BGIOSGA033120

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Revision as of 05:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033120| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033120, complete gene.| tag = OsI_340...")
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Gene Name

BGIOSGA033120

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033120, complete gene.

LocusTag

OsI_34011

Ensembl Transcript ID

BGIOSGA033120-TA

Ensembl Protein ID

BGIOSGA033120-PA

Length

5060

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16421108..16426167

Sequence Coding Region

16421108..16421166,16421503..16421651,16421749..16421970,16422052..16422188,16422320..16422571
,16423923..16424071,16424867..16424946,16425022..16425152,16425226..16425513
,16425677..16425819,16425906..16426167

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16421108..16426167 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16421108..16426167 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAGAAAGCCCAGGTGGCCAGGGAAGAACAAGGAGGCAGATGCACGAGTCCGATTGACTGCAAAGACCCTGAGAAACAGGGGGCAGATTGACTGCACCAGGGGTGTGAGTAGGGAGCAAAGAGCCATAAATAGAAGGAAAAAACTTGAGTCGAGTTCTGGTTATGTCAAGTCCCGCAAGAGGCTCCTAAAAGTTTACGTTGAATATCAAAAGAGACTGAAGGCATTGGATGCTTTTGAAAAAAATCAATGTGCTATTGAGGAGGAACGATTTGGTGAAGGTCTTTGTGATCGAGAAGTTTCGACCATTGCTTTTGAAGAGGAATCATTTGGCCATATTGTCGAACCCAGCCAACAAACTTATCGAACCAGTGCTAGTGATGATCTTGATTTGTCTGACATTGTCGTCTCCCTTGCTTTGTTTGATGGAGATAAGATGTTATTTGCATTCTCGGGCATACCTCTACCATCCAGAAGATCTAGAGAAGAACTAACAAGTTTTGTGACATCAGCTGATTTGGCTAGAGCATTTAATGAGCATAGAAATAGGGATGATAATTTGACGGTTGCAGTGCGCCTTCCTGATAATACAACTACTGATGGGTTCTTAGGACTATATGATCATGATATTGTTATTGTCACATGCTTGGGTCTCGAAGAGGTCAGTCCTATAGATTTTAATGGAACACCTGCCTGTCCTGATGGTAGTCCTCTTCTAGCTGCTGGGCGTGCCTTCAAGTCAGGCAATTTAATGGCCATGAGTGGGTCTGTTCATAGTGGCAACACCTGGGTTCCTGATAGTCAAGATATCTCTAAGGCTGTACTTGGAGGGCCACTTCTTGGAAAGGATAACATATTTCTTGGGATGAACTTTAGTATTTATGATGATGATGATCGGACTGTGAAATATGCTTTCCTACCAATGGAATTACTTCATGAGCGCTTGAAGCATTTTGGGATACTCGAGGAGCGTGTCTGGAAGCATCTTCGGAAAGAAGTTGTGACAGACATATCTCGTCGTGTTGTCTCACTTGCATCATTCAATGGTCTTGTGAGATCATTTGCATGCACAGGTTTGATTATAAATTGGCATGGAAGCAAAGCTTTGCGCCCTGTCATCCTGACTTCAGCTAGTTTGATCAGTCATAATGAAGACAAGATTGATAGTAACCTGAAGATTGAGGTTTTTCTCCCACCGAATCAACGTGGTAGTGGGATATTGGAATTCTATAGTCTAAACTATAATATTGCTATTGTCAGTCTCAAGCGGAATTTCAATACTGTTCGCCCAGAAAACATTTTCAGTGGAACAGTGGAAATGTCATCTGAAAAAGTAGTAGCTACAGGACGAGACGTTACTCTTGGACCATTGATGGCCACAATTGGTAAAGTGATTCAGCATGGTAAAAACAATTGCAAACTTGATTGCAAAGATCTTAAGGTTTCCACATGTAAAATCACAAAGGCTGGGATCGAAGGCCCTCTTATTAAGTTTGATGGGAGTTTTGTTGGCATGAACTTTTATGATGGAAGTAGAGTAACTCCTTTCCTACCAAAGGATAAGATTGTTAAAGTTTTAAGCACAGTGATTGATTTACCATCGGAAAGTGGGCATAACCATCCTATGCCCATAGATGTTGACGATGGCACAAAGAAAAATGGGTATTCATTTATTCTTTTTGTTTCTTCGTTGCCACTTGTTTCTGGCAGCTTAGATTATTATATTCAACAATCAACTTATATGGGAAATATTATATTGGATGGCAGGTGGCCTGTGCCAGAGCCATACTGGTATCATGGCTCCCTTGATGTTGATATGCATTATATACCCAAGCTTATTGGAAGGGTTTCTCTAGTAGACTCATGCTAG</cdnaseq>

Protein Sequence

<aaseq>MDRKPRWPGKNKEADARVRLTAKTLRNRGQIDCTRGVSREQRAINRRKKLESSSGYVKSRKRLLKVYVEYQKRLKALDAFEKNQCAIEEERFGEGLCDREVSTIAFEEESFGHIVEPSQQTYRTSASDDLDLSDIVVSLALFDGDKMLFAFSGIPLPSRRSREELTSFVTSADLARAFNEHRNRDDNLTVAVRLPDNTTTDGFLGLYDHDIVIVTCLGLEEVSPIDFNGTPACPDGSPLLAAGRAFKSGNLMAMSGSVHSGNTWVPDSQDISKAVLGGPLLGKDNIFLGMNFSIYDDDDRTVKYAFLPMELLHERLKHFGILEERVWKHLRKEVVTDISRRVVSLASFNGLVRSFACTGLIINWHGSKALRPVILTSASLISHNEDKIDSNLKIEVFLPPNQRGSGILEFYSLNYNIAIVSLKRNFNTVRPENIFSGTVEMSSEKVVATGRDVTLGPLMATIGKVIQHGKNNCKLDCKDLKVSTCKITKAGIEGPLIKFDGSFVGMNFYDGSRVTPFLPKDKIVKVLSTVIDLPSESGHNHPMPIDVDDGTKKNGYSFILFVSSLPLVSGSLDYYIQQSTYMGNIILDGRWPVPEPYWYHGSLDVDMHYIPKLIGRVSLVDSC</aaseq>

Gene Sequence

<dnaseqindica>1..59#396..544#642..863#945..1081#1213..1464#2816..2964#3760..3839#3915..4045#4119..4406#4570..4712#4799..5060#ATGGACAGAAAGCCCAGGTGGCCAGGGAAGAACAAGGAGGCAGATGCACGAGTCCGATTGTATATTCGTATGCACGTCACCGTCCGCTTGCTCCTCGCATGATTGCACGAGTCCGACTCGATGACAAGGCGACGTACTGCCCGATAAAAACATCTTCATTTTTTAAATATTTTTTAAATAGTAGAGATAGAGATCTATACCCAAATAATCAAATCAATTTGGTATTGATTTTGAGCACATGCTGCTTCATAGTGTTACGATTACTAGCATTATCAGTGAACCCGAAAATAAATGGTTACAAGGTAGTAAGGTGCTCTATTGTTTTAGTTTTCCAATTGGTGTTGCTACATTATGATCAAACCTTGACCAACCATTTGCATTACTTTCTTCTTCAGGACTGCAAAGACCCTGAGAAACAGGGGGCAGATTGACTGCACCAGGGGTGTGAGTAGGGAGCAAAGAGCCATAAATAGAAGGAAAAAACTTGAGTCGAGTTCTGGTTATGTCAAGTCCCGCAAGAGGCTCCTAAAAGTTTACGTTGAATGTGAGTAATTGATTTGAATTTTCAGGTTCTTCTTTTTCTGTTACATATTGCTCTAATAAAATACTCATAGTTGTGATGTATCATTTTCGTTAATCAGATCAAAAGAGACTGAAGGCATTGGATGCTTTTGAAAAAAATCAATGTGCTATTGAGGAGGAACGATTTGGTGAAGGTCTTTGTGATCGAGAAGTTTCGACCATTGCTTTTGAAGAGGAATCATTTGGCCATATTGTCGAACCCAGCCAACAAACTTATCGAACCAGTGCTAGTGATGATCTTGATTTGTCTGACATTGTCGTCTCCCTTGCTTTGTTTGATGGTGGATGCACTACAATGCTTATGAATTTTCCTTATTTGTGTTTAGTTGTCACTTAATTATTTAAATCGTGATCTTGTCCAGGAGATAAGATGTTATTTGCATTCTCGGGCATACCTCTACCATCCAGAAGATCTAGAGAAGAACTAACAAGTTTTGTGACATCAGCTGATTTGGCTAGAGCATTTAATGAGCATAGAAATAGGGATGATAATTTGACGGTTGGTGCTGCAAATCATTGTGCCATTCGTTTTGCTTGTTTATTTGGGCTTTACTACGTCCACCATTTCACTTTATTTATCCAGATGAATTGTGGCTATTGTACGATGATGTACTGCTTTTATCACTATAGGTTGCAGTGCGCCTTCCTGATAATACAACTACTGATGGGTTCTTAGGACTATATGATCATGATATTGTTATTGTCACATGCTTGGGTCTCGAAGAGGTCAGTCCTATAGATTTTAATGGAACACCTGCCTGTCCTGATGGTAGTCCTCTTCTAGCTGCTGGGCGTGCCTTCAAGTCAGGCAATTTAATGGCCATGAGTGGGTCTGTTCATAGTGGCAACACCTGGGTTCCTGATAGTCAAGATATCTCTAAGGTATGCTTTGATCTGTTTTCTACTTTTTGCATTGATGGAAAACTTGAATTAGATAATTGTATGATGATATCGGTGATCTTATAAGCCTTAAGGCACCACTGTTTGCTGCAAAGTAATATATATATAGTGTGGATAGACATATACAGATGTCTAAGAAAATCAGCCACACGATAGCAGTGGAAAAGATTTGAGTAGTTTAGAATCAAACTGCAAATATGAAACTATTACAAACATGAAGCAAGTAAAAGCGGGATGTTGGCACTCTGAAACTGCAAACCTGAAACGCTTCTATTATGTGCTTGTTGACTGCAAACCTGAAACGGTGGAGATCGACCGAGAGGCGACGTTGCCGGTGGAGACAAGCGGATTCAGACACGGCATCGATTGTTGGCTGCTGTCGTGCATGTATTTCACCTAGGATGGCAACAAAATCATGACAACAATTCCAGCAGAACAAAATAACGACAATAAAAATTATTTGGGATGGACGCTCTCAGCCGGCGCCCGGAGGATGTGCAGACGCGATGCCGAAGGTCTGACGCTCTAGGGCGGAGCTCGTGGAGACTAGATCTTGGGGCGTCGTCGAGCCTGAAGCCTGACGGGCTGAGTAGTGGCGTCAAGACGGGGCCGCGGGGAGGGGTGGGGGGGGGGAGCCGAGGGGCGCGGAGGTAGCAGTGAGACTGGACTGGAGGCGGACGGCCACGACCCCGACGACGACCCTGGGCGGCGCACCACGAACAAAGGTTGAGAGAGCGCGGGACTAAGGTCGGCCGGCCGGCAACGATGGAGCTCCATGGGGATCTTGAGCCGCCAAGCCACAGTGTGCATGCCTTCACCGGAGCAAGACCCGCGTGGGAGGGAGGGGACGTCGGATCCGCCATCGCGCCGCCTTCAGCCGTGCCGGATCCGCCTCGCTGCGACCAGATCCGCCGCCGCCTCGCCGAGCCTCCAGTCACCCACCACCACCGCACCCGCCCCCGTTCAGCGGTGGAGGAGGTGGAGCCGCCGCACCTCCCGCCCGCCGACGCCGCGCCCGCAGTCGCTTGTCGCCCCGAACCGCTATCGCCGCCGCTCCGCCGCATGAGAAACTGCATGCCTCTGCCGGATCCGTAAAAAGTGGAGAGGGAGGGAAAAATGGGTGGACGGTTTCTACGATGGAAGAATAGCATGTAGATTCAATAGTAAGCAATTTACTCCATAAAAGTAGGAGGGGGAGGGGGCGCAGGTGGGCTGGGGTGCACGGGAGTGGGGGTGGGGGTGGGTAGGATGTGATGGGGAGCGTTGTGCGGTATAGTATGTGTGTGTATGTAATTTTTCTTTATAAATAAATCCTACCACTTTGATTTGTTAGGCTGTACTTGGAGGGCCACTTCTTGGAAAGGATAACATATTTCTTGGGATGAACTTTAGTATTTATGATGATGATGATCGGACTGTGAAATATGCTTTCCTACCAATGGAATTACTTCATGAGCGCTTGAAGCATTTTGGGATACTCGAGTATGTCTTCTACGCATCCTGTATTTGAGTTTTTTTCTTCCCCACTTAGCTTATTCTAAGTTGTTCCAAACCTATCTCTTATTCCCCTTCCTCATTTAATAAGGTAAGCCATTTTTTATACTAACAGCATTAGGACCTTGGGAGTTTTCACACAATAATCTTTTGATACTAGCTGCATAAGAGTAATCTGGATAGTGCAATATGGATAGTGCAACTTATATTTGTGACATTTGAATATTCTCAGTCCTCTCATGTGTTATATTGAATATTTAATATTCTGATTTTCTAGTCCTTTATTCATACCTTGGTTCCTTTCATACAATTCGGTTCATGTGTTGGTATGTCTGTTTTTGCTGTTGGGCTAGTTCCTGTACTTTTGTTTATTTTTATAACAAGTCTACTTTGTTTGCAGTCCTAAACGTCTCCACTTCCGGGGATATTCATTGCCTAAAGGTGTAAAAAGCATAGTACCTTCAAGTGTGAATAATAATGCTACCTATGTTCATTACTATGTTAATGTTATCGTACATATGATTTGAGTACTAATAATGATCTCCTAATTGCATCAGGGTTTATGAAAACTATTTACCGGTTAAAATCCTTTGGCTATCCCATGCCGCCACCACTTGTGCTTGAACATAAGTCGTTGCTTTTGATATTACTTTCAACTCCCTTGTGCACTTTATAATTAATTTTTTATCTTGTTTCTTTAACCAGTCAATGGGGAATTGCTTAATCAATTTGAAGATTGCTTCGGTGAGAGTACCCTTACGTTGATCCGGCCATTGGTTGCAGGGAGCGTGTCTGGAAGCATCTTCGGAAAGAAGTTGTGACAGACATATCTCGTCGTGTTGTCTCACTTGCATCATTCAATGGTAATTTTTACAATGATCATTACTTCCGTGCAATTTTTATATTCACTAACTAATGATTAAAGTTGTAATGTATAGGTCTTGTGAGATCATTTGCATGCACAGGTTTGATTATAAATTGGCATGGAAGCAAAGCTTTGCGCCCTGTCATCCTGACTTCAGCTAGTTTGATCAGTCATAATGAAGACAAGATTGATAGTAACCTGAAGGTTGGATCTCATAATCATTTATCTTGATCTTTACATTATATGATGACTTGCTGAACTCACTTTATCTTTGCAGATTGAGGTTTTTCTCCCACCGAATCAACGTGGTAGTGGGATATTGGAATTCTATAGTCTAAACTATAATATTGCTATTGTCAGTCTCAAGCGGAATTTCAATACTGTTCGCCCAGAAAACATTTTCAGTGGAACAGTGGAAATGTCATCTGAAAAAGTAGTAGCTACAGGACGAGACGTTACTCTTGGACCATTGATGGCCACAATTGGTAAAGTGATTCAGCATGGTAAAAACAATTGCAAACTTGATTGCAAAGATCTTAAGGTTTCCACATGTAAAATCACAAAGGTACCGTGGTGAATTTCTCTTGCTGTTTTATTACATGGTAACCCATATAGATAGTTTGCATTGGAATTTGAGTTATCTCTGTAATCACATGACACATCCGCTGAAATCTCAGGATTCACAACTTATACAGTAACATGGGTCTTTTATTTTTATTTTGTACTAGGCTGGGATCGAAGGCCCTCTTATTAAGTTTGATGGGAGTTTTGTTGGCATGAACTTTTATGATGGAAGTAGAGTAACTCCTTTCCTACCAAAGGATAAGATTGTTAAAGTTTTAAGCACAGTGATTGATTTACCATCGGAAAGGTACTTTTTCAGTTATATCTCAATGATAGCTGGTAGGGATAATGCTTATTTATGAACTTACATTGTATAAAAATATTTGATGACAGTGGGCATAACCATCCTATGCCCATAGATGTTGACGATGGCACAAAGAAAAATGGGTATTCATTTATTCTTTTTGTTTCTTCGTTGCCACTTGTTTCTGGCAGCTTAGATTATTATATTCAACAATCAACTTATATGGGAAATATTATATTGGATGGCAGGTGGCCTGTGCCAGAGCCATACTGGTATCATGGCTCCCTTGATGTTGATATGCATTATATACCCAAGCTTATTGGAAGGGTTTCTCTAGTAGACTCATGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033120

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033120&oldid=32342"