Os11g0113200

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0113200| Description = Conserved hypothetical protein| Version = NM_001072104.2 GI:297611089 GeneID:4349592| Length = 5808 bp| Definition ...")
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Gene Name

Os11g0113200

Description

Conserved hypothetical protein

Version

NM_001072104.2 GI:297611089 GeneID:4349592

Length

5808 bp

Definition

Oryza sativa Japonica Group Os11g0113200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:608582..614389

Sequence Coding Region

608958..610562

Expression

GEO Profiles:Os11g0113200

Genome Context

<gbrowseImage1> name=NC_008404:608582..614389 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:608582..614389 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctgccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcctaccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctcttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgcctccgcgaggagcgccgcgcccacgccctccagctccacaagctccgcaagaccgccacccgccgctgccgcaactgcaacaacccctaccgcgaccagaaccccggcggcggcaagttcatgtgctcctactgcggccatgtctccaagcgccccgtcctcgacctcggccctgccgggaccctccccaccggctggccctgcacccaggattggccaaatgctgccggtgaccctgcctactggctcgacctccgctgctcctccgataacctgtactcggggttctcgtggcgcttgttctcttccttctgcgtcagcatgaggtggttctggagggaagtgctcagatttggctcctcgggggacggcgatggcttgggccgagatggtaaaagattagcaaaagaaggggagaacggagcaaaggctgaggagagcagagtcgagaaggcgaaaaggaaggcggaggagaagaggttggcgaggctggagaaggaaatgctagaggaggaggaacgcaagcaacgggaggagatggcaaagctcgtggaggagcggaggaggctaagggatgagaaagcagaggctgaagagagatccaaaggcgccacacctgttggggagaaggatcctcggaaggaagtggaacgtagacggcaggagaggaggaggaaggacgagaaggataagggatcaagcaagagcaattcagattgcgaggatatcgagagaagagtaaccagggaaggggagagaaagcgggattctgatagaagaaatgagccagagaagcgggatgcaacaagagttggcgctgagggtcataagccctataattttgatgctaacaaccagggtagtaagacagtacagagcaaggcaaagtactttggccgtatgacaggcggtctattatcttcttcaagaggttttggtggcggctccttttttggtagaagtgctcagacctctgctcctcaagttaacaaggtgactaaaccgcttgttactgtaactgaccagagtaatgtagtcaaaagagatacccaacctcctgcaacagccaaatctgctactgctggaggaacgacaaattcatggactaatgttcatcgacctgtgagtaacaaaggcattattaattgctgcagcagtctatctgttacgattacgacatatgtcattaattgttttcaccctgactatcgtcttacaaataccatttgcatttttgttatgcttttatgcaggttagtccaaatgtgcagtcacagcctactggccttaaaaagtcatggcaccagctgtttagtcgctcagcatctgtgtcaccttgtcctgatgttcctgctgcagcccgtgaaatga</cdnaseq>

Protein Sequence

<aaseq>MCILCAVQRWSRRVATMLPWLVLPLILLWALSQLLPAAYRFEVT SPRLACVSVLLLTLFWYEILLPRLSLWRARRSARLREERRAHALQLHKLRKTATRRCR NCNNPYRDQNPGGGKFMCSYCGHVSKRPVLDLGPAGTLPTGWPCTQDWPNAAGDPAYW LDLRCSSDNLYSGFSWRLFSSFCVSMRWFWREVLRFGSSGDGDGLGRDGKRLAKEGEN GAKAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAEAE ERSKGATPVGEKDPRKEVERRRQERRRKDEKDKGSSKSNSDCEDIERRVTREGERKRD SDRRNEPEKRDATRVGAEGHKPYNFDANNQGSKTVQSKAKYFGRMTGGLLSSSRGFGG GSFFGRSAQTSAPQVNKVTKPLVTVTDQSNVVKRDTQPPATAKSATAGGTTNSWTNVH RPVSNKGIINCCSSLSVTITTYVINCFHPDYRLTNTICIFVMLLCRLVQMCSHSLLAL KSHGTSCLVAQHLCHLVLMFLLQPVK</aaseq>

Gene Sequence

<dnaseqindica>377..1981#gcctcgcgagaacagaaaaaagaaaaaaaaagaagaggaagaggggaaggcaatccgaaaggaaattaggctagggttttcgccatggctaccacccaccacctcgagctccccctctccattcccaatctctccgactcctcctaattaatcccgtattcccaccccccaagccaaggacagcatctcgcatccgcgtccttcaattgatttgattgggttccccccctccatttcagggtttcgtttcgcatcgcagcaatcttcccgacccagcaagcttcttcttcccttgggtccgttagggtttgagattgagaggggcggcgctggcgatcgagattggtacggcggcggaggcggaggtgggcggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctgccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcctaccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctcttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgcctccgcgaggagcgccgcgcccacgccctccagctccacaagctccgcaagaccgccacccgccgctgccgcaactgcaacaacccctaccgcgaccagaaccccggcggcggcaagttcatgtgctcctactgcggccatgtctccaagcgccccgtcctcgacctcggccctgccgggaccctccccaccggctggccctgcacccaggattggccaaatgctgccggtgaccctgcctactggctcgacctccgctgctcctccgataacctgtactcggggttctcgtggcgcttgttctcttccttctgcgtcagcatgaggtggttctggagggaagtgctcagatttggctcctcgggggacggcgatggcttgggccgagatggtaaaagattagcaaaagaaggggagaacggagcaaaggctgaggagagcagagtcgagaaggcgaaaaggaaggcggaggagaagaggttggcgaggctggagaaggaaatgctagaggaggaggaacgcaagcaacgggaggagatggcaaagctcgtggaggagcggaggaggctaagggatgagaaagcagaggctgaagagagatccaaaggcgccacacctgttggggagaaggatcctcggaaggaagtggaacgtagacggcaggagaggaggaggaaggacgagaaggataagggatcaagcaagagcaattcagattgcgaggatatcgagagaagagtaaccagggaaggggagagaaagcgggattctgatagaagaaatgagccagagaagcgggatgcaacaagagttggcgctgagggtcataagccctataattttgatgctaacaaccagggtagtaagacagtacagagcaaggcaaagtactttggccgtatgacaggcggtctattatcttcttcaagaggttttggtggcggctccttttttggtagaagtgctcagacctctgctcctcaagttaacaaggtgactaaaccgcttgttactgtaactgaccagagtaatgtagtcaaaagagatacccaacctcctgcaacagccaaatctgctactgctggaggaacgacaaattcatggactaatgttcatcgacctgtgagtaacaaaggcattattaattgctgcagcagtctatctgttacgattacgacatatgtcattaattgttttcaccctgactatcgtcttacaaataccatttgcatttttgttatgcttttatgcaggttagtccaaatgtgcagtcacagcctactggccttaaaaagtcatggcaccagctgtttagtcgctcagcatctgtgtcaccttgtcctgatgttcctgctgcagcccgtgaaatgaacgggcaaccagaaccatatggagcacaaattagcaatgctcaaatcttcctatcgcagtatccccctctggacagtaaccctagttcaagccgctgtatgcaatttccaggttttccaccagtgaatggagcacctgccaacatgtcactctctcattttccagctggacatgtgccctactattgtgagccagaaccaacagtgtttgaagaaccagaacaatttgaggacccatgctatgatcctgatgcaattgcgttgcttgggccagtttcagagtccctagataactttcctctcgacttggatagcgggttcatctctagtgacatcaccaaggaaacacatacgaagccttcaccaatcgaatctcctctttcaagatcacgtacattcgaggataatcctattaggcactcaactggaaaagggcctaatggttctattttgcctgaggctagcaatgaacaggggggcacatggcaaatgtggggcacgccattagttcaagaaagtttaggtctacgaggtcctcagactgagtggctcctaccaaacgcaaatcaatttaaccatggtgtcagtcatttgaatggtggaacaagaagctcagtgggttctggtttggatgacaatgatttatggctgcagaaagcgcctttccagcaaatgcctcttgatacaaggagtctgttcctttcacatgatgtctcagagaatgctatacacaacaatttggattttggatcaccaaacaaatcagcccgtttgcaccccattgggccacctggtcattcttggtccaagtaagtatgttgtgacattcttgtaccgctttcagtattttctgcagcaatgaagcatttgcttccattatagacaacaattcgataaccttggtttgagctagaaacatggtcataacttacaacagaattaccctaccccacactttgattatgtgagcataattttcatttaggtcataaaaaatcattacgaatgtagcttcgtgtatcaatacacataaggaccaaatgagatcaaattcacagagtattcttacaaggaataatcatatgccataggggactcctaaatttcttttgtcataatgactaggatgggtgctaccactttatctataaaaaatggggcaagagtgataccagttaagagcaaacaatacactctgagtctccaatttagaaggaatcaagggagcaaatacataaatttccataatagcaatttttgcccccaaaagctggggaccatggcccagtttgaccatgccttgcagtggttgcatccttatatggatggttattttggctttagacaaataagaggcattagtgacagggtgcaagttttctgtggattctgtttatgagagacacatcacatggcatgcaattatgtgtttgtgcatttgttgtatgaaacacttgaatatttctttgttctttcttttaaagaatgtattcttatatatttctatatttaatatggaactatggattgatgatgatatcatattaaaataagggattatgtctagtggttcttggtgacgctccactggcattccgaagtagtattagctagaaggaatgatgacgccatagaaattaaatgtactgccaatctggaacctgtttcaacagtccttgtctggctctattctttgggttgtttcgcggtcagcatggggatgtgggactgtatattactcaatggttgagagtggagttcaattgactgtctgtccaaactaaataactgataagaaccacgcctgaatccatggatggatgagtgttgtttatgtgaaatttattaactggttgtttcaccatagaaaaatcaatattgttttttggatatatatatttttacattgtagatgtctgacacatttgtttagaaaatgtgttcagttcataatgttgattggtttgcctgcatctcttttgacttttttgtgaatgacagaacgatgcatgttattggcttgttggaaaaactgttttatagttcaaacaaaccaagtttcatgtttgacggtgccattattttgcttattcacggagtgaaacggcatatttgcaaacgaaaagcaatttgtgaataaaacttttatatacgtgttcttagcaatctaaaagcaaaggctgaaaaataaacttcgatgaaaaaacctcaaaatcagctccaaatttaaggttgaaaattcaaattttggctgataagcataagcataaacgaaaagatgaggccgtgaggcataagaccaagcatcaggtccaagataatgaaaacttaacagggtttgcttttatacttcggtgtttttttgtggagtaggtctctgacatacagaactgttgccatgtaaatagagcaggcatgatagattgatgtaatgttggcaacttggcagagcaatcagttatgcgctcactgttcagtttctctagcaatttgtagctatcttccatgttatcaatacacaagcttttgtgattagactgccatttgtttttcttttaaaagcaaaaaaaatgcttgttttctaaccgggttgattttcgggggtttaaggtaccctgttgaactgtaaacaaataattgaaagtcactaaggacgttcctttggaaaccaggtgcaaagattttctcactagttatatttgcaatcaaagatttagtcatttagtttgctgctttatctgctggattcaacttgtggccattgggctgcattatgtgatgatagttagctgcattatctaagcagtaagcaccagtaaatacagttactagatcacgtgtgggttatgcactggccaggtgatatacaggggtttccaatgtgctaacgtggatgttgttttgaattgtttattgttgtcatcacttgaaactgccgataaattcaccattcgttttttcccttgcctgtactgctctggtgggttgaacatatatgagatttagttttttttttgacatatatgccttgggcctaactattaactaagaaattgcatttacatggtctgagctaaaccatgaatatatcctcgaatagttggattggacgagttgctagcttggaactaagtacagggccctatacaaatggaatacatgattgtgtaatccttgttcttttaccccttcctccccaccttggtttgtggccgttgggattttatggttggcttggctcttggctgtactgcattttcagaagttgcatggtgaactgtgtatacctgaacttttctggtattcttcgacatgtgtttggtgttgaaaatattgttctaggcaactaataataatttgtatgctgcaactgatggttcaatttttattacatctgttgactagtcatgcattattaaaaacagattcgttcatcttcgtggaactcagactttgtctggttatgatttatgcagggaggcagtggtgctgaatggacctcaggaagctagtaagatttgctcatcaacaggggcacatgttggcggtggctttttttcaactaatcctgatgtacagtcagtttggtcgttcaatcaaaaagagacaacatagaacatatagaacacaatgtcaagccaatgcttccttgcctcatttgagtttaggaagttgaggtgatatgttggactgtattccttggacgtgaatgatagtccccttttatttagtatcacttacctgttaacatgcgttagcattaggtctctcacctgatgttttggcgcatttaaccttttttttggattcaatgcaaaatgggctggg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0113200, RefSeq:Os11g0113200