BGIOSGA033117

From RiceWiki
Revision as of 05:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033117| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033117, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033117

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033117, complete gene.

LocusTag

OS10G0472400

Ensembl Transcript ID

BGIOSGA033117-TA

Ensembl Protein ID

BGIOSGA033117-PA

Length

2076

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16309235..16311310

Sequence Coding Region

16309235..16309243,16309357..16309454,16310409..16310725,16310859..16311310

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16309235..16311310 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16309235..16311310 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGATGATGGCTATCCGGTCAAGCTGCATATATACGATCTTAGCCAGGGGATGGCGCGGCAATTGTCAACAACAATCCTTGGCAAGGCTATTGAGGCAATTTGGCATACAGGGGTGGTAGTCTACGGGAAGGAGTACTTCTTTGGCGGCGGCATTCAGAAGGATCATCCCGGAAGAACACCGTACGGGACCCCGGTCAGGGTGGAAGATCTTGGGGTCACCCATGTCCCCAGGGAGATCTTTGAGGACTTCCTTCAGGATATCAGCCCAAGGTACACTCCTGCAACCTACAACCTCCTCAGCAACAACTGCAACAACTTCACCAATGAAGCCGCGCAATTCCTCGTCGGTTCCGCCATCCCGAGCTACATCCTGGAGCTGCCCAATGAGGTGATGAACAGCCCGTTCGGCGCGCTCATATTGCCGATGATTCAGGGGTTGGAGACAAGCTTGCGAGCTGGAGTTGCTCCTCAGCCGCCGCAATTCAAGCCTTCTCCGGTGGCGGCAGTGACGGCGACGCAGTCACCACCATCGGGTAGCATCCATGTCGAGCCGAAATCGACCGCCTCCGACAAGACGGAGGTTGACAACAACGGCGGCGGGATTCCGCCGGCGGTACAACCTGCTCCGGTGGCGGCGGAGACGTCACCAGCAGCAGTAGCCGAGGCGAACATGGCGCCGCCGCCTCCGGTGGATCCGCTCCGGGAGGCGAAGAGCCGGGTGCAGGAGGAGATAAAGAGGGAGTTCGCGGCGATCATGGCGACGGGCGCCGTACAGGCCGGCGAGGCGGCGGCGCTCGCGACGAGGAGGGTCATGGAGCGGCACGGGCTGCGTCGCGCCGCCGTCGCCGGCGGCGGCATGCAGCGAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MADDGYPVKLHIYDLSQGMARQLSTTILGKAIEAIWHTGVVVYGKEYFFGGGIQKDHPGRTPYGTPVRVEDLGVTHVPREIFEDFLQDISPRYTPATYNLLSNNCNNFTNEAAQFLVGSAIPSYILELPNEVMNSPFGALILPMIQGLETSLRAGVAPQPPQFKPSPVAAVTATQSPPSGSIHVEPKSTASDKTEVDNNGGGIPPAVQPAPVAAETSPAAVAEANMAPPPPVDPLREAKSRVQEEIKREFAAIMATGAVQAGEAAALATRRVMERHGLRRAAVAGGGMQRG</aaseq>

Gene Sequence

<dnaseqindica>1..9#123..220#1175..1491#1625..2076#ATGGCAGATGTAAGGATTGTTTCCATCTGTGTTTCATTATGAATCCAGTGAATTGTGCTGCTGTTTTGCTTTACATTGGAGCATTGCAATGGAGATGAGATGGTTGGGGTGTTCTTGTGTAGGATGGCTATCCGGTCAAGCTGCATATATACGATCTTAGCCAGGGGATGGCGCGGCAATTGTCAACAACAATCCTTGGCAAGGCTATTGAGGCAATTTGGTGAGTATCGCTAAATATTTTGGGCATTTGATACTGTATTTTTCTAGAAAAACATAATCTTAGTACTTTCTCCGTTTCATAATCTAAGTCATTCTAGCATTGCCCATATTCATATGGATGTTAATGAATCTAGATATGTATATGTCTAGATTCATTAATATCCATATGAATTGTGGACAATGCTAAAATGACTTACATTATGAAACGGAGGGAGTAGTACATTTTCCTTTTCCTCCTGGTAATGAGATTGGTTACAGTAGGATAATTAGAATATCTGTTTAAGCCATGCATTCATGTCTGTCACCGTATGAACCTTAACTCTAGTTTTAGTTGTGTCTCTAGGGACCCCAAATTCACCATGCTACATATGTTGTTATGGCCTTGTGAACGTTTTTCTTGCTTGCTTATGAGTAGTCTAGATATCTGCTATTATGTGCAAGAATATGCAAATGAGCTCTGTTGTCCATCCTTGTGCATCCTATGACCACATTATGGTGTTCTTTTAGACATGACCAAAGGTTGCAAATGACTTGAGCAAAGCTCTAAATTTCTGATTATATATACTAGCAATCATGAGTCATGACTCTATTTGGAAAAGTCTTTCACTTCTACTGATTTAAGTAACAAAATACCCCTACCTTTCTTCTCGTTGAATTGCTGAAATTAGGTAGCATCATTGCTTCATACCTATTTGGGAAGGAAATAGTTTTGCTATATTGCCAGTATTATTGGTATGTTCTTATAGCAGTTTGGTACCAACAGCAATGCATAGGAAAAAAAAAGTACATTTATTTCACTTAAACATCATAAGAGGCATCTTTAAGTTCGTCTTTGTTTCATTCTTCAACATCTTGTAGTTTCAGATGATGCGAAAACTGCTTTTGTCGACGCTCTTGAATTATATTCTCCTGCAAAATTTTCTTCTGAAACAGAGATGGCCTCCGATCATCGCAGGCATACAGGGGTGGTAGTCTACGGGAAGGAGTACTTCTTTGGCGGCGGCATTCAGAAGGATCATCCCGGAAGAACACCGTACGGGACCCCGGTCAGGGTGGAAGATCTTGGGGTCACCCATGTCCCCAGGGAGATCTTTGAGGACTTCCTTCAGGATATCAGCCCAAGGTACACTCCTGCAACCTACAACCTCCTCAGCAACAACTGCAACAACTTCACCAATGAAGCCGCGCAATTCCTCGTCGGTTCCGCCATCCCGAGCTACATCCTGGAGCTGCCCAATGAGGTGATGAACAGCCCGTTCGGCGCGCTCATATGTAAGAATCCCCAATTCTATTAGATCTCATTGTGCCTTGTCCAGTTAAAAATTGAGTGAACATTTTGAACTTAGCAGCAAAATTGCGCGTATTCTGAATTATGAAAACTTGATATTATGTTTTGGGTTTTCAGTGCCGATGATTCAGGGGTTGGAGACAAGCTTGCGAGCTGGAGTTGCTCCTCAGCCGCCGCAATTCAAGCCTTCTCCGGTGGCGGCAGTGACGGCGACGCAGTCACCACCATCGGGTAGCATCCATGTCGAGCCGAAATCGACCGCCTCCGACAAGACGGAGGTTGACAACAACGGCGGCGGGATTCCGCCGGCGGTACAACCTGCTCCGGTGGCGGCGGAGACGTCACCAGCAGCAGTAGCCGAGGCGAACATGGCGCCGCCGCCTCCGGTGGATCCGCTCCGGGAGGCGAAGAGCCGGGTGCAGGAGGAGATAAAGAGGGAGTTCGCGGCGATCATGGCGACGGGCGCCGTACAGGCCGGCGAGGCGGCGGCGCTCGCGACGAGGAGGGTCATGGAGCGGCACGGGCTGCGTCGCGCCGCCGTCGCCGGCGGCGGCATGCAGCGAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033117