Os11g0109900

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Gene Name

Os11g0109900

Description

Double-stranded RNA binding domain containing protein

Version

NM_001072089.1 GI:115483790 GeneID:4349575

Length

4484 bp

Definition

Oryza sativa Japonica Group Os11g0109900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:456198..460681

Sequence Coding Region

456522..457390,457535..457748,459925..460184,460520..460598

Expression

GEO Profiles:Os11g0109900

Genome Context

<gbrowseImage1> name=NC_008404:456198..460681 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:456198..460681 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatgccgcccacgccccttccgccggagaccgccaacacctcgcccgctcccaacggcgccaccgccggaatcagggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccataccagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaatcagcctcaggcttagctcctttcatatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaagatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtcaatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgtggaaaaggatgaagctagagtggctggagatgctcacgattctgacgtcctaatgcagccaacagtaataacacaggaggcatcttgtggcactctgttccttcaaccttgtgaggaagctaaaagagtagaagctgagccacctagagatattgaaatggtacaacctgataaggagaaccaacacagtgacgctgcattggtgcaacctgatgatgaagctagagtagaacaggagccatccagagatatttcagtggtgccacctaatgaggaagctataagtgttaagcaggaaccatccatcgatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatcgatactgcaatgctgcaagcttgtaaggaagctggaagtgtagaacttgggccagccagagatactgtaatttctcaacttaatgagcaagataggggtgtaaagcaggagccagctggtgacactgcagtgccacaacctgacgtggacgctagggtcgtaaaggaggagtcaccaagaacggaacctaatggggaagctacgaacatgaaggagacaccaaagaactctgcagtgtgtaattctccagagacaaaggaatttggagatattacagcaatgggttcagatcctcccgcaactaatatgagcgaagaataa</cdnaseq>

Protein Sequence

<aaseq>MDMPPTPLPPETANTSPAPNGATAGIRVENCYVFKSRLQEYAQK AGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVK SIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQY IGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVPGKRVGKEVEKMPIETPK PLKIKKGGFKKKWNKRKFMKKDGQAVVEKDEARVAGDAHDSDVLMQPTVITQEASCGT LFLQPCEEAKRVEAEPPRDIEMVQPDKENQHSDAALVQPDDEARVEQEPSRDISVVPP NEEAISVKQEPSIDAAILQPKEEASSVKQEPFIDTAMLQACKEAGSVELGPARDTVIS QLNEQDRGVKQEPAGDTAVPQPDVDARVVKEESPRTEPNGEATNMKETPKNSAVCNSP ETKEFGDITAMGSDPPATNMSEE</aaseq>

Gene Sequence

<dnaseqindica>3292..4160#2934..3147#498..757#84..162#atcgcaccacgcacacaaccaaaacccttctcttctctctcgactctcgacgacgctgcggcggcggtggcggcgaggtgggaatggacatgccgcccacgccccttccgccggagaccgccaacacctcgcccgctcccaacggcgccaccgccggaatcagtatgtttctctctctcccccctccctctcaacactcttctttggtctcaacaagaaccaagggaggactgttcattccaacgagctaaccgcaggttttggttcctctccactttttaaatggaaattgctttactggagagcattcaccatcatacatgatgcattgatgcgcctgggatgtaactactactacatttgttgccgaaacattacttgcattattatgtcatcttgatagagagctggttgctgggacgaaatctcaaaaattgctcttcccggcatcgtggtaatgctattttctgagttgtggtatgcttgatttggcccaggggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccataccagccaacgcaaacatcccagctgttgtaagtcactgtctgctctacttgtgtttttgtttaactcaacatgatggaatacctggggcctgggaggacctgctggtgtagtacaagattagtaaaagtgttgggatagtctacttatttctatacagtgcctgcttttgaattcgcgcgaatccgaagaatgagatagccactcacctgataactccagaacgaatcagggctttcatgtttggatagagttaggtcctagagagcaagaagagagggtatttgcatagaagagattgtgaaagctttgctgtcagtcaccacggtcttattattatctgccgtcatgatctgtctgtatcttttcaggctcataattctactcaggtattatatgaatataacaggaaattggttgttaaagagcttctgaactcactcttccccggtttgtgaaccatgaacaatgcaaacatcaaagtacacatattaagttttgtgatcatttccgagtccaagacctagataattttgatgctcttttggtcgagtccctaggaattaacgcctgactaaattagcatagtgctataatctcttacctggattctatgttcttgacacaccttaatatgttttccagcaagagactggcctgtgcaacacaggaagtcagcaactgaacctgagggaaatgcaccgagaagctgaccaccaccaccgccttctggcaacccttgcacgccactgccgtcttgctgccgctgccaccttcttctcctccaccctccgcactgctcgtgccctcaactccctcctcgctgctatctgctcttccccagcgttcctccgctttgcccctaaagtcctcttgctcgctgccccatcagtctcccctgatgcgaccaccttccacatcctcatctccacactctgccaggcccaccgccccgctgctgccgccgacctcctttgctgcatgccctcgcttcttcttgaccctgacctggccagttgtcgtgctgtcctctcctccctgtgccagtacgcttccgctcaggatgcagtagcattcttggacaagatgtgccattggggcatttccccaagcagatctgactaccacgccgtcttcgatgcgcttctgcaggagggaaaggtagcggaggcatatgaggtcatgaagaataagatgggctctaacagggtggcacctgcacttgcatacttcaaattgacaatgcaagctttcagcgagtgcttggagttcgattctgtggaggaggtgtttgatgaaatgctcctgagagggctggtaccagacgtggatgtgtatagtgtgtacatcagcgcgctatgtaggaaaggtgaccttgccggagcgcggcagatgatgacctgcatggagcacgccgggtgcccaccggatgtaaggacatttggtgtggtagtcgccgggtgcatgtctgccggggacatgggcacagtgagggagttggtgcaggaggcaataaggcgtggcctgcagtgggatccaccagcattgtcggagctgataggcttgctgcaggcaggtgatggtgccacacagtcacaggagttactgttggagccactatttgtgcacgatgcaccagtgttggggcagctgattggagcattgtgcaagcaagggctattgggacctgctgctgtagtagatgattattagaaagcattgtaattgtctttttgtttcaaactttcaatacagttgttggttttgaattctcagaaatctgaagaacggcataagaattataaaaacagagacagaaaaggcaaaccatggactataactccaggaatactcagagctttcggctttgtagatcactagattgtcggctaaagttaggacccagtgagcaagaagggagggtatttgtatagatcggccaggtaggagattgcagaaagtctttattgttgtcttctgtcatgatttatttgtattttctcaagcttacaactctactaggttattcccatgaatacaataggaaattagtcgtttaatagctactgaactcgtactgccaggatttagataatttggatgttctttagttcttaggaatcaggctgactaaacttagcatagtgttataatctctttcctggatcactgtgcatttttttacacatattaatatgttttcagcaagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaatcagcctcaggcttagctcctttcatatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaagatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtattgttctgttcttctctaagggtcttatttttattttttatattatccaggctattcactgttaaaattaacattgctatgttcttgtttgtgtgttattatggtgaacattgggtcatgcatgggcattgcttggtgcaggtcaatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgtggaaaaggatgaagctagagtggctggagatgctcacgattctgacgtcctaatgcagccaacagtaataacacaggaggcatcttgtggcactctgttccttcaaccttgtgaggaagctaaaagagtagaagctgagccacctagagatattgaaatggtacaacctgataaggagaaccaacacagtgacgctgcattggtgcaacctgatgatgaagctagagtagaacaggagccatccagagatatttcagtggtgccacctaatgaggaagctataagtgttaagcaggaaccatccatcgatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatcgatactgcaatgctgcaagcttgtaaggaagctggaagtgtagaacttgggccagccagagatactgtaatttctcaacttaatgagcaagataggggtgtaaagcaggagccagctggtgacactgcagtgccacaacctgacgtggacgctagggtcgtaaaggaggagtcaccaagaacggaacctaatggggaagctacgaacatgaaggagacaccaaagaactctgcagtgtgtaattctccagagacaaaggaatttggagatattacagcaatgggttcagatcctcccgcaactaatatgagcgaagaataagctgtggttgttgaatcaaaatgcaatagctttagtgtgttcacctgcagagggcgaagaataagctgcggttgttgaatcaaaatgcaatagccttagtgtgttcacctgcagaggtgtgaaacatgaatggctggcttttccagtttaaaaagaggcagctggaataggaagatgtatgtgggctgagaatagttagttcatatttgtcattgttagctaggcatgtgtatgcctgatgatatgaatgaaatgtattacctgctgctttagtgagcactactttgaaaagaaggggaaaaaatgaattcgaggtttctgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0109900, RefSeq:Os11g0109900