BGIOSGA032892

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Revision as of 05:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032892| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032892, complete gene.| tag = OsI_335...")
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Gene Name

BGIOSGA032892

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032892, complete gene.

LocusTag

OsI_33530

Ensembl Transcript ID

BGIOSGA032892-TA

Ensembl Protein ID

BGIOSGA032892-PA

Length

5120

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12391121..12396240

Sequence Coding Region

12391121..12391439,12392056..12392213,12393194..12393240,12394018..12394081,12394999..12395417
,12395798..12396028,12396210..12396240

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12391121..12396240 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12391121..12396240 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATATATGTCCATGGAGGAGGGTGAGGGGAGTAGTAGGGCGATGGTCGAGGAGGAGCCAGAGATCGCCTTCTTTGACGTGGAGACCTCCATGCCATGGGGTCCTAGGGAGAGGCGCACGCTACTCGAGTTCGGGTCCATCTTCCTCTGCCCGCGACAGCTGGTTGAGGTCGCGGAGCCCTTCATCACGCTCGTGCGCCCCTCCGACCTTGGGGTGGTCACGGAGGCGCTCGAACGTAAGGGCATCACGCGTGGTGCCCTCGAAGACGCCCCGCCCTTCTGTGACGTCGCTGATAACATCCACAACGTCCTGCACGGGCGAATCTGGGCTGGTCACAACATCATTTCGTTTGACTCAGAGATAATAAGGGAAGCATTCGCTGAAATTGGACGGTCGCCTCCGGAACCAAAGGGGATGATCGACACCTTACCTCTGCTTACCCAGACGTTTGGGAGGAGAGCAGGGAACATGAAGATGGCAAATTTGGCAGATTACTTTAATCTAGGGCCGCAAATTCACAGGAGTCTGTATGATGTCAGGATGAATCTTGATGTTCTCAAGTGTTGTTCTACAGTGCTGTTCCTGGAGGATAATTTTCCAGAACTGCTAAGCGGCGGTTTCCTCAACCCAAATGATATTTCACTCGAGTTCATCCAAGTTTCTATTTCTTTTTCCTCTTGTTTGGGCAAAAGAAGTCTAACTTCCGGCCTTCGCACCAATTCTCTTCCATACCAATTTGAATGGAGCTTATGTATCGAGCACAACGATAATCCGCTACAACTTCGTTGCATAGGTTTGAGGGTCCGTTATGAAGTTTGTCTGTATCAAGACAGTGAAGGTCGACCAAATAAGTTGAGCATAGTGGTTGACATCCCTGAGAATCTCAGACAAGTTCTAGAATTTTGTGATGAAATAGCTGAGATTACATTCCGGAAGTTTGGGAGCAATTCTGAATGGCGGCAAGTGATTAAGGAATACGGGAATCGTCCTAGTGTACGCCTAAACATCCCCATCGTAGGCAGCGGCGACGATGCGACCTATGCGACAGAGATATACCTGAAAGAGGCTAGCGGCAACATCCGGAAGAAGGATTTCAGCAAGGCAGATGTCGCAGAGCTGGAATTTATGTTTTTTCGAGGGGACATGGTCGACGCGTTCTTCTCTGTGGAACTATACGACTACAAAAATAATGCTGGTATTCGGCTGGTCGCCAAGAAGCTGGTTGTACACTGCAGATTAGAAGTGGCCAGCAACATGATCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MAYMSMEEGEGSSRAMVEEEPEIAFFDVETSMPWGPRERRTLLEFGSIFLCPRQLVEVAEPFITLVRPSDLGVVTEALERKGITRGALEDAPPFCDVADNIHNVLHGRIWAGHNIISFDSEIIREAFAEIGRSPPEPKGMIDTLPLLTQTFGRRAGNMKMANLADYFNLGPQIHRSLYDVRMNLDVLKCCSTVLFLEDNFPELLSGGFLNPNDISLEFIQVSISFSSCLGKRSLTSGLRTNSLPYQFEWSLCIEHNDNPLQLRCIGLRVRYEVCLYQDSEGRPNKLSIVVDIPENLRQVLEFCDEIAEITFRKFGSNSEWRQVIKEYGNRPSVRLNIPIVGSGDDATYATEIYLKEASGNIRKKDFSKADVAELEFMFFRGDMVDAFFSVELYDYKNNAGIRLVAKKLVVHCRLEVASNMII</aaseq>

Gene Sequence

<dnaseqindica>1..319#936..1093#2074..2120#2898..2961#3879..4297#4678..4908#5090..5120#ATGGCATATATGTCCATGGAGGAGGGTGAGGGGAGTAGTAGGGCGATGGTCGAGGAGGAGCCAGAGATCGCCTTCTTTGACGTGGAGACCTCCATGCCATGGGGTCCTAGGGAGAGGCGCACGCTACTCGAGTTCGGGTCCATCTTCCTCTGCCCGCGACAGCTGGTTGAGGTCGCGGAGCCCTTCATCACGCTCGTGCGCCCCTCCGACCTTGGGGTGGTCACGGAGGCGCTCGAACGTAAGGGCATCACGCGTGGTGCCCTCGAAGACGCCCCGCCCTTCTGTGACGTCGCTGATAACATCCACAACGTCCTGCACGGTGAGGGGAGGGGGTTCTTGTCGTTGTATTTCTTGACATGTCTCCTTCCTTGACTTTCAGGAATGAGGAATCCATTTTCTTTCCCTTTCCATTTTCTTTTCTCTCAAGGAAATATGTAGTTTACTACTGCAGCAATATACTAGCAAGCACGTTCCAAGCATGTACATTGTTGGGTGAGTTTGAATAAAAGCTTTTATTATCTAAAATTCGATACATGCACATGGTTCAATGCCAACTAAATAAAAAAAAATGTTTCTTTCCAACTCCAACTTACTATGCTGCATGACTCAACGGTTATCTCAATTCTAATACATCAACAGTCACTACTTTAACTCCGTTTTCAATTTCAATCAGAGCCACTTTTTACAATACAAGCACAATGTCATCCATGCCAACAAACCAGAGAAGAAGAATAAGATTTAATTAGCACTTGAGTGGCATGATAGTTACATGTCAAACCTAGCTTCAATTCATCAATGCTAGACGAATGTACAATATCCATTTTAGTGTTCTATAATGGTCATTTTTTTACCACTGTAAAGATTTATTTTTTTAATAAAACTACTTTATTTTAGCCCTTTTCGTAGTGCTCTCTAACGTTGTTAATTCTGGACAGGGCGAATCTGGGCTGGTCACAACATCATTTCGTTTGACTCAGAGATAATAAGGGAAGCATTCGCTGAAATTGGACGGTCGCCTCCGGAACCAAAGGGGATGATCGACACCTTACCTCTGCTTACCCAGACGTTTGGGAGGAGAGCAGGGAACATGAAGGTGACCTTGTTGTTTGCATAAAATCACTTACAATTTCAAACTAAGAATGCTTTAGGTTCAGTTTGACATTGCGGCATATGGATCCTGATCATAAACTCGTTTGCTGCAACAACTTTTAGACATTTTGGTGTTTGCTAAACTGATTTTCTTATAATCTTGTCAATATTATTATGGTATGAAAATACGAAACAATTGGAAGAGACGTGAAAGTTGGATAATATATATAATCATAATTCAATCTATAAACCAAACGACCAAAATTATATGTTCAAATTTTTAGAGCAATTTTAAAAATGAGCACAGCTCAACACCAACACAACAACCACAAACCGAGTCTTAGTTATAGATGTACCATAAAAGATAGGAAAAACTACAAAAACCATCCCATAAGTCACTTGAAGTTTGATAAGTTATTTTGTCACAAATATCCACTCCATGCTCTGTTTTGTTGTAAAAATCACCCTCGTGCGCACATGCTTAATTAAATCACCCTAGAGCTACCACATGATGCTAAGCAACCCGAGTCAATTTTATTCAAGTGCTTGCATTAGATTTATCCTTCATGTTTCATTGAACTTTCTTTATATAGCAAAACACAGTGTAACAACATCTAAGCTCTCATCAGCATTTCTATTTGTGGAATCTTCAAAAATTATTTTATCAAAACTATATTCTACGTGTATCTAAGTTTGGTAAAGATCACATTGACGGCTCATAATTTATTAAAACATGTTGATTCGGTTAGACATACGTTCACTGGGGTGGTTTTTCAATAAAATTGAGTAGCTGGGTAGGTATTTGTAATAAAATAACTTATATGGTGAAATATCAGACTTCAAGTAACTTATGAGGTGGTTTTTATAAATTTCCCTAAAGAAAACCAAGATTTGCATGCTAAAGAATCCAGACCTTCGTTGAATGTTCTCATGGATATACATGATCCTTCTTGTCATTTGAATGAATATGGCTGATTTCTGCAGATGGCAAATTTGGCAGATTACTTTAATCTAGGGCCGCAAATTCACAGGTATATTATATAGAGTGTAAAATCCAAAATTTATATTCATTGCATCTGAATTCCAAATGCGTCCTTTCTCAACTTTGGATTTTTCTTATCCTTTCCTATTTGAATTGAAAACACATATACCCAAGGCATCATGTGGTAACTTAGCTGACATTTATTAAGTGATTATTTCATTACTGGTTACCTAGCCCGCTGAGCAGTTTCTATTAATATTACCTTCAATCATAAATATTTGATATTTATGACAATATTTGGTCAAAATTTTAAAATTCTAACAAGAATCTTTCTAAAGAGGTGTGGTGGAAACAATCACTGTTTTTTGAATATATATATCGCCCATCAACATTTACTCCTGCTACCAAACATAATACGAATCAAAAGTAATGATTAACTTCCTCATGATCCCACTTCAGTACATATCATGTTCAAATTGTTTTGTTTAGTTTCATTGGCACATACGCACTTCTCCAAGTACTCAGTATTTATTGTCAATTAGAGAAGTAGATTAGGAATCGTTATTTCACCTTCTTTTATTCAGTTTTAAGTATATATATATCCTAAAATTAATAGAGTAAATGATCTTCCACTAATTTGCTTTGCAATTTAAGCCATGTTCTTTTCATCAGATTATTCATTGGATCATTGAAACAAATTATTTTCTACATTCTTCAAAAGATGTGCTTTCCTAATAAAGTTTCTCCTGCTACATTGTTTAGACCCTTGTTTTTAAGCTATTCGTTAAGTTTAATCTATGACAATAATCTGCTCAATAATTTGCAGGAGTCTGTATGATGTCAGGATGAATCTTGATGTTCTCAAGTGTTGTTCTACAGTGCTGTTCCTGGTGTGTTTGGATTACCTACCTCCTGTTTTTCTGTTCCTATTAACTTCATATGATCTGGAAAACAACATTGTTCAAGCAATGCTTCTTTGACTGAAAGTCTGAAACAACTACTTGTTTCTATCATTTTTTTTCCACGCATTGGGCATCTGATGCAGCAGAGTGAGAACTAGTGATTGCATAGCATGATATGTCAACAATCCAACTTCGAATTGTGGGGTAATTCATAGAAATCTATTATCGAAATTAAGAATATTTAAATTTCTGTAATTCGTAGTAGCAACTTTGAATTGCCTAGAAATGCTACTGTGTAGAGAGATGGAGGAGAGCCAATCAATCATCATTTGGTTATGATATATTGTTTGTAGAATTCATTAATGTGTCTCACTGTCTGATAGTAGGTGTGTAAACGGGACGTGTATTACCCGCTATCCTGACTGACCCGAGGCTTATGAGACTAGTACTGGAGAGTGAAATGAATACTTGCCATTATCCATCAGAATTTGAACCTAGGAGAAAAATAGGATAGGGTATGTGATGAGTTGTAGCCGTACTATTAAACATACACCAAAATCTATTATGACTCCACTTATGAACATGATAAAAGATATAAATAGTCCTTATTTATGAACTCGCAAATGAATCGCTAGATCCATCCCCATTTAACAGTTGAAAGGCCCAACTAATCAGGTTCTCTAATTGTCCCTAGGCTTAATATCTTAGTACTAGAGATAAAAATCCGTTCTTGGATCCAATTCCGAGGGAAAAAACCGGGATAAGTAAATCGATGCTTGGTTTTGACTCTGAAGAAAATACAAGATAGGTCAAAAAAGAGTGCTATCCGATCATATCTGACCTGATTATACCTGATCATATTTGATAGTACAATTTATTGGCTAAACCATGAAATTCTTTTGCAGGAGGATAATTTTCCAGAACTGCTAAGCGGCGGTTTCCTCAACCCAAATGATATTTCACTCGAGTTCATCCAAGTTTCTATTTCTTTTTCCTCTTGTTTGGGCAAAAGAAGTCTAACTTCCGGCCTTCGCACCAATTCTCTTCCATACCAATTTGAATGGAGCTTATGTATCGAGCACAACGATAATCCGCTACAACTTCGTTGCATAGGTTTGAGGGTCCGTTATGAAGTTTGTCTGTATCAAGACAGTGAAGGTCGACCAAATAAGTTGAGCATAGTGGTTGACATCCCTGAGAATCTCAGACAAGTTCTAGAATTTTGTGATGAAATAGCTGAGATTACATTCCGGAAGTTTGGGAGCAATTCTGAATGGCGGCAAGTGATTAAGGAATACGGGAATCGTCCTAGTGTACGCCTAAAGTGAGTTACATTGCTCTCTGATTCTTTTAAAATGTAAAAATAAGTGCCAAGTGTTCATGCTTCTGTGATTTTTAACAACAACAACGATACTTCCTCTGTTTCGTATTATATTTATAAGTCGTTTGAATATTTTCCTAGTTAAACTTCTCTAGGTTTGACTAAATTTATAGGAAAATATACTAATATTTTTAACACAAAACAAATATTTTATCAAACTATAGTCAATGTTAGATTTAATAAAACTAATTTCATATATTAGATATTGTTAAAATTTTACTATAAATTTAGTCAAACTTAACTAAGTTTGTCTTAAAAAAAAGATTAAACAAATTATAATATAAAACCGAGGGAGTAACAACAACCACATTCCCTTTTCGCAGCATCCCCATCGTAGGCAGCGGCGACGATGCGACCTATGCGACAGAGATATACCTGAAAGAGGCTAGCGGCAACATCCGGAAGAAGGATTTCAGCAAGGCAGATGTCGCAGAGCTGGAATTTATGTTTTTTCGAGGGGACATGGTCGACGCGTTCTTCTCTGTGGAACTATACGACTACAAAAATAATGCTGGTATTCGGCTGGTCGCCAAGAAGCTGGTTGTACACTGCAGGTAGCATGCATCACCAGGCTAAATAGCAGATATATAATCCCAAGTGTTGTAAACTAATTAATAGTTTTTTTTAAACAACCCGTATAAAAGAGTGCGAAGTTTCATATTTTTTAATTCGTAGTTGCACTTATAATTTGGTGGTGTTAATCAGGTGTAATGTAAACAATTTGAATATGTGTAGATTAGAAGTGGCCAGCAACATGATCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032892