Os11g0109600

From RiceWiki
Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0109600| Description = Protein of unknown function Cys-rich family protein| Version = NM_001072086.2 GI:297611063 GeneID:4349572| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0109600

Description

Protein of unknown function Cys-rich family protein

Version

NM_001072086.2 GI:297611063 GeneID:4349572

Length

3891 bp

Definition

Oryza sativa Japonica Group Os11g0109600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:444991..448881

Sequence Coding Region

444991..446908,447425..448881

Expression

GEO Profiles:Os11g0109600

Genome Context

<gbrowseImage1> name=NC_008404:444991..448881 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:444991..448881 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaccacaagaacagcatcaagaaccagtgaacgatgggctgcagaagcaggagcagcacaagaagcacaaggagaagaagaaggagaggctcctcgacttcctccgggcagcgccgtccaaggcgccatggttctccttctccggcgccgccttcctcacccgcctcgcctccctccgcaccacaaacaatcctgctgcttcccgccgcttgccggcgttcgtccgctccgtcgactggcgcgccctccgcgccaagtgcctcgcgtgggccaagcacccaatgaacgcggctctgctcatctggctcgccttcgtcgccggcggcgtcgccttcgtcttcctcctcatgaccggcgcgctcaactccgccgtgcccgccgcctcgcgccgccgccgatggaccgaggtggccaaccagatgctcaacgcgctcttcaccatcatgtgcgtctaccagcatcccaagctctgccaccacctcgcgctactcctccgatggcgcgccgccgacgtcgccgagctccgtgccctctactgcaagaacggcgccgccggcctgcgccgcgagcgcctccacgtggccgccgtcgtgctgctgttccacgccacgtgcttcgcgcagtacggctactgcgcgctcttctggttcttcggaagagacaaccgcccggacttggccgtcaacctctgcatggcgctcggcctcggcttccccatcgtcgccgccttgtacatggtgtacggcccgctcggccggaagatcgtgctgatcccggcgtccaccgacgacgaggagaacttgaactcgcaggtcgacgaggcgaacgcgatcgcggtgacggcgcagtgtgacagcaacagaaacagggcggtggtcgcgaagccggagtgggccggcgggctgttcgacgtcggcgacgacccgacggtggcggcgctgtcgctgtcgtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgtgcacgtcttcacgttcgcgctgctgtgcgcggcgccggtgctggtgttcgcggtggcggcgctcaacgtccacgacgacacgctgcggttcgtcgtgggcgccgcgggcgccttgctgtccgtgctgggcctcacgtacggcgggttctggcgcgcgcagatgcggaggcgcttcgggctgccagcgcaccgctggtccatgtgcggcgggcgggccacggcggcggactacggcaagtggctgtgctgcgcgccgtgcgcgctggcgcaggaggtgaggacggccaacctgtacgacgtggaggaggacgtgctgtacgccaaaggtggcgaggaggaggaggaggaggaggcggcaatggcgcctttggagagagaaggctgcatcgtcgccgttgatgcgccgccgctaccgatgagagtcgaagagaaggactatgtcgtgcggctactcctcgccggcgtcgcccctagcaaccgcctcccgccgctcaccgtcaagctcctccacgcccgcctcctccgcctcgacctcctcgctggcctctcctcgctcctcctccgcgccctcacctcctccgcccttcacctccacgcgctccgcgtccactgcctcctccccaacccctcccacctcaccatccccatcgccctcaagtcggcctcccgccttccgcaccctctccgcgcgggcgagcagctccacgcgcgctccctcaagcttccctcccacaccaacccccacgtcctcacctccctcctcagcctatacgcaaaatgcggcctcctacatcgagcccagagggtgttcgacgaaatgccacaccccagcaccgtcccctggaccgctctcatcactgcctacatggatgctggggacctcagggaagccgtccatgtcgcaaggaatgcttttgcgaatggtatgcgaccggacagcttcacggccgtgcgtgtcctgactgcgtgtgctcggattgcggatttggcaactggggagactgtttggagggctgccgagcaggagggcgttgcacagagcgtgttcgtggccactgcggcggtagatttgtatgtcaagtgtggggagatggcaaaggcaagggaggtgtttgacaagatgcggcacaaggatgcagtggcctggggcgccatggttgggggatatgcttccaacggccacccacgagaggctctggaccttttccttgcaatgcaggcagagggaatgaagccagattgctatgcagtagctggggcgctatcagcctgcacaaggttgggtgcattggatctgggacggcaggcaatcaggatggtggactgggatgagtttcttgacaatccagtcctagggactgcattgattgatatgtacgccaagtgtgggagcacggtcgaggcatgggtggtgttccagcaaatgaggaagaaggacattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattgcatttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttcattggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttccataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcgatctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaatgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaacacggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctgggaactatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagcttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagtttgaaggtaaggtccatgaattccgtgtcggagacaagtcgcatcctctttcagatcagatttacaaaaagctcgacgaattaggattggaaatgaaaaccatgggttatgaaccaacaacagaagtggtgatgtttgatgttgaagatgaagagaaggagcacacactagtgcatcatagtgagaaactagcaattgcatttaaccttctcatcactggaccaggggagaccattagggtcaccaagaacctcagagtttgcagtgactgtcacactgcaattaaactcgtatcgaggataactcatcgggagatcattgtccgagataacaatcgatttcattgttttagagatggttcttgctcctgcaatgactattggtag</cdnaseq>

Protein Sequence

<aaseq>MEPQEQHQEPVNDGLQKQEQHKKHKEKKKERLLDFLRAAPSKAP WFSFSGAAFLTRLASLRTTNNPAASRRLPAFVRSVDWRALRAKCLAWAKHPMNAALLI WLAFVAGGVAFVFLLMTGALNSAVPAASRRRRWTEVANQMLNALFTIMCVYQHPKLCH HLALLLRWRAADVAELRALYCKNGAAGLRRERLHVAAVVLLFHATCFAQYGYCALFWF FGRDNRPDLAVNLCMALGLGFPIVAALYMVYGPLGRKIVLIPASTDDEENLNSQVDEA NAIAVTAQCDSNRNRAVVAKPEWAGGLFDVGDDPTVAALSLSCTFCVFGWNMERLGLG NMYVHVFTFALLCAAPVLVFAVAALNVHDDTLRFVVGAAGALLSVLGLTYGGFWRAQM RRRFGLPAHRWSMCGGRATAADYGKWLCCAPCALAQEVRTANLYDVEEDVLYAKGGEE EEEEEAAMAPLEREGCIVAVDAPPLPMRVEEKDYVVRLLLAGVAPSNRLPPLTVKLLH ARLLRLDLLAGLSSLLLRALTSSALHLHALRVHCLLPNPSHLTIPIALKSASRLPHPL RAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGV AQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA KCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTF IGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD MPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWE DAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW</aaseq>

Gene Sequence

<dnaseqindica>1974..3891#1..1457#atggaaccacaagaacagcatcaagaaccagtgaacgatgggctgcagaagcaggagcagcacaagaagcacaaggagaagaagaaggagaggctcctcgacttcctccgggcagcgccgtccaaggcgccatggttctccttctccggcgccgccttcctcacccgcctcgcctccctccgcaccacaaacaatcctgctgcttcccgccgcttgccggcgttcgtccgctccgtcgactggcgcgccctccgcgccaagtgcctcgcgtgggccaagcacccaatgaacgcggctctgctcatctggctcgccttcgtcgccggcggcgtcgccttcgtcttcctcctcatgaccggcgcgctcaactccgccgtgcccgccgcctcgcgccgccgccgatggaccgaggtggccaaccagatgctcaacgcgctcttcaccatcatgtgcgtctaccagcatcccaagctctgccaccacctcgcgctactcctccgatggcgcgccgccgacgtcgccgagctccgtgccctctactgcaagaacggcgccgccggcctgcgccgcgagcgcctccacgtggccgccgtcgtgctgctgttccacgccacgtgcttcgcgcagtacggctactgcgcgctcttctggttcttcggaagagacaaccgcccggacttggccgtcaacctctgcatggcgctcggcctcggcttccccatcgtcgccgccttgtacatggtgtacggcccgctcggccggaagatcgtgctgatcccggcgtccaccgacgacgaggagaacttgaactcgcaggtcgacgaggcgaacgcgatcgcggtgacggcgcagtgtgacagcaacagaaacagggcggtggtcgcgaagccggagtgggccggcgggctgttcgacgtcggcgacgacccgacggtggcggcgctgtcgctgtcgtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgtgcacgtcttcacgttcgcgctgctgtgcgcggcgccggtgctggtgttcgcggtggcggcgctcaacgtccacgacgacacgctgcggttcgtcgtgggcgccgcgggcgccttgctgtccgtgctgggcctcacgtacggcgggttctggcgcgcgcagatgcggaggcgcttcgggctgccagcgcaccgctggtccatgtgcggcgggcgggccacggcggcggactacggcaagtggctgtgctgcgcgccgtgcgcgctggcgcaggaggtgaggacggccaacctgtacgacgtggaggaggacgtgctgtacgccaaaggtggcgaggaggaggaggaggaggaggcggcaatggcgcctttggagagagaaggctgcatcgtcgccgttgatgcgccgccgctaccgatgagagtcgaagagaaggactatgtcgtgttagacatgggtcaatgaaatttcgttccaagatcaaaataggcaacatgtaaaaattccgatctgctctttttttttcttcattatttgaagagatattccaatatttgactaaatttgttcattcgttgactgcttggctttggcgctttatttagacccggtttatataccattttagaaattttcaccctgtcatatcaaacgtttgaacaactgcataaatgattaaatataggttaaaaacaactaattgcacaaattgcaactaatttacaggatgaatcttttaaacctaattattacatgatttgacaatggagtgctatagtaagcattcgctaataacagattaattatgcttaataaatcatcgtgcggtttactgacagattttataattagtttttttatcaatgctacgacactctatataataggcgatgaaacaagaaaatttttttttacaccctatatccaaacacccccttatttatgtctggcgatgccatcaggcggctactcctcgccggcgtcgcccctagcaaccgcctcccgccgctcaccgtcaagctcctccacgcccgcctcctccgcctcgacctcctcgctggcctctcctcgctcctcctccgcgccctcacctcctccgcccttcacctccacgcgctccgcgtccactgcctcctccccaacccctcccacctcaccatccccatcgccctcaagtcggcctcccgccttccgcaccctctccgcgcgggcgagcagctccacgcgcgctccctcaagcttccctcccacaccaacccccacgtcctcacctccctcctcagcctatacgcaaaatgcggcctcctacatcgagcccagagggtgttcgacgaaatgccacaccccagcaccgtcccctggaccgctctcatcactgcctacatggatgctggggacctcagggaagccgtccatgtcgcaaggaatgcttttgcgaatggtatgcgaccggacagcttcacggccgtgcgtgtcctgactgcgtgtgctcggattgcggatttggcaactggggagactgtttggagggctgccgagcaggagggcgttgcacagagcgtgttcgtggccactgcggcggtagatttgtatgtcaagtgtggggagatggcaaaggcaagggaggtgtttgacaagatgcggcacaaggatgcagtggcctggggcgccatggttgggggatatgcttccaacggccacccacgagaggctctggaccttttccttgcaatgcaggcagagggaatgaagccagattgctatgcagtagctggggcgctatcagcctgcacaaggttgggtgcattggatctgggacggcaggcaatcaggatggtggactgggatgagtttcttgacaatccagtcctagggactgcattgattgatatgtacgccaagtgtgggagcacggtcgaggcatgggtggtgttccagcaaatgaggaagaaggacattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattgcatttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttcattggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttccataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcgatctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaatgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaacacggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctgggaactatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagcttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagtttgaaggtaaggtccatgaattccgtgtcggagacaagtcgcatcctctttcagatcagatttacaaaaagctcgacgaattaggattggaaatgaaaaccatgggttatgaaccaacaacagaagtggtgatgtttgatgttgaagatgaagagaaggagcacacactagtgcatcatagtgagaaactagcaattgcatttaaccttctcatcactggaccaggggagaccattagggtcaccaagaacctcagagtttgcagtgactgtcacactgcaattaaactcgtatcgaggataactcatcgggagatcattgtccgagataacaatcgatttcattgttttagagatggttcttgctcctgcaatgactattggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0109600, RefSeq:Os11g0109600