BGIOSGA032842

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Revision as of 05:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032842| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032842, complete gene.| tag = OsI_334...")
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Gene Name

BGIOSGA032842

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032842, complete gene.

LocusTag

OsI_33408

Ensembl Transcript ID

BGIOSGA032842-TA

Ensembl Protein ID

BGIOSGA032842-PA

Length

4459

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11226771..11231229

Sequence Coding Region

11226771..11226839,11226917..11226979,11227100..11227159,11227276..11227902,11227996..11228169
,11228261..11228582,11228678..11228788,11228870..11228940,11229121..11229169
,11229249..11229320,11229422..11229618,11230881..11231173,11231223..11231229

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11226771..11231229 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11226771..11231229 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCTATGCATAAATCAAGGCTTGGCAAAGCTCCTATTGTTATTGACTCCGATGACTCTGATGATGATGATCAAGAGCATGATAGTACAAAATTTGATGATTTCATTCTTGGAATGCAGAGGAAATTGATTGTTCAAGATGTGATGAAGGAACTGATGTCCAAATCTTATGTTTTGCCAAAGCCTCATGTGAAGAAACAAAAGGCTCATGCTAATGCAGAATCGTCTTTCACAAGATTCTCTATCAGATATTTTTCAGATGTTATTTCCAAGTCATCTGACTATCACAAGTCCATCATCCACAAATATGAGTTTGATTTTTTGTTATTGTTTGAGAGCAACTCTGTTCCTGTCAAATTTGCATCTTGGATTGTTAAACATGTCGATGTCAGGACTTCTGAAATAATTCTAAATGACAAAATTATCCCAGTAACAGTTGAATCAGTGCACGCTGTTCTCGGTGTTCCTTTAAGTGGAATAGAATTCAGCAAAGATTATGAAGCTGGCAGGCAATATGTCATGTATATGTTTGGTCAGGATGCTATTCCTTCGGTTAAATTTTTTGGAGATCTACTAATTCAGAAGAAAGACTTGTCTGAAGATCAAATAATCACCTCTTTCCTTACTGTTGCCTTGGCTTGCTTTTTATGCCCCAACTCATCTTTGATCCCAAGTGTCAAGTATTTGACTATCTTCGAGGATGCTAACCTGTTGAAAAGCTATGATTGGTCAAAATTTGTGTATGAATGGCTGATGACATATGCTAAGAAGTTTCAGAAGAACAACACCATTGGAGGTTGCTTGTTTTACTGGGCTGCTCTGTATCTTGATAACGTTGATTTTGGCTCAAGATATATTGACCAAGGTTTGCCTCGCATTTCTGTTTGGAAGGATGACATGATTTCAGTATTCTCTGACTTAGACAAAATAGATGATAACACCTTTGGACTAAGGCCTCTCAAGGATTTCCGAGCAACATGCTATTTTCAGCCCAAACCTACACATTCTAGGTCAAATGCAATTAGAGCTAAACTAGATTCAGCCATTGGCAGTATGATTCCAGATTGTCTCAAGGAGAAAATTTCTGAATTGTTGAGTAGCCATTTCTGCAGTCACCATGTACTTGACAGTGAGCCATGTGAAGATATATTGATTTCTATATTGGCTTTACTTGCTGAATCAAGTCAATTTCATCCACTAGAAGTTCCAACAACCCATATCTCTCCTCAAATAAACACTGAAGCTGGACCTAGTAACCGTGAACCTACAAGTCCAAAAGCAAGGCAATCTGATTTTTGTGTTTTAAATGATGATGGTGTTCGATCTCCTGCTAAACACACCAGTTTAAGCAATGTTGAATTGTATGAGAAATCTGTTTCAAGATCTACTGGAAAGGGCTGTACATCTATTGATAGAATCGCAGATTTATATGGTTCTATAGCCAACTGCGATGATGACAGCATGTTGCTGAATAAACTGTCAGCACACCCCAAGGCTGTCGTTACTCCTTGTGGTAATGCTAATGCTTCAAGCTCTCATGAAGATGAACCTTTGTTGACTCCAGATGTTGCATATTTGAGAACTAGGAACAACATTTTGAATGAAACTAATGAAGGTCCTTCTTTTGCTGCTCTCAGCCTTGTCAAGAATGTTGCAAATAAGTTTAGGTCCAGAATAACACATTTCAATAGTAGAACTCCTTTTTTGGGCGAAGAAATGCCATCATTTAAGTTGTTAGATTCAGATGATGATATTAGTGATTGTGACAAAGAGAATGAAGTTGCTGAAGCTATAACACCTGCTTGTTCTCAGAATTCTCCTGAAGTTCAGTTTCTTGGCGAGTCAAAATTTAATGATCGTTGTAAGAAAATGTGCACAAAGACAGATGAATTATACAATGCATCCAATAATTTGTCTACAAGCAATCAAAGGTTCAGTTCCACTGGTTGCAAGTTACCATTATATGGTCCACGGAGAGTATTGGTTCCTGCCAGACATGCAATAGATCCCTTTGTTATTGATAGACCTCGTTTTACAGTCACTGATGAAGAAAATCGATACTTCATTGCTCTTTGTCAACTTGCTGAGAGTTCCAAGTGGCAAAGCTATTGA</cdnaseq>

Protein Sequence

<aaseq>MAPMHKSRLGKAPIVIDSDDSDDDDQEHDSTKFDDFILGMQRKLIVQDVMKELMSKSYVLPKPHVKKQKAHANAESSFTRFSIRYFSDVISKSSDYHKSIIHKYEFDFLLLFESNSVPVKFASWIVKHVDVRTSEIILNDKIIPVTVESVHAVLGVPLSGIEFSKDYEAGRQYVMYMFGQDAIPSVKFFGDLLIQKKDLSEDQIITSFLTVALACFLCPNSSLIPSVKYLTIFEDANLLKSYDWSKFVYEWLMTYAKKFQKNNTIGGCLFYWAALYLDNVDFGSRYIDQGLPRISVWKDDMISVFSDLDKIDDNTFGLRPLKDFRATCYFQPKPTHSRSNAIRAKLDSAIGSMIPDCLKEKISELLSSHFCSHHVLDSEPCEDILISILALLAESSQFHPLEVPTTHISPQINTEAGPSNREPTSPKARQSDFCVLNDDGVRSPAKHTSLSNVELYEKSVSRSTGKGCTSIDRIADLYGSIANCDDDSMLLNKLSAHPKAVVTPCGNANASSSHEDEPLLTPDVAYLRTRNNILNETNEGPSFAALSLVKNVANKFRSRITHFNSRTPFLGEEMPSFKLLDSDDDISDCDKENEVAEAITPACSQNSPEVQFLGESKFNDRCKKMCTKTDELYNASNNLSTSNQRFSSTGCKLPLYGPRRVLVPARHAIDPFVIDRPRFTVTDEENRYFIALCQLAESSKWQSY</aaseq>

Gene Sequence

<dnaseqindica>1..69#147..209#330..389#506..1132#1226..1399#1491..1812#1908..2018#2100..2170#2351..2399#2479..2550#2652..2848#4111..4403#4453..4459#ATGGCTCCTATGCATAAATCAAGGCTTGGCAAAGCTCCTATTGTTATTGACTCCGATGACTCTGATGATGTAAGTCAGTATTATGCGCTTTATCATTTTTGTTTCCATTTACTAAATTTATGTATTACATTTGTCTCTTTATTTAGGATGATCAAGAGCATGATAGTACAAAATTTGATGATTTCATTCTTGGAATGCAGAGGAAATTGGTATGTAATTATTCATACATACATATACACACACACACACAGATGCACACAGCCATATATTTATTGTAGTTCTTACTTTTTTTTTTCTGATTGATTCAATCTATATTTAATTTTCTATAGATTGTTCAAGATGTGATGAAGGAACTGATGTCCAAATCTTATGTTTTGCCAAAGCCTCATGTATGCTACTTCACCTTTTTCTTTCTTTTGGTATTATGTTTTTTTTTAGTTTTGCTCCCTATTATTCAAAAATTGCTTTGAATGTGATCGATTTTTTTTCTTCAATTTTTTTAAAGGTGAAGAAACAAAAGGCTCATGCTAATGCAGAATCGTCTTTCACAAGATTCTCTATCAGATATTTTTCAGATGTTATTTCCAAGTCATCTGACTATCACAAGTCCATCATCCACAAATATGAGTTTGATTTTTTGTTATTGTTTGAGAGCAACTCTGTTCCTGTCAAATTTGCATCTTGGATTGTTAAACATGTCGATGTCAGGACTTCTGAAATAATTCTAAATGACAAAATTATCCCAGTAACAGTTGAATCAGTGCACGCTGTTCTCGGTGTTCCTTTAAGTGGAATAGAATTCAGCAAAGATTATGAAGCTGGCAGGCAATATGTCATGTATATGTTTGGTCAGGATGCTATTCCTTCGGTTAAATTTTTTGGAGATCTACTAATTCAGAAGAAAGACTTGTCTGAAGATCAAATAATCACCTCTTTCCTTACTGTTGCCTTGGCTTGCTTTTTATGCCCCAACTCATCTTTGATCCCAAGTGTCAAGTATTTGACTATCTTCGAGGATGCTAACCTGTTGAAAAGCTATGATTGGTCAAAATTTGTGTATGAATGGCTGATGACATATGCTAAGAAGTTTCAGAAGAACAACACCATTGGAGGTTGCTTGTTTTACTGGGCTGTAAGTTTTCTTGTATAATTTTTGCTCTTTCATTAAATGTTTTTCTCTGTTCCAATTCATTCATTTCTTTTTCATATGTTTTCACTTATGTAGGCTCTGTATCTTGATAACGTTGATTTTGGCTCAAGATATATTGACCAAGGTTTGCCTCGCATTTCTGTTTGGAAGGATGACATGATTTCAGTATTCTCTGACTTAGACAAAATAGATGATAACACCTTTGGACTAAGGCCTCTCAAGGATTTCCGAGCAACATGCTATTTTCAGGTTCTTTTTTTTTTGAATTTTGATGTTTTTTCTAAGATATTATGCCTTGTGCAATATAGTTCCCTGATTGTTACTTTTTATCTTTTTGTAGCCCAAACCTACACATTCTAGGTCAAATGCAATTAGAGCTAAACTAGATTCAGCCATTGGCAGTATGATTCCAGATTGTCTCAAGGAGAAAATTTCTGAATTGTTGAGTAGCCATTTCTGCAGTCACCATGTACTTGACAGTGAGCCATGTGAAGATATATTGATTTCTATATTGGCTTTACTTGCTGAATCAAGTCAATTTCATCCACTAGAAGTTCCAACAACCCATATCTCTCCTCAAATAAACACTGAAGCTGGACCTAGTAACCGTGAACCTACAAGTCCAAAAGCAAGGCAATCTGATTTTTGTGTTTTAAATGATGGTAAGTTTAGTTTTTTATTCAGTTTTATTAATTATTTTTATTTTATTTTCTTTTGCAATTGAATTGTTGTGGAATGTTTTGTTAAATTTTTTTAGATGGTGTTCGATCTCCTGCTAAACACACCAGTTTAAGCAATGTTGAATTGTATGAGAAATCTGTTTCAAGATCTACTGGAAAGGGCTGTACATCTATTGATAGAATCGCAGGTATGTTTTTTTCTTTTCAATTTTTCTTTTTTCCTTTGGTATTTTAAATAATTTTTTGTGATGTAAAATGTTTGTTTATAGATTTATATGGTTCTATAGCCAACTGCGATGATGACAGCATGTTGCTGAATAAACTGTCAGCACACCCCAAGGTCAATTTATTATTGTTTTTCATGTTGCTTGACTTTATTTTCATGAATTAGACAAATGAAAACAATTGTGATGTTTCTCATCATTCCAATGAATCGAATGGTTTATTCTCTTCAATGAACCCGTGAGAATGTATGATTTTTTTAATCATCTTTGCTCTGTTTTCTATTTTGTATATACAGGCTGTCGTTACTCCTTGTGGTAATGCTAATGCTTCAAGCTCTCATGAAGGTAAATTTAGCAACATTTGATTAATTATTATTACTTGCTGAATTTATTTTTTAATTTTTTTTCTTTCCTTTTCTATCAGATGAACCTTTGTTGACTCCAGATGTTGCATATTTGAGAACTAGGAACAACATTTTGAATGAAACTAATGAAGGTATCATTTCTTTATTTCACTGTCATTTTTTTTAAATCCCTTGTCATGGTTTTCTGATGGATGTACTGAATATTGCTCTTTTCTCCCTTTATGTTCGCCAGGTCCTTCTTTTGCTGCTCTCAGCCTTGTCAAGAATGTTGCAAATAAGTTTAGGTCCAGAATAACACATTTCAATAGTAGAACTCCTTTTTTGGGCGAAGAAATGCCATCATTTAAGTTGTTAGATTCAGATGATGATATTAGTGATTGTGACAAAGAGAATGAAGTTGCTGAAGCTATAACACCTGCTTGTTCTCAGGTTTTTTTTTTTGCTAAGTTTTTGTTTTGAATATTTCATTAAACAATTTTTTTTATTGTACCATTGTAGGATTTTCTCTCTTTTCATTCTGTTGAGGACACTCCTGATGATATGATTCGTGGCAATTCAAATTTGCATACATCTCTAAGAAACAACTGTGGAAATATGAGCAAGAGGTTATTTCGAGATTTAACAGTAAGTTATACTTTTCTAATAATTTTGATTAGTATGTTCAATTTGTTATCTTACTGTATAAAGTTGTGTTAGCAGCTGTTTTAATGTAGTGTTGAGCTTTGTTTTTTAGTTTTCTTAATCTTTTTACTAATTTATTCAGTGTTATAGTAAATTTAGTCTCGGTAATTTAGTATTTCACTTCACCTCTATAGAGTTGTTGCTTACTGTCCTTTGTGGAAGTAAAGAAGCAAGATGGTATGGTTCTGTGCTGTCATTTTATAGATTTTTCTTGTTTTGTTTTCTTTTCCTGATCTAAATTTCATTTTTCCTTTTCCCCTGATGTGCGCTCTGAATTTCATTTCCTCTTTTTCATGATCTGTATTCTGAATTTTCATTTTCCTCTTGGCTGATATGCACTGAATTAAGCATTGTTTTTCTTGCATTGGTTGATGTTTTCCCATCTCTCTACTGAATTAAGCAAAAGATTGTTGTGCAGCAGCATCTCCCTTTTTTTTAGTTAGGGTAATAGCAACAGCAATAGCAGCAACAGTAATGCAAAGAACAGCATTAGCAATCTGACAGTGATCCAGATGCTTTTACTTTTGCTTGTGGTAGTATTTTGGATCTTGTTTGATGTGACTGTTCCTCTCTCTTTTTTCTTACTGTTCCTTGGCTCTAGCTTTAACTTTATTATCTTCTCTCTTCTTTTATTCTTCTCTTAACTTGGGCTGTTGGAACAGCATTTCTTCTCTTTGTCACTTTTGCTTTTTTCTGCTTTAATCATGCTGCATGTTACTCTAGCTTTTTTTAACTTAATTCTGAATCTATATTTGTCTTTCCTAATCTTTAGCTTCTTCCCATTTTTGTTGATATAAATGGTAGCTTCTGTATGTGAAAAATATTAGTTTGTCCGGGTCTATTTGCTAGCTGCCAGAGAGTGACAAATTATCTGTAAGATTGATTTCAAATGTATGGCTAGTTGTCTTCATGAATTCTACCCATATTCACATGAACGGCTAGATTTCTCATTGTAGACATATAATCAATTATCTTAGATATCCTTCTTTTTAACTACATTTTTTTATCAGAATTCTCCTGAAGTTCAGTTTCTTGGCGAGTCAAAATTTAATGATCGTTGTAAGAAAATGTGCACAAAGACAGATGAATTATACAATGCATCCAATAATTTGTCTACAAGCAATCAAAGGTTCAGTTCCACTGGTTGCAAGTTACCATTATATGGTCCACGGAGAGTATTGGTTCCTGCCAGACATGCAATAGATCCCTTTGTTATTGATAGACCTCGTTTTACAGTCACTGATGAAGAAAATCGATACTTCATTGCTCTTTGTCAACTTGCTGAGAGTTCCAAGTGGCAAAGGTATTTCATTTTTGCCTTGCTGAAACTTTTTGATTTTGTGGACTTTTAGCTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032842