Os09g0309200

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0309200| Description = Calmodulin binding protein-like family protein| Version = NM_001069366.1 GI:115478471 GeneID:4346682| Length = 4295 ...")
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Gene Name

Os09g0309200

Description

Calmodulin binding protein-like family protein

Version

NM_001069366.1 GI:115478471 GeneID:4346682

Length

4295 bp

Definition

Oryza sativa Japonica Group Os09g0309200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8738923..8743217

Sequence Coding Region

8738991..8739115,8739397..8739472,8739782..8739834,8741343..8741851,8742027..8742187
,8742316..8742393,8742547..8742628,8742726..8742952

Expression

GEO Profiles:Os09g0309200

Genome Context

<gbrowseImage1> name=NC_008402:8738923..8743217 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:8738923..8743217 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtggtgatcaaggattcatggcgtttaggcggattcgaggcgacgaacaagaggaggatagggatgatggtgggtggcctgaggccaagaggaagagacagacggtgccatctttcatatcagttatgagaggagcaatggctgccgaaaagattcagaaactcggcctggatctggaaccattttttcggaaggcggttcaggaggaactggaaagaagcctttctaaacatggacacctactgtacagatctcctccaatgcttgtcaactccgtcgattcttcgctgaagctcgccttcgcgaagcggctccagctcccaatcttcaccaacaacaagctcgtcgacgtcgacaacaaccctctccaagtccacctccttcacatgagctccaccaccacctctcatcatcatctccccatgatcaagaagctggaggtgctagtcctggatggagatttcagtcatggtgatgagggatggagcagcgacgagttcagcggcgccatcgtgagggagagggaaggcaggaggccactgctcgtcggcacgctcaatgtggccatggccgatgatcatcttggcgttgcattcattgatgacgtggcgttcaccgacaactcgagctggaccaggagcaggaggttcaggatcggcgtgcgcgccgtggcggtggcgggtagcggcgatggcggcgagctgaggatccgggaggcggtgagcgagagcttcatggtgaaagatcaccggggagaatcgtacaagaagcatttccctccgaggccagatgatgaggtgtggaggctgaagaacatacggaaagatgggccaatccacaagaggctggaatctgaacgtgtcaggaatgtgcagggttttctgaacctgcatgccaccaaccctgaaaagctcaggaagctcgttgtcatgtccgatcggctctggaaggcaacactgcaccacgcgaaaacatgcgattttagagctgcagaaatgatgcaagtgaagcaatcttcaatcgaggcataccagaattgggatcagctggacgaagctgagactaacaagacagcctcaggcaatcttggtcaggcacatgaaggatcactacaggcagatgagataggcaccgtatcagggcctcatttccagagcagaaaccagatggattctgaagattcattgtctgctgctgctgtaactgaagatgcagatgatgcactgtggagcccttgcatgacaagtgatggccatggcttgatcatgtggaaaaacaacacttcagtgtgggaccaaacgaactaa</cdnaseq>

Protein Sequence

<aaseq>MSGDQGFMAFRRIRGDEQEEDRDDGGWPEAKRKRQTVPSFISVM RGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHGHLLYRSPPMLVNSVDSSLKLAF AKRLQLPIFTNNKLVDVDNNPLQVHLLHMSSTTTSHHHLPMIKKLEVLVLDGDFSHGD EGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFIDDVAFTDNSSWTRSRRF RIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPPRPDDEVWRLKNIRK DGPIHKRLESERVRNVQGFLNLHATNPEKLRKLVVMSDRLWKATLHHAKTCDFRAAEM MQVKQSSIEAYQNWDQLDEAETNKTASGNLGQAHEGSLQADEIGTVSGPHFQSRNQMD SEDSLSAAAVTEDADDALWSPCMTSDGHGLIMWKNNTSVWDQTN</aaseq>

Gene Sequence

<dnaseqindica>69..193#475..550#860..912#2421..2929#3105..3265#3394..3471#3625..3706#3804..4030#attgtaccgctctactgtccactctccatctcttcttcttcttctgaatttgatttcatccattgaggatgagtggtgatcaaggattcatggcgtttaggcggattcgaggcgacgaacaagaggaggatagggatgatggtgggtggcctgaggccaagaggaagagacagacggtgccatctttcatatcgttagttccgatctctgaatctgcatagtatccttctctgcatattaacattgcattatactgttcttaatgctcattgtgtgatagttttcacttttttctggttttatgaaatctgaagataagttgcatcctttgttttggggttccattttgtaggttgtgttattatactaggtttaccatggaaaatgtgtgtgtgtgtgtgtgggggggggggtatatgtgcactctattcattcttactgtttcatttctgaccacttttgatttgattgcagagttatgagaggagcaatggctgccgaaaagattcagaaactcggcctggatctggaaccattttttcggaaggcggtacgatacgaaaaattcagattcgaattcatgaagtattaattccttttatgtggaagcacaaagatagtatagctcaaatgccttcacaaaaatactatcaattcaggccaactttactccaaacagtccatctaatcatccaccaacttattctttctttgaaaatagaaaaaaaacactttattttgttcaatcaaatatataaaactcgtgtcatttgtgttaattcatcatcttaattgctaggttttttctgcacttcctttgagtctaaactgacttgaacattgtcctaccaatttaaaggttcaggaggaactggaaagaagcctttctaaacatggacacctactgtacaggtacaaacaaacttcttccactcacatatctaacatactattatgatcttataactcaacttattttctactctcttagtcccaaatataagaatctataaacgaatgagatatttcctagtactacaaatctaaacaaacaactgtctagattcgtagtactaggatgtcccattcaattttagattcttatattttgggacagatggagtagtactttgcaaatttttgtcccatttcttgttattattcatggccagaaacaacatcttcatgtagaggctggattgatttccattatcaaaaaaaaaaaaggaaaaagtatgaattacccctcccggaactatcacggtcgtccgaattacccccctaaaccataaaaccggacatttttcgcccccaactatgcaaaccagacgaattacccccctcgacccaatctgtggcggttttggtctacgtggcgtacgcgtggcagtccagtcagcaatttatttattagaaaataggtgggccccacctgtcatacacttttcctctctcttctcttactcttcctctctctcttctctcactctctcacgaatgacagcggcaggcggggcgcggcaagcggcagcggcggcgagggatgaggcggcgagcggcggcggcggcgagcggcagcggcggcgagggatgaggcgcagaggaggcggcggaggaggcgagcggcggcgaggtgtggcggaggaggcgagcgcggcggaggcgaggcgaggcggcggaggaggaggcgagcagcggggaatgaggcggcggcggcgaggcgaggcggccggcccgcgcacgagcgcccgctcctcgcggcgcccgctgccacgcccgccgccgccggttcccccgcctgccctggagggcgccgtcgccgccgtcacttcccccgcccgccctggagggcgccgccgccgccgcccccgttcgacctggagggcgccgccgcttccccgctcgccctggacgccgccgccgccgcttccccaacccaccctggacaccgccgtcgccgccgcggccgcttccccagcccgccctggacgccgccgtcgctgccccagcccgccctgacgccgccgcttcccccggccgccctggacgccgccgtccgtttccccctcctcgtctcacaccgcgcgccgccgtgcatcctccgccacgagagagagaccgagagagatagagggggtatgacatgtgggtcccaccattttttaaaaaataaaatgctgactggactgccacgtagaccaaaaccaccgcggattggatcgaggggggtaattcgtccggtttgcataattggagatgaaaaatatccggttttgtggtttagagggtaattcggatgaccgtgatagttcgggggtaattcgtactttttccaaaacaaaacccaaacatactatgcaccaacaagtttaattttttctctccacatatgaacttcttctgcatatcttgatctccagatctcctccaatgcttgtcaactccgtcgattcttcgctgaagctcgccttcgcgaagcggctccagctcccaatcttcaccaacaacaagctcgtcgacgtcgacaacaaccctctccaagtccacctccttcacatgagctccaccaccacctctcatcatcatctccccatgatcaagaagctggaggtgctagtcctggatggagatttcagtcatggtgatgagggatggagcagcgacgagttcagcggcgccatcgtgagggagagggaaggcaggaggccactgctcgtcggcacgctcaatgtggccatggccgatgatcatcttggcgttgcattcattgatgacgtggcgttcaccgacaactcgagctggaccaggagcaggaggttcaggatcggcgtgcgcgccgtggcggtggcgggtagcggcgatggcggcgagctgaggatccgggaggcggtgagcgagagcttcatggtgaaagatcaccggggagaatgtgggtatcaaagctactctgaatttgtctttgtgttagcaatgttgttgttgttgatgacgatgatgatgtcagtttcgtcagagtttgatgaactttgattattaattcgacagtttattctgaatttgattattagtatttgaattttttttctttatgcttgatttcacagcgtacaagaagcatttccctccgaggccagatgatgaggtgtggaggctgaagaacatacggaaagatgggccaatccacaagaggctggaatctgaacgtgtcaggaatgtgcagggttttctgaacctgcatgccaccaaccctgaaaagctcaggaaggtaattagtaaatgtagttagtctgcactaatcaatttgtgcatcgttttgtatctcttgaattatggaagatttcgttgttgtgttgatggatcattggttgattcgatccgggattgttcattcagctcgttgtcatgtccgatcggctctggaaggcaacactgcaccacgcgaaaacatgcgattttagagctgcagaaatggtaataagtcgtagtactactattctgcttctttcttcacaagttgtttggtcagaatatacttcatcttgttgtcgatcgatggtttatcgacataaatgaatgcaattagcttttatctgccaagtcatttgatctcattatttgttccagatgcaagtgaagcaatcttcaatcgaggcataccagaattgggatcagctggacgaagctgagactaacaagacagcctcaggtgcagaaaatggccagatgaagcacctgcatgattaaccttggaagttcagtaattaaccctcatccctaatctaaccttttattccatcttgtaggcaatcttggtcaggcacatgaaggatcactacaggcagatgagataggcaccgtatcagggcctcatttccagagcagaaaccagatggattctgaagattcattgtctgctgctgctgtaactgaagatgcagatgatgcactgtggagcccttgcatgacaagtgatggccatggcttgatcatgtggaaaaacaacacttcagtgtgggaccaaacgaactaagttcagcacaacctgattaattagatctccaattgtttgtgattttccctaatcatggagaaggcacaaatctgtacatattgacaccactttttttgcagcaacatgctgtttctttttccctgtgcactaagataccatgatatggtgatagtatgatataaagtaccttttttctattttggactggatagatatgtaatactactctccatgcatgataaattataatgctgcgtatagatagttagtaatctttactacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0309200, RefSeq:Os09g0309200