BGIOSGA032978

From RiceWiki
Revision as of 05:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032978| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032978, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032978

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032978, complete gene.

LocusTag

OS10G0429500

Ensembl Transcript ID

BGIOSGA032978-TA

Ensembl Protein ID

BGIOSGA032978-PA

Length

1876

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13622276..13624151

Sequence Coding Region

13622276..13622608,13622673..13622984,13623753..13624151

Genome Context

<gbrowseImage1> name=IndicaChromosome10:13622276..13624151 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:13622276..13624151 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCACCAGGGGAACAAAGCGGAAGAGAGGGGAGGACATCCATCCGTCGACTGCAGCCAAGGGGCAGGCTGTGCCTTTGGCGTTCGCCGCACCGGCTCCTCACGGACTGCTCATCAATCTGGATTCGGGGACGGGATCGAGCGCCTCTGGCAAATCTGACGCTAGCTCTGCCCCTCCTTGTGACAATGACATCAATGTGGCCGCCCGCTTCCTAACAGCCGTTTGTGCGACCTCCCCAGAAGGCGTTCGCTCTTTCGTCCGTCGTGTGTCGCCGGCGACGGTTGTTCGGTCCCTCGATTTGGACCTGATCCGGCCCATCTCGCCACAAAAGATGGCGGAGGGTAAAATCCGATGGAGCGACGATGAAATTGGCATATTTCTTGAGGCATGCTTGGAGGAGTTGTCCGCAATGACCATAACATCCACTTGTCCAAAGCCGCAAGGCTACAAGAACCTCATACAGAAGATGAAGGAGAGAATCGGAAGAAACCTCACCAAGGATCAGGTGAAGTACACATGGCGTCAATGTCGTAAAAGGTGGATGCTTTGGACGTGGCTGGAATCAAAGGCTACCGGCATTGGCCGTGACCCGATAACTCAAGCCATTGTTGCTGACGACGATTGGTGGGAAGACAAGGACCAGAAAAAGGACGGAGCTCGTGTCTTCAAAGATTCCCCTCTCAAGCACATCAACCTTCACTGTGCTATTTTTTCGGGGTGCACAGTGGTAGGGAACCACTCTGCTATTGCAGGCGCAGCACCAGCAACTCCTCAGCAGCCAACTCCAAGGCCCAACATCAATATCTCACAGCTGCTAGCTCAACAACAAAACATTGCGACTCCAGGAGTTTCAAGTGCAGGAAAAGGCAAGAGGCTAGCAGATGAAGCTGGCACTTCGAGGGGATCGGCTTCAAAGAAGAGTCGAAGTGACTCAGCCGGTGATGCCCTGCACCGGCTAGCTGATTTGCGAGTGGAGTCGATGGAGAGCTGTTCCCGGAAGGTGGAAGAGGACAGGGCTAGAAGTGCAGCAGCTTGCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MGTRGTKRKRGEDIHPSTAAKGQAVPLAFAAPAPHGLLINLDSGTGSSASGKSDASSAPPCDNDINVAARFLTAVCATSPEGVRSFVRRVSPATVVRSLDLDLIRPISPQKMAEGKIRWSDDEIGIFLEACLEELSAMTITSTCPKPQGYKNLIQKMKERIGRNLTKDQVKYTWRQCRKRWMLWTWLESKATGIGRDPITQAIVADDDWWEDKDQKKDGARVFKDSPLKHINLHCAIFSGCTVVGNHSAIAGAAPATPQQPTPRPNINISQLLAQQQNIATPGVSSAGKGKRLADEAGTSRGSASKKSRSDSAGDALHRLADLRVESMESCSRKVEEDRARSAAACI</aaseq>

Gene Sequence

<dnaseqindica>1..333#398..709#1478..1876#ATGGGCACCAGGGGAACAAAGCGGAAGAGAGGGGAGGACATCCATCCGTCGACTGCAGCCAAGGGGCAGGCTGTGCCTTTGGCGTTCGCCGCACCGGCTCCTCACGGACTGCTCATCAATCTGGATTCGGGGACGGGATCGAGCGCCTCTGGCAAATCTGACGCTAGCTCTGCCCCTCCTTGTGACAATGACATCAATGTGGCCGCCCGCTTCCTAACAGCCGTTTGTGCGACCTCCCCAGAAGGCGTTCGCTCTTTCGTCCGTCGTGTGTCGCCGGCGACGGTTGTTCGGTCCCTCGATTTGGACCTGATCCGGCCCATCTCGCCACAAAAGGTAATGCCCATTGTAATTTGTTTTTGATCCATTGCATTTGTGCTTTGTTAACATTGGGTGGTAGATGGCGGAGGGTAAAATCCGATGGAGCGACGATGAAATTGGCATATTTCTTGAGGCATGCTTGGAGGAGTTGTCCGCAATGACCATAACATCCACTTGTCCAAAGCCGCAAGGCTACAAGAACCTCATACAGAAGATGAAGGAGAGAATCGGAAGAAACCTCACCAAGGATCAGGTGAAGTACACATGGCGTCAATGTCGTAAAAGGTGGATGCTTTGGACGTGGCTGGAATCAAAGGCTACCGGCATTGGCCGTGACCCGATAACTCAAGCCATTGTTGCTGACGACGATTGGTGGGAAGACAAGGACCAGGTATGTCACCTACCCTTATGTTGTGTTCGGTCGAACTAGGAAGATAGTGATTTCCATACTGATTTGCATTAACACAAGGACCCATGACATTTGTTTAGTTCATGAAATCTCCACAGTTATCTATTTTTAGGTATAATCATACATATTGTTCATAGAAAGTGTTATGTACCTTTGTAAAACCTTGTGTTTCTAGGCTACAAAATCAGAATGTAATTTTTTTTGCTATAATGAATGGGGGTACAATTTCTCTGCTGCATTCACTACCTTCCAATAAATTGATTAGGAAGCAGCAAATGCATGGTTGGTACTATTTTTATTATTCTCTTGTAGGTCTTTTCAACAAAACTGAGCCATATCTTGAGATATTTGGTATTCCTATGCTATTGTTGATGCCATAGTTTGACATGACATCAACCTCTATGTGACATGTCACATTGCTTACATGGCATAAAGTTTTTTGATTTTTAGTCTGCTCATCATCTGCTATTATTGTCAATGCATATCAATATCATATAGTACTTCCTCCATTTTCTTGAATTAGTTAGACCGTAAAATCTAGGTAAAATGTTACCTGCAGTCTGCAGATGTTAAAACATGGTGCCACCAATAATAGCTATGTTGCTGCGTACATTAGTTATGTACTTGTATGCTGCTGTCTTTTTTTTAGTTCAAAAAGCGTCAACAAAATGCAAAAATGAAAATCGATTTAAGAAACTACTTATGTTCATTTCAATGTAAATTTATTTTGTTACTCAACCATTTTCGCAGAAAAAGGACGGAGCTCGTGTCTTCAAAGATTCCCCTCTCAAGCACATCAACCTTCACTGTGCTATTTTTTCGGGGTGCACAGTGGTAGGGAACCACTCTGCTATTGCAGGCGCAGCACCAGCAACTCCTCAGCAGCCAACTCCAAGGCCCAACATCAATATCTCACAGCTGCTAGCTCAACAACAAAACATTGCGACTCCAGGAGTTTCAAGTGCAGGAAAAGGCAAGAGGCTAGCAGATGAAGCTGGCACTTCGAGGGGATCGGCTTCAAAGAAGAGTCGAAGTGACTCAGCCGGTGATGCCCTGCACCGGCTAGCTGATTTGCGAGTGGAGTCGATGGAGAGCTGTTCCCGGAAGGTGGAAGAGGACAGGGCTAGAAGTGCAGCAGCTTGCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032978