BGIOSGA032915

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Revision as of 05:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032915| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032915, complete gene.| tag = OsI_335...")
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Gene Name

BGIOSGA032915

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032915, complete gene.

LocusTag

OsI_33574

Ensembl Transcript ID

BGIOSGA032915-TA

Ensembl Protein ID

BGIOSGA032915-PA

Length

4149

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12829885..12834033

Sequence Coding Region

12829885..12829990,12830083..12830392,12830483..12830704,12830797..12831036,12831198..12831275
,12831312..12831507,12831555..12831736,12831822..12831904,12831997..12832121
,12832233..12832311,12832395..12832563,12832642..12832702,12832783..12832905
,12833023..12833220,12833398..12833466,12833715..12833791,12833946..12834033

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12829885..12834033 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12829885..12834033 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCACTGGCATCTGAAGAATACGCTTCACAGTCGAAACTACTTCAAGAGTTCACCAATGCTCCCAGCATTGACGGTGCTTGGGTTTTCCAGACCAACAATGAAGACAGATCCACAGCAATGTATTCGATTAGCCAAACAAACCTACTGGCAAACAACAAGAGAAAATATATTTTGTTTTCTCATATTATGAGAAATGGTACTAACCTTCTGGACTTTCAATGGTCTCCTTTCCCTATTCAAATGGATGGAGTGTCGGCTGTTGTACCATCTCCATCGGGATCAAAGCTTCTTGTGGTGCGGAATGGAGAGAAAGGTTCCCCTACAAAGCTTGAAATTGTTGATCAATCACATGTGGAGAAAGAGATACATGTAGCTCAGTCTGTCCATGGTCCACTTTATACTGATGAGTGGTTTCATGGGATTTCCTGGAACCAAGAAGAGACCTTAATAGCATATATTGCTGAAGATTCACCTGAACCAAAACCAGTTTTTGATGATACTGGATATAGAAAAGAAGGTTCTTCTGAGAAAGACTGCAATAACTGGAAAGGGCAAGGGGATTGGGAAGAGGATTGGGGTGAAACTTACTCCAAAAAAGGGAGACCTTCATTGTTTGTCCTTGACATTAATAGTGGAGAAGTACGAGCTGCAAAAGGCATTTCAAGATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCACCATCTTCATGTGGAAGGCAGAAGTATCTGATTTTTGTTGGATGGTTAGAGCACAATGGGTTTCAGAATACTCCTAGAAAACTAGGCATCAAGTACTGTTCTAATAGGCCATGTTCTCTATACTCAACTCTTCGCCCTTTCGAAGAATCAGATGTTGATAATGCACCAGCTAGTGATTCTAAATTAGAGCCTGCTTCAGTAGCAATCAACTTAACTCCAAGCATAAGCAGTGCTTTCTTTCCGCGGTTCAGGACCTTAAACCATGCTAGAAAAATTCTTCACGGAAAATCTCTAATTATTTTCAACAGCAAGGATGGAAAACTTCTGGTGTTTCTATCTGCAAATCGTGCTGTAGACAGTGGAGCGCACAATGCAACAGATTCACTGCATAAGATCAACTGGCCTTCTGACTGGAAAATGGATCAATACCTCGAAATCACTGATGTGTCAATTTATTTAACTTCTGAACTGTGCCAGATTCCAATTGTAATGTGTCCTCAAGATGGTTGTTTTCCTGGTTTGTATTGTTCTTCCATGCTATCGAATCCTTGGCTTTCTGATCGATGTACAATGATTCTGACATCTGCTTGGAGAAGCACTGAAGTGATATTATCAATCGATGTGTTGAGTGGAAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGATGGCCACAATGTTCTTGCTGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGGCCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAATCCATTGATGGCAGCTAACAATAAGGTAAAGGCTTTGTTGTCACATCACCAATTCAGCATACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGCAGTAAGCTTCCATTTGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCATGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATCACTTGGATTTAACCTACTTATTGTAAATTATCGAGGGACACCGGGTTTTGGAGAGGAGGCTTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGATGTCCAAGACTGCCTTACAGCTCTAGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTCACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNLLANNKRKYILFSHIMRNGTNLLDFQWSPFPIQMDGVSAVVPSPSGSKLLVVRNGEKGSPTKLEIVDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTGYRKEGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQVVWAPPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLRPFEESDVDNAPASDSKLEPASVAINLTPSISSAFFPRFRTLNHARKILHGKSLIIFNSKDGKLLVFLSANRAVDSGAHNATDSLHKINWPSDWKMDQYLEITDVSIYLTSELCQIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVILSIDVLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWVWDEVNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHKPTILVLHGGPHSVSVSSYSKTSAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDVQDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMIGTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADLRVPISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLSISASDASA</aaseq>

Gene Sequence

<dnaseqindica>1..106#199..508#599..820#913..1152#1314..1391#1428..1623#1671..1852#1938..2020#2113..2237#2349..2427#2511..2679#2758..2818#2899..3021#3139..3336#3514..3582#3831..3907#4062..4149#ATGGATGCACTGGCATCTGAAGAATACGCTTCACAGTCGAAACTACTTCAAGAGTTCACCAATGCTCCCAGCATTGACGGTGCTTGGGTTTTCCAGACCAACAATGGTAGGGATGATTTTCGATTATACCTCATTAGTAATCATCATTTTACTATTTTCCAGAAGTGGCGTAAAGCAACTCTTGTGTCATGTTTGCAGAAGACAGATCCACAGCAATGTATTCGATTAGCCAAACAAACCTACTGGCAAACAACAAGAGAAAATATATTTTGTTTTCTCATATTATGAGAAATGGTACTAACCTTCTGGACTTTCAATGGTCTCCTTTCCCTATTCAAATGGATGGAGTGTCGGCTGTTGTACCATCTCCATCGGGATCAAAGCTTCTTGTGGTGCGGAATGGAGAGAAAGGTTCCCCTACAAAGCTTGAAATTGTTGATCAATCACATGTGGAGAAAGAGATACATGTAGCTCAGTCTGTCCATGGTCCACTTTATACTGATGAGTGGTAAAAGTACAGCATAATACCTGCACTTTTCAGTCCATTCAACCTATCTGTACAATATTCTGGATCATGATACTATTTTTGTTGGCACAGGTTTCATGGGATTTCCTGGAACCAAGAAGAGACCTTAATAGCATATATTGCTGAAGATTCACCTGAACCAAAACCAGTTTTTGATGATACTGGATATAGAAAAGAAGGTTCTTCTGAGAAAGACTGCAATAACTGGAAAGGGCAAGGGGATTGGGAAGAGGATTGGGGTGAAACTTACTCCAAAAAAGGGAGACCTTCATTGTTTGTCCTTGACATTAATAGGTCTCTCAGCACCTTCTAATTAATACATAATGTTGACCTGACCATAGATCTGACAATACGACTTACTGAAACCGTTTATTTGGTGTATTCAGTGGAGAAGTACGAGCTGCAAAAGGCATTTCAAGATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCACCATCTTCATGTGGAAGGCAGAAGTATCTGATTTTTGTTGGATGGTTAGAGCACAATGGGTTTCAGAATACTCCTAGAAAACTAGGCATCAAGTACTGTTCTAATAGGCCATGTTCTCTATACTCAACTCTTCGCCCTTTCGAAGAATCAGATGTTGATAATGCACCAGCTAGGTAAGTAACTGAGCACCCATCTTCAGATCATGCTGTAACTTTGTAAAGTTTACAAATTTACTTTATTTATCACTAGTTTGTTGAAATAAGAAAATGTAAAGCTCTGAATAACTATGCTTATGGGGCAGTTGTAAGTTGATATTTCCATGACATTTTTCCAGTGATTCTAAATTAGAGCCTGCTTCAGTAGCAATCAACTTAACTCCAAGCATAAGCAGTGCTTTCTTTCCGCGGTTCAGGTATGCCCGCATTAGTATTTGCGTATTTTCTTGAAGGACCTTAAACCATGCTAGAAAAATTCTTCACGGAAAATCTCTAATTATTTTCAACAGCAAGGATGGAAAACTTCTGGTGTTTCTATCTGCAAATCGTGCTGTAGACAGTGGAGCGCACAATGCAACAGATTCACTGCATAAGATCAACTGGCCTTCTGACTGGAAAATGGATCAATACCTCGAAATCACTGATGTGGTATGTCCTCAGATTTGTCTTGACCGGTACTTATCTGCTGTCTGCAGTCAATTTATTTAACTTCTGAACTGTGCCAGATTCCAATTGTAATGTGTCCTCAAGATGGTTGTTTTCCTGGTTTGTATTGTTCTTCCATGCTATCGAATCCTTGGCTTTCTGATCGATGTACAATGATTCTGACATCTGCTTGGAGAAGCACTGAAGTGATATTATCAATCGATGTGTTGAGGTAAACAAGGTTGCTCACATATGCCTTTCTACTGCTTCAAAAATCATTGCAATATCCCATGCTATTTCCTTAATTCCTCCTGCAGTGGAAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGATGGCCACAATGTTCTTGCTGGTAATTCTAGGTGCACATAATCAGTTAACTTATGCATCAAATTTTATTATTTTGGGTGTAATAATTTTATTTTATTTTTGTTTGTTTTCTAGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGGCCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAATCCATTGATGGCAGCTAACAATAAGGTTAGATGGTGTACAATTTGAAGTATACTTAGGTGTTCTTTGATGCTTTGAACAATGTAATTTACTAAATCAGGCTTTTTTTTTTCATTCTCACATTACCATCTGCTGCAGGTAAAGGCTTTGTTGTCACATCACCAATTCAGCATACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGTATAGTCATGGACACAAATATTTTAGACTATCATATGTGGCTTATCATCATTCACCAAGCAAATGTTTTTTATATCCTGCAGGCAGTAAGCTTCCATTTGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCATGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATCACTTGGATTTAACCTACTTATTGTAAATTATCGGTAAGTTTGCTGAAACATTTCTACAGTTCTGATCAATTAAGCTTATGGCATCATCTCACTATCATCTGAAAAAAAAAGAGGGACACCGGGTTTTGGAGAGGAGGCTTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGTATGTAATCCAGCTAAACTCTGAGTCTTTGTTTCTCATGAACCAACCTAATTTCTGATGTGTGTCAAACTGTCAAGCAGGATGTCCAAGACTGCCTTACAGCTCTAGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGTTAGCATCCTAACAGATTTTAGCCTCTCAAAGGAAAAGAAGAAGAAGAACAAAATCCTAATAGAAGTTAGTATATGTTTCTTGTTCAGCTTGTAATTTGTTGTTATTTTGTTTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTCACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGCATTTCTGTTCTCGCCTTCATTCAAAGAGCAAAAAAGAAATGTTCTTACTGATCAAGTCATTGTTCTTAAAAACAAATGAACCAGAGAAATCAAGTGATTAGCTACTCAAAAAGGCTCACTGAACTTTGCTGATTTTTTTTTTCTAAAAAAAAAAACTTTGCTGATTTCAACAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGGTACATCAATAGCCGTTTAAATTTGCCTCAGTAGTTTCCACTTTCAATTCGTTGTAGAAATAGTCCATAACAAAAAGGCTAGATCCTGAAACAACCTAACAATCCCGTGAAAAGAAAATCAATCGACGGGCTACATCAAACAGACATTCTTTAAATTCATCTACACTCGATTAATAACCTAACAATCCTGCATTTGCTTCACTCATTTGTCGGATTTGGTTAAACTATTCCTGCTCGGATGATTTCAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATGTAAGCAAGTAACTGAACCGAATTTCAGCTCATCTGCTTTATATAAAATGTCGGCAACAGCCGTTCGGAAAAAAAAAAGACATTCAGATGCCATTGTACTATTGCTTTTGTGCCTAATTTTCTCCCTCATACTGGAATCCATGCTTTTGTTCAGACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032915