BGIOSGA032846

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Revision as of 05:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032846| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032846, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA032846

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032846, complete gene.

LocusTag

OSJNBB0061I18.9

Ensembl Transcript ID

BGIOSGA032846-TA

Ensembl Protein ID

BGIOSGA032846-PA

Length

4809

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11317494..11322302

Sequence Coding Region

11317494..11317544,11317616..11317669,11318175..11318225,11318505..11318566,11318665..11318827
,11319335..11319445,11319546..11319683,11319765..11319839,11319937..11320057
,11321343..11321497,11321596..11321670,11321786..11321989,11322186..11322302

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11317494..11322302 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11317494..11322302 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCGCGCCGCCGCCCGCGCGCTCACCGTCAGCTCCCTCAACCCAAAGGTGCTCGCGCTGGCGGATCACCACCTCGGCGGACTCGTCGCCCGCCGCGCGCAGAGCATGCAACAAGAGCTAGACGCTAATCCAGCTTCACATCCTTTCAGTGAGGTTCTTGCATTGTGTAATCATCCCCATCTCCTAGACCGGAGTGAGGCCAGCTTCATGTTCAGCTCTGATGCGATAACGAGGGCACGGGAGATTGTAGGCTTCATTCCTGGAAAAACAACTGGAGGATACAGTCACTGTCAGGCAAATTCAATTGTTTCAGAATTCAGAGCAAATGCTGACAAATATGGGAATGAGCTTTCATCAAACTTGACTATTTTTGACAGGGTTCATATGATGATGCACTTGTTGATACGTGGCAAGAAGGACGGCATCCTTTGCCCAATTCCATCACACTCTTTGTACACAGATTCTATGGTTCTTCGTGGCGCAACTCTTGTACCGTATTACCTTGATGAATCCAGAGGTTGGAGTGTGAACATTTCAGATCTGAAGAAACAGTTGGATGGTGCCCGGGCAAAGGGCATTGCTGTGAGGGGACTTGTGGTGGTAAATCCTGGAAACCCTACTGGGCAGGTTCTTGTGGAGGAAAACCAGTGTGAAATAGTGGAGCTCTGCAAGAATGAATGCCTTGTTCTCCTAGCAGATGAGGTTTACCAAGAAAACATTTACACGGATCAGAAGAAATTTAACTCCTTCAAGAAGGTAGCACGGTCCATAGGCTATGGGGAAGGGGATATATCTTTAGTATCATTCCACTCAGTATCTAATGGATACTACGGCGAATGCGGGAGAAGAGGGGGTTACATGGAGGTCACTGGCTTCAGCTCGGAAGTAAGGGGAGAAGTATACAAAGTTGCATCCCTAAGCGCATGCTCCAACATATCTGGCCAGATCCTTATGAGCCTAGTCATGAACCCACCAAAGGTTGGAGATGAGTCATACCCCTCTTATCGTGCAGAAAGAGACAGCATACTATCATCTTTGTCTTGCTGTGCAGAGGCCATGGTGTCCACATTCAACAGCATGGAAGGGATGACTTGCAACAAGGCTGAAGGTGGAATATCTGTGTTCCCTAGTGTTCGGCTGCCGCCACGGGCAATTGAAGCTGCTGAGGCGATGAACACAGAGCCGGATGTGTTCTATGCTCTCCGTCTTCTCGAAAGCACTGGGATTGTTGTTGTGCCTGGCTCAGTGTTTGGACAAGTACCTGGAACATGGCATTTCAGATGCACAATTCTGCCACAGGAAGAGAAGACACGGCAGATTATCTCCCGCTTTAATGTGTTCCATGAAGCATTTATGGAAGAATTCCGCAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHCQANSIVSEFRANADKYGNELSSNLTIFDRVHMMMHLLIRGKKDGILCPIPSHSLYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIAVRGLVVVNPGNPTGQVLVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFHSVSNGYYGECGRRGGYMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDESYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEAMNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEAFMEEFRS</aaseq>

Gene Sequence

<dnaseqindica>1..51#123..176#682..732#1012..1073#1172..1334#1842..1952#2053..2190#2272..2346#2444..2564#3850..4004#4103..4177#4293..4496#4693..4809#ATGCTTCGCGCCGCCGCCCGCGCGCTCACCGTCAGCTCCCTCAACCCAAAGGTTTTGGATCTTTCTGTTTTTTTCTTCTCTGTCTCCGGCGGCTCGGGCTCACTGATCTTCTTCCGCTGCAGGTGCTCGCGCTGGCGGATCACCACCTCGGCGGACTCGTCGCCCGCCGCGCGCAGGTAATCAATCAATCAATCAATCAATCCCCCCCATTTGCTCACAATCACATGCATATGTGATATGCCTCAATGGGGGGACGAAAGAATCCTCTCTATTTGATTTGTGCGAAAAAATACGGTATGCCATCTTTGGGAAAAAAAAAGTTAGAACGCGTTGGTTTGTTTGATCGGCGGTGTTCTTTCTTGATTGGGACAATTGGAGTTAGGATCGGAGTAGGTTTAGTCTGCACATCGCAAACTGCATTGCTCATTTTTTTAGCTGGTGACAGTAACGGTTAATATCCTTATAGTAGAGAGGAAAAAAATTTTGCAAGCTGACACGGTATAGTGAAATTCAGACTATGTGATTGTTCTAAGAGTTTCTTTGGTGAATTGTTATTTTCAAAACAAGTTCCTTCGGTGGATTAATGATTGTTCTCAATTCTAGTATTTTGAGATTATGAAGGGGTTGCAGCTTAATGCCGTGATCAAACTCATCTTGTTTTTTCTGATTTCTTGGTTCTAGAGCATGCAACAAGAGCTAGACGCTAATCCAGCTTCACATCCTTTCAGTGAGGTGCGTTCATCTGAATCTTACTTTCAGTAGGAATGCCTGACTTTTCAGAGTTCCTCTGCATCTTACTTCTATTCAGTTCAGAGTTTCCCTGAGTTTACTATGGCTAATTTCCCCCATTTCTTGGAGTAGATCATCTATTGCAACCACAGCAACCCACAGTCCCAAGGGCAGCAACCAAACAAGTTCTTCCGGGAGGCGTGTGCATGTGCCCCTATGAATTTACTAGTCATTTATCATATTTTATTGATTTCTGATGATTCTTTTCTTTTCATGCTCCAGGTTCTTGCATTGTGTAATCATCCCCATCTCCTAGACCGGAGTGAGGCCAGCTTCATGTTCAGGTAAGAACTGAACAGAAATTGAGTATTCCTGTCACAATTGTACTTATGGAAGAGATGATCTGCAAGCTATACGTGATTGCCAAGTTCCAATGCTTCAGCTCTGATGCGATAACGAGGGCACGGGAGATTGTAGGCTTCATTCCTGGAAAAACAACTGGAGGATACAGTCACTGTCAGGCAAATTCAATTGTTTCAGAATTCAGAGCAAATGCTGACAAATATGGGAATGAGCTTTCATCAAACTTGACTATTTTTGACAGGGTATTGAAGGGTTGCGTGATGCAATTGCTGCTGGAATAGCTTCTCGCGATGGTTTACCGTCGTATTCGGAGGACATTTTCCTGACAGATGGAGCAGCTGCACCGGTACTATTTAGTTTGATCATTATACACATTGTTTTTTTTTTCTGGATAATGATGCGACTTTTTTTTTGTCACTGGTACTGTTGGGCCTCTGGATAGTATTACTCACATCAAACTGTTTTGATAAAAGTTGCGGTTTCGAAGATGCAACCAACAGTTCTCATAATCTGAAAACTGGCTTGATATTCTACGGATATAAGAACTTCAGTGAATGGATGATTTGGTTTAAAGAAAAAACATATGAGTAGAATAGCAAGCTAGGGTATTTTTTTTTGTCTGATAATGTTGTCTGTTTTGTACTTCAATCCTTGGCACTAATATGAACTATACATATTCTTAGTATCTGCCTCATATCTGATAAGGTTTTAAATAATGGAGATCATTGTGTTTCTTGATTTCCATATAGGTTCATATGATGATGCACTTGTTGATACGTGGCAAGAAGGACGGCATCCTTTGCCCAATTCCATCACACTCTTTGTACACAGATTCTATGGTTCTTCGTGGCGCAACTCTTGTGTGTACCACATTAACCAGACAGAAGCAAATCTCGATTGATACTAATTACTGTCTTGAACCAATCTGATCTAAGAAAGGAAAAATATCTGCATTTTCAGGTACCGTATTACCTTGATGAATCCAGAGGTTGGAGTGTGAACATTTCAGATCTGAAGAAACAGTTGGATGGTGCCCGGGCAAAGGGCATTGCTGTGAGGGGACTTGTGGTGGTAAATCCTGGAAACCCTACTGGGCAGGTTTGTTTACGGATCACTGAATCACGCTATTTCTTTGATTTTAAGGAGTCGAATGTGAATATGTGATTGAATTCCTCGTAGGTTCTTGTGGAGGAAAACCAGTGTGAAATAGTGGAGCTCTGCAAGAATGAATGCCTTGTTCTCCTAGCAGATGAGGTGCCCATTGTATCTTTCTTAATAAGAACATTTGTAGTATTTTCTTCCTTGGCTATTGCAAATATGACATTTACCGTTTCACGACTATCTTTGATAGGTTTACCAAGAAAACATTTACACGGATCAGAAGAAATTTAACTCCTTCAAGAAGGTAGCACGGTCCATAGGCTATGGGGAAGGGGATATATCTTTAGTATCATTCCACTCAGTATCTAATGGTACAAACCGTTTACTTTGTCTCATTCATGATCGTTCTCAAGTTCTAGTATATGCAAATCTTTGTTTATTGCAACTTGAAAAAATAAAGGCAACTCTATTGTTACTTGTGCTTTTGAGTTATGGTCCTTTTAACTATTAGTTTTGGAACTCATTGAGAGAAAAAAAATACACATAAGATTTTCAGGGAAGGCAAATTTCTTTGACTGCTACATGAATACTATCGATTGAATGGAGTGAATGCTCTTTTATAAGCTGAACTTATTACGTTTACATGAAGACGGCCTGACTCTATTTACTTATCTAGCATGCCATGCACTCTACCTATCAATATATTGGACATTTCTATTTCCCAAGCACTAAGACTCCTTGATTAAGAATGTTCACCACTATAGATGGCCATAAGGCCTGAGGCCTGATGGCCCGGCCCACGGCACGACCATTTTGCCTGGCCCAAGCATGGCATGGCACGACTGGTGTCGGGCCCGTGTCGGCCCGGCCCGACAGTTGGGCCGTGCCTAGGTCGATGCCTTAGCACGGTGGGCCGGCCCGACACAACACGATCAAAGAAAATAAGTTGAGGGATCCAAAATAGACTTAAATCAGCTATATAAGGCATGGCCCAAAGAGAAGAGGGATACAGAATAGACTTATGCCATTCATAAAAGCCACAGCCCAAAGAGATGAGGGAAGAAAAATGGACTTAATATATGGAGAAGCACGATGGGCTGTCCGCTGTCGTGCCTTCGGGCTGGCTCGGCACAGCCCGAGACTTATTGGGCCGTGCCTAGGCCGTGTGTGCAGCCCGTGGGCTGACCCAACCTGGCCTGGCATGTAGGTCGGGCCGTGCCGGCCCGACTGACCTCGGCCCATGCCCGTTCGTTCCTGGGTCGTGCCGGGCCGGGCAGCCCATATGGCCATCTATATTCACCACAATGTATTTTTTTTTCTTTTCATTCTCCAATAAAATCCTGTTTATAAAGAGGGCCTAACTCTATCTACTTATCTAGCATGCCATACACTCTGCCTATCAATATATTGGACATTTCTCGTTCCCAGGCACTAAGACGGTCCTTGATTAAGAATGTTCTCCACAGCGTGTTTTGTTTCTTTTTCCAATCAAATCCTGTATATCGATCTTTTCTGCCAAATTCTAAGTAGTCTGAACTGTTGGATGTGATGCAGCATGCATTACAAATTCTTTATTGATCAGTATACAACATTACAACTACATACTCTTTGTTGATGGATGTGATAAGTGATAACAAGTATTGTCCTTTTCATCAGGATACTACGGCGAATGCGGGAGAAGAGGGGGTTACATGGAGGTCACTGGCTTCAGCTCGGAAGTAAGGGGAGAAGTATACAAAGTTGCATCCCTAAGCGCATGCTCCAACATATCTGGCCAGATCCTTATGAGCCTAGTCATGAACCCACCAAAGGTCTCTGAATTCTTCACCTTCGGCATCGACTTTTTTTATTTTTCTTTAAGGGAAGACATCAACATTTTGCATACCTTAATAATCCTCCCTTTTGTCAGGTTGGAGATGAGTCATACCCCTCTTATCGTGCAGAAAGAGACAGCATACTATCATCTTTGTCTTGCTGTGCAGAGGTATCTTATTTCTTTCTTCAATACAATGATTTAAAGCTCTGACTTGTTACGATTTCACTGCGGTAAAGACCATGGTTGGCCAAAACTGAATGTTGCATTTGTGCACTGGTTTTAGGCCATGGTGTCCACATTCAACAGCATGGAAGGGATGACTTGCAACAAGGCTGAAGGTGGAATATCTGTGTTCCCTAGTGTTCGGCTGCCGCCACGGGCAATTGAAGCTGCTGAGGCGATGAACACAGAGCCGGATGTGTTCTATGCTCTCCGTCTTCTCGAAAGCACTGGGATTGTTGTTGTGCCTGGCTCAGTGTTTGGACAAGTGAGTACAATATTCTTACATCTATCTACTTGTATATTATTCAGAGTAGAATATAAACTTAAGACATGGTTTTTATACTTTTCAATGATTAGATGTTCAAGCATTAATACATGTTTGTTGATCTTGCAGAAAAATATTCCTTTTTCTTTCTGCTGGTATTCTAACAAATGCTCCTCTTGTTGGTTATATTCTGCAGGTACCTGGAACATGGCATTTCAGATGCACAATTCTGCCACAGGAAGAGAAGACACGGCAGATTATCTCCCGCTTTAATGTGTTCCATGAAGCATTTATGGAAGAATTCCGCAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032846