Os11g0112800

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0112800| Description = Saposin B domain containing protein| Version = NM_001072101.1 GI:115483814 GeneID:4349589| Length = 2397 bp| Defini...")
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Gene Name

Os11g0112800

Description

Saposin B domain containing protein

Version

NM_001072101.1 GI:115483814 GeneID:4349589

Length

2397 bp

Definition

Oryza sativa Japonica Group Os11g0112800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:591273..593669

Sequence Coding Region

591538..591619,592411..592649,592841..592920,593314..593356

Expression

GEO Profiles:Os11g0112800

Genome Context

<gbrowseImage1> name=NC_008404:591273..593669 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:591273..593669 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcaaagttgcttcctttctcctactcctgttaatcgtcacctgcggagctgctcaaggtcaaggcaacgattttgttgtccttgatctaaaaacaactgagatcggggaagatgctagcccaatgtacaaggagcaaattgcgtcgaccaagatacctgtaactcttctgaggagcaagcacagctcactgtgctcggcttgtgaaaacatcacaagtgaagctgtcaattttcttagtgaaaaacaaatacaagataagataaggacgatccttcatgacacttgttctcagacattctcctttgagcaaaagtgtcttgagactatggactcctatgcaactcttgtctttgcaaaaattgctgagatcaagccagctgcgttctgcaaacatgcaagaggatggttctgcagtacgtaccgctggttctggtga</cdnaseq>

Protein Sequence

<aaseq>MDFKVASFLLLLLIVTCGAAQGQGNDFVVLDLKTTEIGEDASPM YKEQIASTKIPVTLLRSKHSSLCSACENITSEAVNFLSEKQIQDKIRTILHDTCSQTF SFEQKCLETMDSYATLVFAKIAEIKPAAFCKHARGWFCSTYRWFW</aaseq>

Gene Sequence

<dnaseqindica>266..347#1139..1377#1569..1648#2042..2084#gtctttcccctttcgattccccctcctctcttccttcccctatcgtcaactagctcgagttgcttgcttgttccctctgctgcttcctctcttgtgtggattggattcccggcctggccctttctttttcctcttctctcctagattagaatcgtcgcgatttgattcctcaatctctcgatttggccgccctatctgttattaatccccaattgttcttcacacacatactcaattgcaggtcaattgcagccagaaagaggcgatggatttcaaagttgcttcctttctcctactcctgttaatcgtcacctgcggagctgctcaaggtcaaggcaacgattttggtacgccctaatcaaacaccttcccttcctcccttacctatgctcctcctgcatgcagattggaacgaacatgtcaaacattctcaagggaaaatgggacaatttttttattgtgcatagtaaagtatcattgtaaaatttatatatattggcagctgcagtgaatattattttatttggttgaagttcaacttgacaataacctgttactgatcctcttagcctggttattcattgcctgcaaaatgcatcctttatttttgttcaagctttgccatgcactctttacaaagtcccatgtttatctcatacattggtacacaatcgatgatatttttttccatagagagagaaaatgaggatagcctaatctcattgttggcatttctgatttctctcgtatgttaaacctgggcttgttattactcatttgtttatgctagttatggtatgttttgaacagtgttacttctttatatttctgcaacaccgattactgcttatgggtgcatacttcttcatgaaaaggattatgggtacatacaacaaggctagacatgcaatgtcgcataatgtgacagtattagctagttccagcttcacagaaatgagaatgtgcttcccaattattagcaatagtttactcttactttttaaatatgtaatagatattttttttgctgacgactttcatgatattttatttaggcaaaattagttatgtagcactgaaaattcacaatcttatttcgttctatttatttgtttgtttattattcattccttctcagttgtccttgatctaaaaacaactgagatcggggaagatgctagcccaatgtacaaggagcaaattgcgtcgaccaagatacctgtaactcttctgaggagcaagcacagctcactgtgctcggcttgtgaaaacatcacaagtgaagctgtcaattttcttagtgaaaaacaaatacaagataagataaggacgatccttcatgacacttgttctcagacattctcctttgagcaaaaggtaattgtttccttttgatttggtttgttagatcttatatattgtgtctgtatattagaaaatagaaatacaatcagtttgatcaaaagatatgacacatgtaggaattatattcccttactaaagtaccaagcaggaaagatattccatggacaatagtagtttaacatgatcactttgtatttctgcagtgtcttgagactatggactcctatgcaactcttgtctttgcaaaaattgctgagatcaagccagctgcgttctgcaaacagtatggcctctgcagggacatggctcttttatcagctgttaaaagtgaaagcacatgcttattctgccaccacatcatcgatgaaattacgtccaaactgaaagatcctgatgcagaggtgattgattttccctcgattacacaattacatcgataataaataatgagcatacatttggaccctaacatcttgtgtgtgatgtttgcagtttgagatcattcaattactactcaaggaatgcaacaagattgaaggtcatcagcagcaggtaaaacatttgaagtactttgtaaaaattctctctctctgacccaataatgctagtttggttaatgtacatgtctacacgagtgacatgcgtttgatgaaatcgtacgttatcttgttgacagtgcaagaggatggttctgcagtacgtaccgctggttctggtgaacggtgagaagttcctggagaagaacgatgtgtgcgcaatgatccaagcctgtgatgcaggcaagaggaaggcactcaacttgttctctgcacggaaattggtgcgtgacgcatgaagtagtaggaagcgtgcgtacacgaatcaagttgtggtaggcatggagaagacgaagtgatggcagcttgtacatatggttattattaatgaaatattaggcaatacactatgtgaaggggatgatacgataattatgtgcacatacttgtgctgctatctgaattctgaaagtaatgctatgattacttttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0112800, RefSeq:Os11g0112800