCTCTTTCAAAGCTCCAATACAGATGATGCCACTCCTTCTATGGATCAAAATGACAATGATGTAATTTTTCCTCCCCCTGAAATCCCTTCTGAAAATGACATCCTGGAAATTCTGAAGCAAATGCGAAGAGATGCCTCCCCAGGGCCAGATGGTCTCAATGTTGCATTTTATAGAGCTGCCTGGAATTGGATAAAAGACGATGTTACTGCCATGGTAGGCTCGTTCTATGAAACAGCTCATCGAGGTATTCGTCAAGGTTGTCCTTTATCGCCTTATCTTTTTGTCCTTGCGATTAATGAACTTTCTGACCAGCTTGCAGATGCAATTCAAAGGAACCACATTTCAGGAATAAAGTTAGGACAAAATGGTCCTTCCATTCATTCTCTGATGTTTGCAGATGATCTAATCATTGTGGGGCAGGCCCAACAAGAGGAAGTCAGGAAAACCTCTGAAATAATCAATTCCTTTTGTCTCAGATCAGGCCAGACTCCAAATTGGGGCAAATCTTCCATCCTGTTCAGCAAAAGTACTCCTGAAGAGGAATTCAAGCAGATGGTGGCAAAAAAGGAATGGCTCTTAGGTCTTGGAAAGACATTTGCAAACCTATTTCTGAGGGAGGCTTGGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MDLDGDPPLEDEHEVVHSQLPEIATSLEAMTITPTKEIRVRLQQSPETATVQATHNLLMKVGHSGGQQSDVFLLEWVSLDEKIKPMLAYTFKHLMVNVRIYGIPPSLRNVKNVKLAAENIGQISKAEPIDPDSLLRNQKFVSVRIRIDVEKPVPDHVILELPDKSELKAFLHYERNPRICTFCGLLFHNVQVCPQRQRIIIQFPDASEEDLKDKLGKWITQIDYMPSEAFLDMEESNKNSIVEKFRQHFSSPQFKNIQEQQKQQERGSETSQSLMPKLDWKKASEKALTLAGCSTVQGPPSQAVHTTTAGKQCEEKDKEPDIQSTPEVDTEEMLVHGSTEKKKLVSSTIEDHVSCNSKNVNTAGKVHQMEPVQSVPLVHRVSPSASAHQNSLVNPAIGTNEVQHRRSTRATKIYEIASQHLSKKRGFHEAAHESTKRHCSPTTSAASSFSIVGGEEHGGIESRRASPTNHYSAPIRVPSRRGGQRATRWDQRGGYGGGMVTSTSWRPLAAAHSDVIQRDAPRSPQSINNFHSRKHTWSALEVHHDIFVDQAAGDTQGGGASDAGASSRLILATDPRECNVSEIQLVDPSAGNANSHVVPADQASGGLWLMWDEDMDLTIVQSSVNYILAYGVYKNSGPIFNLLCIYGDPSHRATSAMWSEISSFVVHSSHRPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAWLQSVNCHFQRRTTLLERSLTSWSKKKKPLQQQLDQLEEDLLKIQSSPDREHLYFEEKRIVQQHDITMQKLADYHKQRSKKHWVQKGDRNTSFFQKATQKRRRKNRISSVIHNNSIINDPDEIATVFTSYFENLFQSSNTDDATPSMDQNDNDVIFPPPEIPSENDILEILKQMRRDASPGPDGLNVAFYRAAWNWIKDDVTAMVGSFYETAHRGIRQGCPLSPYLFVLAINELSDQLADAIQRNHISGIKLGQNGPSIHSLMFADDLIIVGQAQQEEVRKTSEIINSFCLRSGQTPNWGKSSILFSKSTPEEEFKQMVAKKEWLLGLGKTFANLFLREAWA</aaseq>

Gene Sequence

<dnaseqindica>1..206#366..1936#2173..3435#3886..4190#4489..4578#ATGGATCTGGATGGGGATCCACCCCTGGAGGATGAGCATGAAGTAGTCCACTCTCAACTTCCAGAGATTGCCACCTCTCTGGAAGCGATGACAATCACACCAACAAAGGAGATCAGAGTGAGGTTGCAACAGTCTCCTGAAACGGCAACAGTTCAAGCCACTCACAATCTCCTCATGAAGGTTGGACATTCTGGAGGCCAGCAGAGGTAGATCCCTTTGGAGGCTTTGAAGAAATCAATGGCAAAAGCTTGGCAAAGAGTTTATCTTGACATCTCTCAGGTAGAAAGCAATCTCTTTATGGCTCATTTTCGTAATTATGAAGATCTGTCCTGGGTTTGGTAAAAGCAACCGTGGTCTTTTGGCAGTGATGTTTTTCTGCTTGAATGGGTTTCTTTGGATGAGAAAATTAAACCTATGTTAGCTTACACTTTCAAGCATCTTATGGTTAATGTGCGTATCTATGGCATTCCCCCAAGTCTTAGAAATGTTAAGAATGTCAAGTTGGCTGCTGAAAACATAGGTCAAATCTCAAAAGCTGAACCAATAGATCCAGATAGTTTGCTGAGGAATCAGAAATTTGTTTCTGTTAGAATCAGGATTGATGTGGAAAAACCAGTTCCTGATCATGTTATCTTGGAGCTTCCTGATAAATCTGAACTTAAAGCTTTTCTGCATTATGAAAGAAATCCCAGAATCTGTACTTTTTGTGGTCTCCTCTTCCATAATGTTCAGGTCTGTCCTCAAAGACAAAGAATTATCATTCAATTTCCAGATGCATCCGAGGAAGATCTTAAAGATAAACTGGGAAAGTGGATCACTCAGATCGATTATATGCCATCAGAGGCATTTTTGGATATGGAGGAATCCAACAAAAATTCAATTGTGGAAAAATTCAGGCAACATTTTTCTTCTCCTCAATTCAAGAACATTCAAGAACAGCAGAAGCAGCAAGAGAGAGGAAGTGAGACCAGCCAGTCATTAATGCCCAAGCTAGATTGGAAAAAAGCGAGTGAGAAAGCTTTGACTTTAGCTGGCTGTAGCACTGTTCAAGGGCCCCCAAGTCAAGCTGTTCACACTACCACAGCAGGCAAACAATGTGAGGAAAAAGACAAAGAACCTGATATACAAAGTACACCAGAAGTTGATACCGAAGAGATGTTGGTACATGGAAGTACAGAGAAAAAGAAGCTGGTTTCAAGTACTATAGAGGATCATGTCAGCTGCAACTCAAAGAATGTCAATACTGCTGGTAAGGTGCATCAGATGGAACCAGTCCAGTCTGTTCCATTGGTTCACCGAGTTTCACCCAGTGCAAGTGCCCATCAGAACAGTTTAGTTAACCCTGCTATTGGCACCAACGAAGTGCAACACAGAAGAAGCACAAGAGCTACCAAGATTTATGAGATAGCCTCACAACATTTAAGTAAGAAGAGAGGGTTTCATGAAGCAGCCCATGAATCTACCAAACGCCATTGCTCCCCAACTACTTCAGCTGCCTCTTCCTTCTCGATTGTGGGAGGTGAAGAACATGGAGGGATTGAATCAAGAAGAGCTTCTCCAACTAACCATTATTCAGCACCAATCAGGGTTCCAAGTAGAAGAGGTGGGCAGAGAGCTACAAGATGGGATCAGAGAGGAGGTTATGGTGGTGGAATGGTGACCTCCACTTCTTGGAGACCTCTTGCTGCTGCTCATTCTGATGTCATTCAAAGAGATGCTCCAAGATCCCCTCAAAGCATTAACAATTTTCATAGCAGGAAGCATACTTGGAGTGCTTTGGAGGTGCATCATGATATCTTTGTTGATCAAGCTGCTGGAGATACTCAAGGGGGTGGTGCAAGTGATGCTGGAGCTAGCTCCAGGCTGATACTGGCTACAGATCCTAGGGAATGCAATGTTTCAGAGATTCAGCTTGTTGATCCCAGTGCTGGAAACGGTGGAGATGGAAGTGGAAAGAATGATGGATGGGCAATGGCGCCAGCCCATAAGGCGTCAAGGGCGCCATGAGTCTTTTAAGCTGGAACTGCCGAGGTATGGGGGGTCACCTCGGCAGTAGGAAAATGCAACACCTCCAACGCCTAATATACTCTACTAATGCTAAGGTAATCTTTATTTCAGAAACAAAAAGCTCTAAAGTCACTGCTTCTGATCTGATCCATCATTTTCATGTAGCTAATAGTCATGTGGTTCCTGCTGATCAAGCTTCTGGTGGTCTGTGGCTGATGTGGGATGAAGACATGGATCTTACTATAGTTCAGTCTAGTGTTAATTATATCTTAGCTTATGGAGTCTATAAGAACTCTGGTCCTATTTTCAATCTTCTTTGTATTTATGGTGATCCTAGTCACAGGGCCACTAGTGCCATGTGGAGTGAAATCTCCTCTTTTGTTGTACATAGTAGTCACAGACCTACCTTTTGTATGGGAGACCTTAATGAGATCATGCATGCTAATGAAAAGTATGGTTTGGCCCCTCCTAATCAGAATCGTATTAATATTTTTAAGCATCATGTCAATAATCTGGGGCTTATGGATATGGGTTATAATGGTCCAGCTTACACTTGGTCCAATAAGCAACAGGGTAAGGATCTGGTTTTGGAAAGGTTGGACAGATGTCTTGCAAATGTGGAATGGTGTTTTAATTATCCAAATACCACTGTTTATCACTTGCCCATGTTGTATAGTGATCATGCTCCCATCATTGCCATTCTCAATCCGAAGAACAGGAGGCCTAAAAGATCTTTCATGTTTGAAAATTGGTGGCTGCTTGAACCAGATTTTAATCAGCATGCTCATTCAGCCTGGCTGCAGTCTGTAAACTGTCATTTTCAGAGAAGAACAACCTTGTTAGAAAGATCCTTAACCTCTTGGAGCAAAAAGAAGAAACCTCTTCAGCAGCAATTGGATCAGTTGGAAGAAGATCTGTTGAAAATTCAGAGTTCCCCCGACAGAGAACATTTGTACTTTGAGGAGAAAAGGATTGTGCAACAACATGATATTACTATGCAGAAGCTGGCCGATTATCACAAACAGAGAAGTAAGAAGCATTGGGTCCAGAAAGGTGACAGAAACACTTCTTTCTTTCAAAAAGCAACCCAGAAGAGAAGGAGAAAGAACAGAATCTCTAGTGTTATCCATAATAATTCAATAATCAATGATCCTGATGAGATAGCAACTGTCTTCACTTCTTACTTTGAAAATCTCTTTCAAAGCTCCAATACAGATGATGCCACTCCTTCTATGGATCAAAATGACAATGATGTAATTTTTCCTCCCCCTGAAATCCCTTCTGAAAATGACATCCTGGAAATTCTGAAGCAAATGCGAAGAGATGCCTCCCCAGGGCCAGATGGTCTCAATGTTGCATTTTATAGAGCTGCCTGGAATTGGATAAAAGACGATGTTACTGCCATGGTAGGCTCGTTCTATGAAACAGGTAAGCTTCAATCAGGTATGAATGCTACTAATATTGTTCTTGTTCCTAAAAATTCTAATCCTAAGTCCCCTGCTGATTTTAGACCCATTAGCCTTTGTAATGTTTCTTATAAAATCATTGCTAAGTCCTTGGCTAATTACATTCAGAATAAACTTCCTAACCTTATTTGTAACACTCAGCAAGCTTTTGTCAAGGGGAGACGCATCTCTAATAATATTGTGTTTGCTCAGGAAATTGCTCACTCTTTTAATCTCACCTCTTTTAATCAAAAAGCTTTTCTTTTAAAAATAGACTTGTCTAAAGCTTTTGACAGGATTGAATGGAGATTCATAGCGGACGCTCTTTGTCGTAAAGGGTTTCATGCTAATTTCGTTCGTCTTGTTTTTTCCTGCATCAACTCTGCTAATTTTTCTGTTGTTATAAATGGTCAATCGTACGGGTACTTTTCAGCTCATCGAGGTATTCGTCAAGGTTGTCCTTTATCGCCTTATCTTTTTGTCCTTGCGATTAATGAACTTTCTGACCAGCTTGCAGATGCAATTCAAAGGAACCACATTTCAGGAATAAAGTTAGGACAAAATGGTCCTTCCATTCATTCTCTGATGTTTGCAGATGATCTAATCATTGTGGGGCAGGCCCAACAAGAGGAAGTCAGGAAAACCTCTGAAATAATCAATTCCTTTTGTCTCAGATCAGGCCAGACTCCAAATTGGGGCAAATCTTCCATCCTGTTCAGCAAAAGTACTCCTGAAGAGGTAAGACAAAATATTCTTACAATTTTTCCTGTTTCTCTTATGAACTCCAGCACAAAGCATCTAGGGCATCCTCTTCTGGTGAGTACAAAAGACAGAAATGCTGCCTACAGTTTCATTGTCGACAAGTTTAAAAGCAAGCTTACTACTTACAAAGCTAATTCTCTTTCTCATGCAGGTAGGCTTGCCCTCATTAAATCTGTCTTTGCTTCCATTCCTATTTATTACATGTCCATCATGCTTTTCTCAAAAAAATTGATTGCTAAACTAACTGCTATTATAAGGAAATTTTGGTGGACAGGAATTCAAGCAGATGGTGGCAAAAAAGGAATGGCTCTTAGGTCTTGGAAAGACATTTGCAAACCTATTTCTGAGGGAGGCTTGGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032744