BGIOSGA033073

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Revision as of 05:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033073| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033073, complete gene.| tag = OS10G04...")
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Gene Name

BGIOSGA033073

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033073, complete gene.

LocusTag

OS10G0456500

Ensembl Transcript ID

BGIOSGA033073-TA

Ensembl Protein ID

BGIOSGA033073-PA

Length

6297

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15246734..15253030

Sequence Coding Region

15246734..15246910,15247971..15248222,15248349..15248416,15248509..15248624,15248721..15248826
,15248909..15249065,15249142..15249237,15249722..15249770,15249871..15250130
,15250252..15250424,15250617..15250737,15250848..15250900,15251013..15251142
,15251296..15251441,15251812..15252000,15252242..15252474,15252709..15252857
,15252968..15253030

Genome Context

<gbrowseImage1> name=IndicaChromosome10:15246734..15253030 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:15246734..15253030 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTTTCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTAAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGTGGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAGGACATATTTAGACGAAATGCATTGTATCTATACAAGTTGAATGTTGCCAATGGGTCAGTCGGTCAGATAACAGCAATAGCTGACAACGGCATACCATTATCTGAACAAGATGTGCTCTTTGTTCGAGTCGTCTGGATTGATACTTCAGGTCAACATAGGTGCCGCGTTGTGCCAGCCGGAAGATTTTATGAAATTGCTAGGAAAAAGGGTATTGGTCTGACTTTTGCATCGATGGGAATGACTTCATTTACTGATGGCCCAGCAGATGGAACAAACCTTACTGGTGTAGGAGAGATCAGGCTTATGCCGGATATGTCAACACTATTGAGGCTTCCATGGTCAAGACGCGAAGAAATGGTAATGGCTGAAATGCATATAAGGCCTGGGGAAGCCTGGGAATACTGTCCCAGAAATACCTTGAGAAAAGTCACAAAAGTTCTGCTAGATGAGTTTAATGTGACAATGATGGCAGGTTTTGAGAATGAATTTTTCCTACGTAAAAAAGTAGTAAGTGGTGAAAAGGAGCTGTGGGTCCCATTTGACAATACCCCCTACTGCTCAACTACAGCATTCGATGGTGCATCATCTGTGTTGCAAGAAGTATATACTTCTCTTAAAGCGGCGGAAATTGTGGTTGAGCAGCTGCATGCTGAAGCTGGAAAAGGGCAGTTTGAGATAGCCTTGAAGTATGTGTTGTGCACTCTTGCTGCTGACAAACTGATATATGCCCGTGAGATTATTAAATCAGTTGCTCGAAAGCATGGGCTACTTGCAACTTTTCTTCCAAAACCTGACTTGAATGATATTGGATCCGGTTCTCATGTGCATCTGAGTTTATGGGAATTCGATCAGAATGTGTTCATGGGATCAAGTGAATATAATTACTATGGAATGTCAAGAATCGGAGAAAGCTTCCTTGCTGGAGTATATCTCCATCTTCCATCAATCTTGGCATTCACTGCTCCTCACCCAAACAGCTACAACCGAATTCAGCCAAACACATGGAGTGGTGCATATCAGTGCTGGGGGAAGGAGAACAGGGAGGCTCCACTGAGAACTGCATGCCCACCTGGGATACCTCTTGATCTCGTCAGCAACTTCGAAATTAAATCCTTCGATGCGTGCGCAAACCCGCACTTGGGCCTTGCTGCTATAGTTGCTGCTGGGATTGATGGACTCAGGAGAAGCCTTACGTTGCCTGAACCAACTGAATCAAACCCTGCAGGTTATGCCTCCAACTCCAAGCTCAAAAGGATGCCGAAGGACTTGATGGAATCTGTCGAAGCACTAGCTGCAGACAAAATCATGCATGAATTGATCGGCGATAAACTTGTCACTGCCGTTATTGCTGTACGAAAGGCTGAGATTGATCACTACGAGAAGAACCCTGCAGCATTCGCCGATCTCATTCACCGTTACTAG</cdnaseq>

Protein Sequence

<aaseq>MEMESKYAALRRAAEEAAAVDAHAHNLVADGSAFPFLRCFSEADAADALALAPHTLSFKRSLRDIAALYNCEASLEKVEEFRRAEGLSSISSKCFKAANFSAILIDDGIDFDKMLELEAHKAFAPTVGRILRIEKLAETIINDESFSASSWTLDSFTEIFVTKLKSVANKIVGLKSIAAYRSGLEIDPNISKTDAEDGLRKELSGQRPLRITNKNLIDYLFTCSLEIAVSYHLPMQIHTGFGDKDLDLRKCNPLHLRAVLEDTRFSKCQIVLLHASYPFSKEASYLASVYSQVYLDFGLAIPKLSVQGMTSSIKELLELAPIKKVMFSTDGYAFPETYYLGARRARDVVYRVLSAACEDGDLSIQEAIEAVEDIFRRNALYLYKLNVANGSVGQITAIADNGIPLSEQDVLFVRVVWIDTSGQHRCRVVPAGRFYEIARKKGIGLTFASMGMTSFTDGPADGTNLTGVGEIRLMPDMSTLLRLPWSRREEMVMAEMHIRPGEAWEYCPRNTLRKVTKVLLDEFNVTMMAGFENEFFLRKKVVSGEKELWVPFDNTPYCSTTAFDGASSVLQEVYTSLKAAEIVVEQLHAEAGKGQFEIALKYVLCTLAADKLIYAREIIKSVARKHGLLATFLPKPDLNDIGSGSHVHLSLWEFDQNVFMGSSEYNYYGMSRIGESFLAGVYLHLPSILAFTAPHPNSYNRIQPNTWSGAYQCWGKENREAPLRTACPPGIPLDLVSNFEIKSFDACANPHLGLAAIVAAGIDGLRRSLTLPEPTESNPAGYASNSKLKRMPKDLMESVEALAADKIMHELIGDKLVTAVIAVRKAEIDHYEKNPAAFADLIHRY</aaseq>

Gene Sequence

<dnaseqindica>1..177#1238..1489#1616..1683#1776..1891#1988..2093#2176..2332#2409..2504#2989..3037#3138..3397#3519..3691#3884..4004#4115..4167#4280..4409#4563..4708#5079..5267#5509..5741#5976..6124#6235..6297#ATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGGTACACATGCAGTTCTCAGCTCCGTTTATCCGCACGGCCCCGTTGGGTCGCCTACGCCGCTTACTTCCGTGTGCTGCTCGAGATCGCGACGGCTACGACTTGTGCGCTTCCCCTACTCTGTTCGTCAGACTAGTTCGCGTAACAGTGTGTGCTAGATTGAGTCGGCTGCAGAGTTTTCATTTGCAAAATAAAAAATATATACACTGTTGAGTGATGCAGATAATTTTTGCAGTGAAAATTTACTGTTGTCATCTGAAAAAAAAATGAATCACTGTATTTCATTGGATTTGGTTACTCCGAAAGCCGAGTCAACAGTAATTCTGTCTTAATCCAATGAATTTTTTCCGAGAGAAATTTGTGTTCAACTCAGGTTCAGAACTGCAACCACCAGTCCACCACCACCGCCACCACTGGTGGATTTCGGAGAGTAGTTTCAGGGCAGAAATGAAAACGGAATGCGAACTTTATCGTCTCCATGATCCATTTTATTACCGAGATTGGCGATGTGGTTTATAGTGGAATATGCGGAATCCGTCCTTCTCTTTTAACTGGTGGCATGGCAGAGGCCACAGGCTTTATGTCGGCTTTGCCAATTTCCCATAGTAGCAGCACTGTTGAGTAGTACACGCCTTTTTTTTGTCTCGTCTCTTTGCCCTGTCAAGGAGAGCTCAGTGGTGGTGGATGTGGGCACAGAGGCGTGCGATGCGAGCAATGGAATGGAAACGTTGCTAGGGTCCATGACACATGAGAGGAGTTACTGGGCCATTTCGGCATGGTTCACTGCTTCACTGTTCTACTTCTGTCTGAGAAGTTATGTGCGTTTCAGCAGGTGTCCATGCCGGCATGCATGCATGTGATGTGGTCATGTGGACCACTTTTGTCTGTACTCTGTGCAGTGTTAGGATGCTGTATATGAGTCGTAGCTCTCTGTTTGTTCCAACCTGCAAATGTTGCTAGTACATTCTTGCTTTCGTAATGCTGTATTCGTAGTTGTTTCGTTGCAACTAAGAGTATGGTTTTTAGAAGCTCATTAGATCGTTTGGAACGTCGTGAAATGCAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTTTCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTAAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGTGAGTGCATTTTTTTTATCGTTCTGACCTGTCTATTTTCTCCAAAGTTGTACCTTTTCTCCATTTTACAAAGTTTGTCAGCTTTCATAATTCTGTTAGCATCTATGAGTAATAAACTTTTTTCAGGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCATATCCTCCCCAGTATTTGTTTTCAGGCGCAGTGGATAGTTCTTGTTGTATACTGTTTTAGAATGTATTGATTTCCTTAACTAATTTATCACAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGTGGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTAATATATTTTTTGCGGAGAGAGAGAGGAGAGAGTGAGAACACATTGTTGGATCCATCAATATTTTATACACCTGGACTATTTCATCCTTTTCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGGTGATGACAACATTTTAATCCTAAAATATGATTATTCTGTTTTAAACTTTCAATATTTCAATTAATTTCCACCCTTTTTCAGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTGGGATCCTTATCTGATTGATGACTTATGCATTGCCTTTGATGGACTTTATGTTTTAATTGTTTAAAACAAACAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTAAAATCTCTGTCTTCTGGATAATTGCTTCCTTTTTTTTTTTTTTGAGGTTATTGAAACAGTCCACATTTTACCTGTATGTTCCACTGATTTATGGAAAGCTGAACTGTGTTTTATTTTCTGGCAACTCAATATCATATTGCCCCCCCTGTTTTACCATACCATGTAAATTATTGATAATGAATAATAGAACTGATAAATACAGAATCCCATTAACAATTGTTGCTTTGTAGGATTACTGCAATATTTTGCAGTAGAGGTCTGGGAATTTCTTTCCCTCCTACATGCTTGAAGTGCATCTAATTTTCATTATGTTAGTTCTCATTGTAGTATTCACTCAAGGCGCCTTTGTAAAAGAATTTCATTCTGATCTATTTTGCAAGAACCTGGACGAGTGTAATATTTTCACTTATATATCTGCAACTAGTTTTTGCCCATTTTGAAGATATGCCATGCTTTACATTTCTAATTTTATCATTTCTAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTACATTCCTTAGCCATAATTGTTCCATAAGTTAAATGAAAAGTCATTATATAGTAAAGCTCTTAAAAAAATGTGCAAAACTATGGAGCTTGATTTACAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAGGACATATTTAGACGAAATGCATTGTATCTATACAAGTTGAATGTTGCCAATGGGTCAGTCGGTCAGATAACAGCAATAGCTGACAACGGCATACCATTATCTGAACAAGATGTGCTCTTTGTTCGAGTCGTCTGGATTGATACTTCAGGTCAACATAGGTGCCGCGTAAGCATATCTTTCCTACCACACACGGTTTTGCCATTTCTTGTAGTTTTATGGCTTTAAGTTATCCTGTTACACATGTTCTCTTAAATTTTATTTATTGCTCAAAAGATCATATTTTCAGGTTGTGCCAGCCGGAAGATTTTATGAAATTGCTAGGAAAAAGGGTATTGGTCTGACTTTTGCATCGATGGGAATGACTTCATTTACTGATGGCCCAGCAGATGGAACAAACCTTACTGGTGTAGGAGAGATCAGGCTTATGCCGGATATGTCAACACTATTGAGGCTTCCATGGTAAACTTGATTTTTTATGTATATTTCAATGATACTCTTTTCAAGTAGGCCACCTGTTCACCCATTATGACACTTTTTATTTTCATCCTTGTTAGTGTTTACTAAAGTTTACTTAATTATGGCAGCATTAGTTCTTAATTGAATAATGTCACTTCTGAACATCATATAATGGTGGATTGCTGTTTGTGCAAGGTCAAGACGCGAAGAAATGGTAATGGCTGAAATGCATATAAGGCCTGGGGAAGCCTGGGAATACTGTCCCAGAAATACCTTGAGAAAAGTCACAAAAGTTCTGCTAGATGAGTTTAATGTGGTAACTAAGCCCATACTTATGTTTATATACCTTCAGGAAGTATATTTGTCTTGTTGATTCTATTGGTTCGTTTATTTTTCTTCTAATGCTTAGGTGTTTGTCATTTTCAGACAATGATGGCAGGTTTTGAGAATGAATTTTTCCTACGTAAAAAAGTAGTAAGGTACACAGTTTTTCCCACCTCTATAAAATTAATATGTTAAAAGTTCCATGTTATTTATGCTAATTGATAATGGCAAATATGCAATCGATTCACTAATTAAATGATCATTCAGTGGTGAAAAGGAGCTGTGGGTCCCATTTGACAATACCCCCTACTGCTCAACTACAGCATTCGATGGTGCATCATCTGTGTTGCAAGAAGTATATACTTCTCTTAAAGCGGCGGAAATTGTGGTTGAGCAGGTGAGTAGTTTTATCATTTTTGTTAGGCGCTACTTTTAGAACTAAAACTTTTGTTATCATTTGATTACCTTTGGATCATCATATGCAATGTTGTGGTGATGGATTGTATTTCTATGTTACACCTTCATTTTTCCATAATAAAAAATGTAACAGCTGCATGCTGAAGCTGGAAAAGGGCAGTTTGAGATAGCCTTGAAGTATGTGTTGTGCACTCTTGCTGCTGACAAACTGATATATGCCCGTGAGATTATTAAATCAGTTGCTCGAAAGCATGGGCTACTTGCAACTTTTCTTCCAAAGTAAGTTGTTGGATCAGCATAAATATTGTTCAATTTTTCAGTTATCTGCATACAAGTCCTATGTGTTAGACAAACTTTGTTTCTTCAATGTTATGATCATGGACGAATAACTATAGAGGTTGCTTAAGCTGAAAATGAGTATGTTAAACAGCATATCTCTAATCTATACCCTATTTTACCTGTGAAAAAAAACATTTTTTGGATAAAGAGCACAGAAATGAGCTACAATTAGTTAAATAAAAACACTTCCTACCTCTGTCATCCCAATGTTTTACAGTCTGAAACTATATGTATGTTGCCTTTCTGGAAAGTGAGACCTCTGGCTTCAGTATCTCGTATCTGATAATTTGTTTTGCTTGACACTTTCCAGACCTGACTTGAATGATATTGGATCCGGTTCTCATGTGCATCTGAGTTTATGGGAATTCGATCAGAATGTGTTCATGGGATCAAGTGAATATAATTACTATGGAATGTCAAGAATCGGAGAAAGCTTCCTTGCTGGAGTATATCTCCATCTTCCATCAATCTTGGCATTCACTGCTCCTCACCCAAACAGGTAATATATGTACATAGTAAAGCAACAAGATTACCTATTCAATTTGATGAAAATTCTTATAACTCAATTTGGTATCAGTATCTTGCACAAGCACAGAGTGTGAACGCATTTTGTTCTCTAGAATCTGGGCAAGTCAATATATTTTGTTTGATAAATACCAGATTAGCTAGGAATCAAATCAAATCATTGTGTCATGCACCCCCTATTTAACGACAATGTTCCTTGGATTCTTCGTGTATAGCTACAACCGAATTCAGCCAAACACATGGAGTGGTGCATATCAGTGCTGGGGGAAGGAGAACAGGGAGGCTCCACTGAGAACTGCATGCCCACCTGGGATACCTCTTGATCTCGTCAGCAACTTCGAAATTAAATCCTTCGATGCGTGCGCAAACCCGCACTTGGGCCTTGCTGCTATAGTTGCTGCTGGGATTGATGGACTCAGGAGAAGCCTTACGTTGCCTGAACCAACTGGTACGAAGTTTCTCATTATTTTTTTCTTTTTTTGTCTCTCTCAGAGAGTTTTAGATTTTCAGTGCAAGTATTTAGCCTGCAAACATGAGGTTTGGAACCTGGAAAAATTCACAACTTCTTTGCTGACCATTGAATACTCGCGAGTGTGCCTTTTCGGGTCTAATAATAGTTTGCTTTTGATTTTCGCCAAGAGGGCGTCTGCAAGTGTATAATGGGTTTTGTGATCTTTTGCAGAATCAAACCCTGCAGGTTATGCCTCCAACTCCAAGCTCAAAAGGATGCCGAAGGACTTGATGGAATCTGTCGAAGCACTAGCTGCAGACAAAATCATGCATGAATTGATCGGCGATAAACTTGTCACTGCCGTTATTGCTGTACGAAAGGTTAGGGAAAAAAATCATCTTTTTTCCGTCTTCTTGACATACTTCGACCAGTTAATAATCTAGGCCCCAATAATCTGCGTTTTTTTCTAAAAAAAAATTGCGCGTTGCAGGCTGAGATTGATCACTACGAGAAGAACCCTGCAGCATTCGCCGATCTCATTCACCGTTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033073