BGIOSGA033085

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Revision as of 05:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033085| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033085, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA033085

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033085, complete gene.

LocusTag

OSJNBA0071K18.10

Ensembl Transcript ID

BGIOSGA033085-TA

Ensembl Protein ID

BGIOSGA033085-PA

Length

4910

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15628978..15633887

Sequence Coding Region

15628978..15629015,15629134..15629158,15629772..15629903,15630207..15630366,15630938..15631113
,15631206..15631301,15631435..15631539,15631622..15631708,15631798..15631887
,15631957..15632037,15632124..15632192,15632337..15632414,15632502..15632597
,15632905..15633004,15633132..15633235,15633320..15633425,15633519..15633597
,15633785..15633887

Genome Context

<gbrowseImage1> name=IndicaChromosome10:15628978..15633887 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:15628978..15633887 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACCGCGCGGCCGCCAGCCTCGCCTCCAAGGCTCGGCAAGCCGGGAGCAGCGCTCGCCAGGTTGGAAGCAGGCTTGCCTTGAGCAGGAACTATGCTGCCAAGGATATCAAGTTTGGAGTTGAGGCCCGTGCTTTGATGCTGAGGGGTGTTGAGGAGTTGGCAGATGCAGTCAAAGTGACAATGGGTCCTAAGGGACGCAATGTGGTTATTGAGCAGAGCTATGGTTCACCGAAAGTCACAAAGGACGGTGTGACTGTTGCCAAGAGCATTGAGTTCAAGGATAGAGTCAAGAATGTTGGTGCAAGCCTTGTAAAGCAGGTTGCTAATGCGACCAATGATACTGCTGGAGATGGTACCACTTGTGCTACTGTATTGACTAAAGCAATATTTACTGAGGGGTGCAAGTCTGTTGCTGCTGGCATGAATGCAATGGATTTAAGGCGTGGAATTTCAATGGCTGTTGATGCTGTTGTAACTAACCTAAAGGGCATGGCTAGAATGATCAGCACATCAGAGGAAATAGCTCAGGTGGGCACAATATCAGCAAATGGGGAAAGGGAAATTGGTGAGCTTATTGCAAAGGCTATGGAGAAGGTTGGCAAGGAGGGTGTAATCACCATTGCGGATGGTAACACCCTTTACAATGAGCTTGAAGTTGTGGAAGGCATGAAACTTGACAGAGGCTACATCTCTCCTTACTTTGTTACCAACCCAAAGACCCAGAAATGTGAACTGGATGACCCCTTGATCCTGATACATGACAAGAAGGTTTCGAACCTGCATGCAGTAGTTAAAGTCTTGGAGTTGGCTCTGAAGAAGCAAAGGCCTCTGCTGATTGTTGCTGAAGATGTAGAGAGCGAGGCATTGGGTACTCTGATTATTAACAAGCTTCGTGCAGGCATCAAGGTCTGTGCTGTTAAAGCTCCTGGGTTTGGGGAGAACAGGAAAGCAAACTTACAGGACCTTGCGATCCTTACTGGAGGAGAAGTCATAACTGAAGAGCTAGGAATGAATCTTGAGAAGTTCGAGCCTCAGATGTTGGGTACATGCAAGAAGGTAACTGTATCTAAGGACGACACTGTTATTCTTGATGGAGCTGGAGACAAGAAATCCATTGAAGAGAGGGCTGAGCAGATTAGATCTGCAATTGAGCTAAGCACTTCTGATTACGACAAGGAAAAGCTACAGGAGCGGTTGGCAAAGCTCTCTGGAGGTGTTGCTGTTCTAAAGATCGGAGGAGCCAGTGAAGCTGAAGTTGGTGAGAAGAAGGATAGAGTGACAGATGCATTGAATGCCACTAAAGCTGCTGTGGAAGAGGGTATTGTACCAGGTGGAGGTGTTGCACTTCTTTATGCATCAAAGGAGCTGGATAAATTGCCGACTGCTAACTTTGATCAAAAGATTGGTGTACAAATCATTCAGAATGCTTTGAAGACACCGGTGCACACTATTGCTTCCAACGCAGGTGTAGAAGGGGCTGTTGTTGTCGGTAAGCTTTTGGAACAAGATAACACCGACCTTGGCTATGATGCGGCTAAAGGTGAATATGTGGACATGGTGAAGGCTGGTATCATTGACCCACTAAAAGTGATCAGAACTGCCTTAGTGGATGCTGCAAGCGTATCATCTCTGATGACAACCACGGAATCCATCATCGTAGAGATCCCAAAGGAAGAGAAGGAGGCGCCAGCGATGGGAGGCATGGGTGGAATGGATTACTAA</cdnaseq>

Protein Sequence

<aaseq>MYRAAASLASKARQAGSSARQVGSRLALSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFVTNPKTQKCELDDPLILIHDKKVSNLHAVVKVLELALKKQRPLLIVAEDVESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLEKFEPQMLGTCKKVTVSKDDTVILDGAGDKKSIEERAEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEKEAPAMGGMGGMDY</aaseq>

Gene Sequence

<dnaseqindica>1..38#157..181#795..926#1230..1389#1961..2136#2229..2324#2458..2562#2645..2731#2821..2910#2980..3060#3147..3215#3360..3437#3525..3620#3928..4027#4155..4258#4343..4448#4542..4620#4808..4910#ATGTACCGCGCGGCCGCCAGCCTCGCCTCCAAGGCTCGGTGAGTGTGCTTGCTTGATTCCCCTCCTCCGCCCGCATTGCGATCTGAGTCTCGCGACGCGCCTGCTGTTCTTTCCGACGTTTGAGCGGTTTGCTGAACTGTTTCGTTGTTGGTGCAGGCAAGCCGGGAGCAGCGCTCGCCAGGTGAGCGGATTCGTGATGGAGTGGGGTTTTGTCTCGCTGGGTTTATTAGTTTGAGTTAGTGTGGGTGTGGGAGTTGGAGTGGGAGGTTGTGCGTCTCGTTCCGGTTTGGTGATGTGTGTGGGGGGTGGGAGATTCGTTTGGGGTTTCTGTGCTGGGCTTCGTGAAATCTCTTTGAATGGCTAGAATCCACTGGATTTACACTTGAAGTTTGATTTAGTCCATTGTGGTGGTCAGGGATCAAGTAGTACCGTTGATTTCAATTGTCGATGTTGTGAAATTGGTTGTTTGCTAGTGTAAAGATCAATGCTTGCTGGCACTCAAGAAAGATCTATGCTTTTTTTTTTCTTTCGAGGTGGCGGCGAAAAGATATATGCTTGTTTCTGTTAGATGTTTTGTCAGTGACGACTGTTGAAGAGTTAGCGACTTGTTTTTGTGTATGTAGTTTAGCTCAGAAGTTGAATTTTGCTCCAATTGAGTAAGTCTGCTTGTGATCCTCAGTTTCTCACTGGTCTGTAATCGTCGTGAGTCGTCGTGAGTTGATGGTGGTCAGAGTTGGTTGTAATCAAATGAACTTTCTTTTTTGCTTTGTTGCCTTATATATGATGATATGTAGGTTGGAAGCAGGCTTGCCTTGAGCAGGAACTATGCTGCCAAGGATATCAAGTTTGGAGTTGAGGCCCGTGCTTTGATGCTGAGGGGTGTTGAGGAGTTGGCAGATGCAGTCAAAGTGACAATGGGTCCTAAGGTATAATTGTGTTCATGTAAATGTGTCATTGTGCACTTGTGTACTTGTCTGAATACGTTAATTGTTTTGTAGCTATTATAAATGAAGTTCCTTTGATAGAAAGCCAAATGATTGGTTTATGATTCTGAAAATAACTGTCATAAACATGGTGCACCTTTTCTCTGATGACAAAATTAGTCTTTATGTCATGCTTTCATTGTTGCAGCACAGTGTTTGTTGGGCCTACAACTTTTTATGTTTTTATTTTGTCAGAGTGCTGTGTTGTGTTATTTGCAGATTGGACTTAACGTGTCTATTATGCAGGGACGCAATGTGGTTATTGAGCAGAGCTATGGTTCACCGAAAGTCACAAAGGACGGTGTGACTGTTGCCAAGAGCATTGAGTTCAAGGATAGAGTCAAGAATGTTGGTGCAAGCCTTGTAAAGCAGGTTGCTAATGCGACCAATGATACTGCTGGAGATGGTATGGCTGTACTTGTACCATTCTGTTGAGAATACTTGGTCCTTCTGTTAGCATTCAACAACTTTGGTTATATTATAAACAATTCCAGACCATCTCATGTTTTGCCTTCCTGTAATATTTAACCTGTAACTTATATTTACAAATATGTTCATTATTTGCATTTTTGCATAAAGTAATTCACTGTATTTAATTTATTGTTGGACGAAGGTTTGAGTGTATGCAGTTCTTATCTTCATTGTATTCATAGGTGTGAGTTTTGGCATTGTAATTTATTGTTGTTTGGGCATTTTCAATCATCTATCAATGCTACCTTGAATTATAATGCTATATAGTACCACTGGTTTTTGATAGATGTCACGGTTGACTTTTTTATACACAATTTGTTTTGTTAAAAAACGAAAATTATTATTCATTTTGTTTGTGACTTGGTTTATCATCAAAGGTAGTATAAGCATGACTTACATTTTCACATATTTGCACAAATTCAATATGTGGATTGCATTGTACTTTAGGATTTGCTTAGTTGCATAATTTGTTTGTTCTAACTGTGTTATTCTGATCCAAAATTCAGGTACCACTTGTGCTACTGTATTGACTAAAGCAATATTTACTGAGGGGTGCAAGTCTGTTGCTGCTGGCATGAATGCAATGGATTTAAGGCGTGGAATTTCAATGGCTGTTGATGCTGTTGTAACTAACCTAAAGGGCATGGCTAGAATGATCAGCACATCAGAGGAAATAGCTCAGGTAATACTTGTGATTCATTGCAGATCTCATTATGTGTTTGACTTGTTTCTTAATCTTAATCTGTTACTAAGTTCTTATGTTCATATATAAAGGTGGGCACAATATCAGCAAATGGGGAAAGGGAAATTGGTGAGCTTATTGCAAAGGCTATGGAGAAGGTTGGCAAGGAGGGTGTAATCACCATTGCGGTAAGTTGATCCAAGTTAAAACTGAACTTGGCCTCTCTTATCTCTATTTGGTTGGTAGACTTACTTTAGTTAAAACTGAACTTGTGCCAACACTCTGGTTTTTCGTTAATTTGTTTGCTTAAACATTTGGTAGGATGGTAACACCCTTTACAATGAGCTTGAAGTTGTGGAAGGCATGAAACTTGACAGAGGCTACATCTCTCCTTACTTTGTTACCAACCCAAAGACCCAGAAATGTGTAAGTTTTTAACTTCTGTTGTTGGTTGATATGTTCAGTTTTTCTTTTGGAACTATCTCAGTCATGAGGTTATATTTAACAGGAACTGGATGACCCCTTGATCCTGATACATGACAAGAAGGTTTCGAACCTGCATGCAGTAGTTAAAGTCTTGGAGTTGGCTCTGAAGGTATGTGTTTGCTTTCATAAAATAGTTGTATATTGTGGTGGTGCTACTGATTTTCTTGCTATAACTGGTCAACATCTTGCCTTGCACAGAAGCAAAGGCCTCTGCTGATTGTTGCTGAAGATGTAGAGAGCGAGGCATTGGGTACTCTGATTATTAACAAGCTTCGTGCAGGCATCAAGGTCAGTAAATACTGGGCATTTGTGATTTGAATCTGTGTAGTTGTCCTAAATGAGGGATGTGTTGTTCAGGTCTGTGCTGTTAAAGCTCCTGGGTTTGGGGAGAACAGGAAAGCAAACTTACAGGACCTTGCGATCCTTACTGGAGGAGAAGTAAGTTTAACAATCACCTCTCCAAGTTGGTGCATATAAAATTAACCAATTGAATGCATTATAACCTGTTTATTTTAATGATTCAGGTCATAACTGAAGAGCTAGGAATGAATCTTGAGAAGTTCGAGCCTCAGATGTTGGGTACATGCAAGAAGGTATGAATGATTCCTAGAAGGCTGGTAGATAAGCTTTGGCTATCTTTGGAAAGAAATTTGTTTGAAGTGTATCTTTTGTCCGCTAACATTTAAGATGATACCAGTCTGTTCTGATGGTTGAGTGATATTCCATGTCCATTACAGGTAACTGTATCTAAGGACGACACTGTTATTCTTGATGGAGCTGGAGACAAGAAATCCATTGAAGAGAGGGCTGAGCAGGTTCGTACAACATTAATTCATTGCGTTACTAGTGCATTATTTTGAAAATCGTGGTTGTTGATAGATTATATAAATGCTGTGTTGCAGATTAGATCTGCAATTGAGCTAAGCACTTCTGATTACGACAAGGAAAAGCTACAGGAGCGGTTGGCAAAGCTCTCTGGAGGTGTTGCTGTTCTAAAGGTGAGGTTCACAATATTATGTTTATATTGAGGAATATATATTGAATGAAATAACAAACTTTCCGAACATTCCATGGTTAGATAAACCATCTGAAAGAGCCAATGTTAGACAGAATACCAGATATGTTACTGTGTAGCCACCTAGTGTTGATTCTATTATATTGATGGTAAAAGCTTGTGAAGTCTCATTAGAGACCTCACACTTGTAACACACAATGATGTTGAGAATGGAAGTTGAATTGCACTGCTAGGAGTGGTGCCCTGAAGTTATATTTTGACCTGTATATGCATCATGACCTTTCCTACAGATCGGAGGAGCCAGTGAAGCTGAAGTTGGTGAGAAGAAGGATAGAGTGACAGATGCATTGAATGCCACTAAAGCTGCTGTGGAAGAGGGTATTGTACCAGGTATGCAGTTGCTCCACTTCAGTAGATTTCTTTCAATATGTTTTCCTTGTAATGTACTTGTTCAGTTTGCATCTTTGCATTATTATGCCCAAGTATGCTGACATGACATCTTTGCATTACAATACAGGTGGAGGTGTTGCACTTCTTTATGCATCAAAGGAGCTGGATAAATTGCCGACTGCTAACTTTGATCAAAAGATTGGTGTACAAATCATTCAGAATGCTTTGAAGGTTTGGGAGGGATAATAACTTCTCATTTCCTGTTTTGCTGATTTCTTCTCTGGGAGCAAAACCTGATGACAACTTATTTTGCAGACACCGGTGCACACTATTGCTTCCAACGCAGGTGTAGAAGGGGCTGTTGTTGTCGGTAAGCTTTTGGAACAAGATAACACCGACCTTGGCTATGATGCGGCTAAAGGTATGATTGAACCTTTCCTCATTGAATATCGTAATATCCCATGATTGTCGTCTGTAGTTTGTTGCTGATCCGTGTGCGATATACCTTATGTAGGTGAATATGTGGACATGGTGAAGGCTGGTATCATTGACCCACTAAAAGTGATCAGAACTGCCTTAGTGGATGCTGCAAGGTAAGCTCTCAAGTTCATGGTTCTGTGCTTTAGTTCTTTACATTAAATTGTTGATCAAACATGGGTGATACACTGAAGCACCCACCTCATCCCTTGTGCTTATTTCGGTTTTTGATCTGAAATTTTTCACCCATTTAACGTTACTTTTGGCTCTTGCGGGTTCTTACAAGTTGTTTGCCTTCTGCAGCGTATCATCTCTGATGACAACCACGGAATCCATCATCGTAGAGATCCCAAAGGAAGAGAAGGAGGCGCCAGCGATGGGAGGCATGGGTGGAATGGATTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033085