BGIOSGA032911

From RiceWiki
Revision as of 05:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032911| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032911, complete gene.| tag = SIP8| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032911

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032911, complete gene.

LocusTag

SIP8

Ensembl Transcript ID

BGIOSGA032911-TA

Ensembl Protein ID

BGIOSGA032911-PA

Length

1901

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12775947..12777847

Sequence Coding Region

12775947..12776442,12776547..12777847

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12775947..12777847 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12775947..12777847 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCGAAAAACCATGCGAGATCCCAGGACTTCTGGAGGAGATTCTGGTCCATGCTGTCTTATGCTTGCAGCGAGCTTTGCTTGATCATCCTGCTCCATGTGGCCGCAGGAGCATCCTACCTGGCGACGAGGTTGGCGCGCATCCACAAGCTCAAGATGCCATGCATCCTGTGCACAAGGATGGATCATGCCCTTCATGGGAAGCCATGGTTCTCTTCGGATTTGGTCTGCGCCGCGCATAGGTCGGAGATATCATCTCTGGCATACTGCAGTAGCCACAACAATCTTGCACAATGTGATGATCTCTGCAAAAGATGCACTGTAGCAACGAATGATGTGGTTGACACAAGGAGATCGAAATCCAGGCAGCTGTGTTCTTGCTGTTCGGAGCCATTCACCAAGGCGCGCAATGCGCATAGGATTTCTGAGACTGCCAGTGTTTCTGGGGAGATCAACCGGGAACAAATCCCTGCAGATCATTCAAAAGATAAGGCCTTTGTGGTGGGTATTGAGGAGGTGAATGAATCTGATAGTTCACCACGAACATATGAACAATCCACAAAGAACAATGGCGCTTCTGGAAATGCTGGGACTGCAAAGCTAGCACCCAGTGGATCTACTGTGCCTATGCGCGTTTTCGTCGATCGCAACAGCAGCGTAAAGAACGGTTTCATAAGTAGGGCCAATCTTTCATCACCTCGGCCATCACAAATAATCTCTGCCAAGGACAGCAATTCAACCACTCAGCAAGAAGTGAAGGCATTCCTTTCACAGATGTCTACTGTAAGGGGCATTGACAGTTCTTGGAGTGATGGAGCTCCTAGCCCCGGAATCAATGCGCAAACCGATGAAAGCAATGCCAATGGCAGGAGGCCATCCCTCGAGAGGAACTATTCTGTGATAGAACCATCGGATGCGAACCTCGCTGATGAAGTTGAGGGAGAGAGCTCTCCTGAGAACCTGAAGCGGCTTCTTGAGCTCAACAAGAAGTCGATGAGTGCTCTCTACAAAGAGCTTGAGGAAGAACGTAGCGCTTCGGCGATCGCGGCTAGCCAAGCAATGGCCATGATCAATAAGTTGCATGAGGAAAAGGCTGCAATGCAGATGGAGGCACTGCAATACCTGAGGATGATGGAAGAGCAGGCCGATCATGACCACGAAGCGATTCAGAATCTTCACGACTTGCTTACGGAGAGGGAGAAAGAATTACTTGACATGGATGCTGAGCTTGAGAACTTCAGGAGGCTAGTCCAGAATGAACAATTCAATGGCGGGAAACATGATATCGCTGGCATAATGAATGAAACAGACATGCCGTTTGAGGTCTTGAATGACTTGGGCTACACGAAGAACACCATGTCGGGTTTCGAAGATGAAATGGCGTATATTTTGGAATCGATAAGCAGATTGGAGGATAAGCTCTGCGTCTCCACAAACAGACTTGCTTCTGACGATGCCAAAATTAATCAAGAGGGATTGATAGGAGGGGCTGATTTTGGGAGCTCACCAACGCATGGTGAATCAACTTCTGATCAGCAAGATGATGGAAACAAATCTGTTCAGAACCATAAGGATAACTGTTCTTGTTCTCATCCAGAGGATGGGAAAACGAGTGATGCAAATCTTAAGGATGAAGTCTCACTGTTGCATACGAGATTGCAGGCACTTGAAGCTGATCAGGAGTTTCTTAAGCATGTGTTAAACTCCCTAAGGTGTAGCCCTGATGGACTGCAGTGTGTACAGGAGATAGCCAGCCATTTACTAGAGTTGAGAAGAATTGCAACTCAGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MAAKNHARSQDFWRRFWSMLSYACSELCLIILLHVAAGASYLATRLARIHKLKMPCILCTRMDHALHGKPWFSSDLVCAAHRSEISSLAYCSSHNNLAQCDDLCKRCTVATNDVVDTRRSKSRQLCSCCSEPFTKARNAHRISETASVSGEINREQIPADHSKDKAFVVGIEEVNESDSSPRTYEQSTKNNGASGNAGTAKLAPSGSTVPMRVFVDRNSSVKNGFISRANLSSPRPSQIISAKDSNSTTQQEVKAFLSQMSTVRGIDSSWSDGAPSPGINAQTDESNANGRRPSLERNYSVIEPSDANLADEVEGESSPENLKRLLELNKKSMSALYKELEEERSASAIAASQAMAMINKLHEEKAAMQMEALQYLRMMEEQADHDHEAIQNLHDLLTEREKELLDMDAELENFRRLVQNEQFNGGKHDIAGIMNETDMPFEVLNDLGYTKNTMSGFEDEMAYILESISRLEDKLCVSTNRLASDDAKINQEGLIGGADFGSSPTHGESTSDQQDDGNKSVQNHKDNCSCSHPEDGKTSDANLKDEVSLLHTRLQALEADQEFLKHVLNSLRCSPDGLQCVQEIASHLLELRRIATQR</aaseq>

Gene Sequence

<dnaseqindica>1..496#601..1901#ATGGCTGCGAAAAACCATGCGAGATCCCAGGACTTCTGGAGGAGATTCTGGTCCATGCTGTCTTATGCTTGCAGCGAGCTTTGCTTGATCATCCTGCTCCATGTGGCCGCAGGAGCATCCTACCTGGCGACGAGGTTGGCGCGCATCCACAAGCTCAAGATGCCATGCATCCTGTGCACAAGGATGGATCATGCCCTTCATGGGAAGCCATGGTTCTCTTCGGATTTGGTCTGCGCCGCGCATAGGTCGGAGATATCATCTCTGGCATACTGCAGTAGCCACAACAATCTTGCACAATGTGATGATCTCTGCAAAAGATGCACTGTAGCAACGAATGATGTGGTTGACACAAGGAGATCGAAATCCAGGCAGCTGTGTTCTTGCTGTTCGGAGCCATTCACCAAGGCGCGCAATGCGCATAGGATTTCTGAGACTGCCAGTGTTTCTGGGGAGATCAACCGGGAACAAATCCCTGCAGATCATTCAAAAGATAAGGGTAAGTTCACTTGTCTGAACTACTGTACTTCAGATTCTCTTATAACTGAATCCTTTTTAGAGGTTCACCGAGTGAATCCATTGTTTTTTTTTTTTTTTTTGTAGCCTTTGTGGTGGGTATTGAGGAGGTGAATGAATCTGATAGTTCACCACGAACATATGAACAATCCACAAAGAACAATGGCGCTTCTGGAAATGCTGGGACTGCAAAGCTAGCACCCAGTGGATCTACTGTGCCTATGCGCGTTTTCGTCGATCGCAACAGCAGCGTAAAGAACGGTTTCATAAGTAGGGCCAATCTTTCATCACCTCGGCCATCACAAATAATCTCTGCCAAGGACAGCAATTCAACCACTCAGCAAGAAGTGAAGGCATTCCTTTCACAGATGTCTACTGTAAGGGGCATTGACAGTTCTTGGAGTGATGGAGCTCCTAGCCCCGGAATCAATGCGCAAACCGATGAAAGCAATGCCAATGGCAGGAGGCCATCCCTCGAGAGGAACTATTCTGTGATAGAACCATCGGATGCGAACCTCGCTGATGAAGTTGAGGGAGAGAGCTCTCCTGAGAACCTGAAGCGGCTTCTTGAGCTCAACAAGAAGTCGATGAGTGCTCTCTACAAAGAGCTTGAGGAAGAACGTAGCGCTTCGGCGATCGCGGCTAGCCAAGCAATGGCCATGATCAATAAGTTGCATGAGGAAAAGGCTGCAATGCAGATGGAGGCACTGCAATACCTGAGGATGATGGAAGAGCAGGCCGATCATGACCACGAAGCGATTCAGAATCTTCACGACTTGCTTACGGAGAGGGAGAAAGAATTACTTGACATGGATGCTGAGCTTGAGAACTTCAGGAGGCTAGTCCAGAATGAACAATTCAATGGCGGGAAACATGATATCGCTGGCATAATGAATGAAACAGACATGCCGTTTGAGGTCTTGAATGACTTGGGCTACACGAAGAACACCATGTCGGGTTTCGAAGATGAAATGGCGTATATTTTGGAATCGATAAGCAGATTGGAGGATAAGCTCTGCGTCTCCACAAACAGACTTGCTTCTGACGATGCCAAAATTAATCAAGAGGGATTGATAGGAGGGGCTGATTTTGGGAGCTCACCAACGCATGGTGAATCAACTTCTGATCAGCAAGATGATGGAAACAAATCTGTTCAGAACCATAAGGATAACTGTTCTTGTTCTCATCCAGAGGATGGGAAAACGAGTGATGCAAATCTTAAGGATGAAGTCTCACTGTTGCATACGAGATTGCAGGCACTTGAAGCTGATCAGGAGTTTCTTAAGCATGTGTTAAACTCCCTAAGGTGTAGCCCTGATGGACTGCAGTGTGTACAGGAGATAGCCAGCCATTTACTAGAGTTGAGAAGAATTGCAACTCAGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032911