Os11g0112200

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0112200| Description = Similar to Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1)| Version = NM_001072098.1 GI:115483808 GeneID:434958...")
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Gene Name

Os11g0112200

Description

Similar to Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1)

Version

NM_001072098.1 GI:115483808 GeneID:4349585

Length

1714 bp

Definition

Oryza sativa Japonica Group Os11g0112200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:570322..572035

Sequence Coding Region

570346..570555,570641..570832,571096..571261,571488..571873

Expression

GEO Profiles:Os11g0112200

Genome Context

<gbrowseImage1> name=NC_008404:570322..572035 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:570322..572035 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcccctaaatccttcgcctgcagtgtcattgccttgttgtttgctgcacacttggtttcagctcagcttagcgcaaatttctatgataagtcatgccctaatgcactgtccaccatccgaacagcggtgagatctgccgtagcaaaggagaaccgcatgggtgcatcattgctccgcctccacttccatgactgctttgtcaatggttgtgatggatcggtgctgctagatgacaccccaaccttcactggagagaagaccgccgccccgaacaacaactctctgcgtggattcgatgttatagacaacatcaaggcacaggttgaggggatctgtccgcaggtggtgtcatgtgctgacatccttgctgtggcagcacgcgactctgtttttgcgctaggaggtcctacttgggttgtccagctgggacggcgcgactcaacaacagcaagcctggatactgcaaacaatgacattccagcaccaacccttgacctgggtgatctcaccaagtctttttcaaacaaaggactaagcgcaactgacatgattgcactctcaggggctcacaccataggccaggcaaggtgcgtcaattttcgcaaccgcatctacagtgagaccaacatcgacacttccctggcaacatctctgaaatcaaattgtccaaacacgaccggcgacaacaacatatccccccttgatgcatcgacaccctacacctttgacaatttttactacaagaacctgctgaacaagaagggtgtcctgcattctgaccagcaactattcaatggtggttcagcagattcccagacgaccacctactcatcaaacatggcaacatttttcactgatttcagcgcagcaatagtgaagatgggcaacatcgacccccttactggatccagtggacagatcaggaagaactgcaggaaggtaaactag</cdnaseq>

Protein Sequence

<aaseq>MASPKSFACSVIALLFAAHLVSAQLSANFYDKSCPNALSTIRTA VRSAVAKENRMGASLLRLHFHDCFVNGCDGSVLLDDTPTFTGEKTAAPNNNSLRGFDV IDNIKAQVEGICPQVVSCADILAVAARDSVFALGGPTWVVQLGRRDSTTASLDTANND IPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQARCVNFRNRIYSETNIDTSLAT SLKSNCPNTTGDNNISPLDASTPYTFDNFYYKNLLNKKGVLHSDQQLFNGGSADSQTT TYSSNMATFFTDFSAAIVKMGNIDPLTGSSGQIRKNCRKVN</aaseq>

Gene Sequence

<dnaseqindica>25..234#320..511#775..940#1167..1552#acattgcactcaagcctgaactaaatggcttcccctaaatccttcgcctgcagtgtcattgccttgttgtttgctgcacacttggtttcagctcagcttagcgcaaatttctatgataagtcatgccctaatgcactgtccaccatccgaacagcggtgagatctgccgtagcaaaggagaaccgcatgggtgcatcattgctccgcctccacttccatgactgctttgtcaatgaaagtgtccagaacctgtacagatactcaagtttttctcacttctaagtatcaagtactaaccttcagtattctgacaatgcagggttgtgatggatcggtgctgctagatgacaccccaaccttcactggagagaagaccgccgccccgaacaacaactctctgcgtggattcgatgttatagacaacatcaaggcacaggttgaggggatctgtccgcaggtggtgtcatgtgctgacatccttgctgtggcagcacgcgactctgtttttgcggtaaggggagaaaatacaaaggatatcaaactaagagttagttatttgtctgtcttaaaaagttaacaggaactcctgacatcagtagatgagcaactgaaatgaacaaaacataactctttatgtatagctatgaaattctataccaaaacaagccttacaaagtattaaaagtcaagttgtcaaagatagtaaataaattgattgatatttataaaatataatcagtagtgacatataaaaactgacaatttatttttcagctaggaggtcctacttgggttgtccagctgggacggcgcgactcaacaacagcaagcctggatactgcaaacaatgacattccagcaccaacccttgacctgggtgatctcaccaagtctttttcaaacaaaggactaagcgcaactgacatgattgcactctcaggtactgtgtatgtaaattgaactttttggtatataataccatctataataaaaccataaaataaaacagctatccttgctgaagcttgattgtcaaaacaaactgtacaagtggtgttacatttacgtagagtatcaatatatcatggtgcaaccccaacaagttgtttagtatcaagatgctactcatcaattgatcactaacatcaaataaaaatatgtgccaggggctcacaccataggccaggcaaggtgcgtcaattttcgcaaccgcatctacagtgagaccaacatcgacacttccctggcaacatctctgaaatcaaattgtccaaacacgaccggcgacaacaacatatccccccttgatgcatcgacaccctacacctttgacaatttttactacaagaacctgctgaacaagaagggtgtcctgcattctgaccagcaactattcaatggtggttcagcagattcccagacgaccacctactcatcaaacatggcaacatttttcactgatttcagcgcagcaatagtgaagatgggcaacatcgacccccttactggatccagtggacagatcaggaagaactgcaggaaggtaaactaggtcataatttttacagtctaagcctgtgtgtgcctgtgtggaagagtataatcttcagagaagggagaagtgtccctttcctgatgctgtagtcgtcttgaaaggtgtctgtattgctattgaagaacacatatgtgaaagaataaaatggcataaaaaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0112200, RefSeq:Os11g0112200