Os11g0111900

From RiceWiki
Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0111900| Description = BTB domain containing protein| Version = NM_001072096.1 GI:115483804 GeneID:4349583| Length = 1847 bp| Definition =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0111900

Description

BTB domain containing protein

Version

NM_001072096.1 GI:115483804 GeneID:4349583

Length

1847 bp

Definition

Oryza sativa Japonica Group Os11g0111900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:557815..559661

Sequence Coding Region

557952..558413,558509..558685,559360..559548

Expression

GEO Profiles:Os11g0111900

Genome Context

<gbrowseImage1> name=NC_008404:557815..559661 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:557815..559661 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaatcaagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccaggaaggcttcgcggcggcgtggaaggacggcatccacaccgacatcgccatcaggcctggaactgggcctccaatccaagcccacaaggccatccttgcgaccaggtcggaggtgttccggcacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcgcggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcttgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctgaaggagcgcgccatggggacggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctctgcgtccagatcacccgcacacttctcgccaataaaagcttacccgccaagacgccttaa</cdnaseq>

Protein Sequence

<aaseq>MDCCVCSPMASMYRLPRNAICAACYEGAKAIIAFFNDDDDEHAD ADQGSVKPSRLTKLNSTIKGLRDAWEEVKQMRCREEETKQRASFLQEGFAAAWKDGIH TDIAIRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHL LAFLYTGSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAE LSSSAALKERAMGTVVEHAEEVVFSPEYEEFAVRNAALCVQITRTLLANKSLPAKTP</aaseq>

Gene Sequence

<dnaseqindica>1249..1710#977..1153#114..302#aatgctagcgttgctgttcacgtcgttgcctagccacaaggagaaggaagaaggaaaagaaggcagaaggcagcagcaggagcagcaggagaaggagaaggcgagaagaaacaatggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaatcaaggtaagaccttctcatatctcattttgctcctttattagtcctttaggattggtatgttcggtttacaaccatctcaaattctcaattgtgccgtgtgctctgcttccatgaaaaatctttccttgcgtgtttctagattctaggagcagagcaatttcggaagagaatgaattgataaaaaggaattccatgtcgcatgtaatgaatataaactcttgttgcattggttacatcattcagtttcattgacgcatgcgtcaggtttgctgtcaacgttgtgttggttaatggtgaggagcaagtctcaatcgagagctgcatgagaatgataggtttggtggaaatctcattgtcaaaaggttcatgattgatcgatgcttaaagcccgttttcagaagctgtattttatatactagtgtgcttcaacagctgatgttatcttttttttattaaaaaaccaaaccggcatgacatacataagattctccttgattgcaatagctggaatgaggaaataaaggtgcatgccttggacaagttgttatgctaatcttcagaaagaattaattctgaacaatcacagattaatgcttttttttttggtgggggtgcatgggacatactacactaatcagcatcatggtgctaacatttgtgcgtgttacgcaatgtagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccaggaaggcttcgcggcggcgtggaaggacggcatccacaccgacatcgccatcaggcctggaactgggcctccaatccaagcccacaaggccatccttgtcagtctctctctccctcaatttcagcctaataggccggccttcttttagtttgattcggcccaatgaaactaattaggcccagctatatacaggcgaccaggtcggaggtgttccggcacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcgcggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcttgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctgaaggagcgcgccatggggacggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctctgcgtccagatcacccgcacacttctcgccaataaaagcttacccgccaagacgccttaatattctttttttttccttcgttgatttagaatttagttagacgacgtgcgatgtatacgtgtaaatgatagtacatgcatctctggaagattaatgtgatcaatatatgcaatttatattagtttctttgcacgaat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0111900, RefSeq:Os11g0111900