BGIOSGA033174

From RiceWiki
Revision as of 05:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033174| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033174, complete gene.| tag = OsI_341...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033174

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033174, complete gene.

LocusTag

OsI_34113

Ensembl Transcript ID

BGIOSGA033174-TA

Ensembl Protein ID

BGIOSGA033174-PA

Length

3989

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17429855..17433843

Sequence Coding Region

17429855..17430043,17430536..17430595,17430845..17430910,17431042..17431110,17431537..17431572
,17431867..17431932,17432161..17432229,17432329..17432406,17432510..17432588
,17432785..17432879,17433037..17433121,17433291..17433484,17433590..17433708
,17433801..17433843

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17429855..17433843 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17429855..17433843 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCGCCGGCGGCGCGGATGGCGGCAACGGCCACCTGCCGCGGCCGCGGAGGGCGCGGCGCGGCGGCGGAGGCGGAGGAGGAATGGGGTCTCCTCCTCTGGGGCCGCCGCCGCCGCCCTGCACCGACTACGACATGGCCTACTTCAAGGCGTACTCCCACATCGGCGTCCACGAGGAGATGCTCAAGATAGTAAACGAAAACTGTGACCGTAAACGTGGATGGATGTGTCCCCTGTTCCTTGTCAAGGACCATGTGAGAACTAATACTTACAGAAATGCTATCATGCATCACCAGGATTTAATTTCAGGCAAAGTTGTGTTGGATGTGGGCTGTGGCACTGGTGTACTTTCTATATTTTGTGCTTTCGCTGGTGCCGCTCGGGTCTATGCAGTTGATGCAAGTGATATTGCCTTACAGGCTATGGAAATTGTGAGAGAAAATGAGTTATCTGACAAAGTCATTGTTCTGCACGGTCGAATTGAGGATGTCGAAATTGAAGAAAAAGTCGATGTCATCATATCTGAATGGATGGGCTACATGCTTCTGTATGAGAGTATGCTGGGGAGTGTAATCTTTGCTAGAGATAAATGGCTTAAACCAGGGGGTCTTATTCTTCCATCGCATGCATCGCTTTACCTGGCACCTATTACAAATTCCCACAGATATCAGGATAGTGTTTACTTCTGGCAAGACGTGTATGGTATAAAAATGTCTTCTATGATGCCTCTTGCAAAACAATGTGCATTCATGGAGCCATCTGTTGAGACGATTAGTGGAGAGAATGTTCTGACCTGGCCATCAGTGGTGGCGCAGGTGGATTGTTATACCATACAAGCTCCAGAGCTTGAAACTATCACTGCTACATTTAACTATACGTCGATGTTGCAAGCTCCATTGCATGGTTTTGCATTTTGGTTCGATGTCGAGTTTAATGGACCAGTGCGCCAGAGATCCAAGAAGCAAGCAAACCAATGCTTGGATGGGAACACACAAGATGCCAGCCCAAGTAATAAAAAGAAAAAGGCAGATGCCCCAATTGTTCTGTCGACTGCACCGGAGGATGCACCTACCCACTGGCAGCAGACCCTATTGTACTTGTTTGAACCTATCGAGCTAAAGAAAGATCAAAATATTGAGGGTTCTGTTACCATATCTCAAAGCCAGCAACATGCTCGCTTCCTCAACATCTGCCTGAAATATTTTACTAGAGATCAATGGTATGTTAAAGAATCGGTGATGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MFAGGADGGNGHLPRPRRARRGGGGGGGMGSPPLGPPPPPCTDYDMAYFKAYSHIGVHEEMLKIVNENCDRKRGWMCPLFLVKDHVRTNTYRNAIMHHQDLISGKVVLDVGCGTGVLSIFCAFAGAARVYAVDASDIALQAMEIVRENELSDKVIVLHGRIEDVEIEEKVDVIISEWMGYMLLYESMLGSVIFARDKWLKPGGLILPSHASLYLAPITNSHRYQDSVYFWQDVYGIKMSSMMPLAKQCAFMEPSVETISGENVLTWPSVVAQVDCYTIQAPELETITATFNYTSMLQAPLHGFAFWFDVEFNGPVRQRSKKQANQCLDGNTQDASPSNKKKKADAPIVLSTAPEDAPTHWQQTLLYLFEPIELKKDQNIEGSVTISQSQQHARFLNICLKYFTRDQWYVKESVMK</aaseq>

Gene Sequence

<dnaseqindica>1..189#682..741#991..1056#1188..1256#1683..1718#2013..2078#2307..2375#2475..2552#2656..2734#2931..3025#3183..3267#3437..3630#3736..3854#3947..3989#ATGTTCGCCGGCGGCGCGGATGGCGGCAACGGCCACCTGCCGCGGCCGCGGAGGGCGCGGCGCGGCGGCGGAGGCGGAGGAGGAATGGGGTCTCCTCCTCTGGGGCCGCCGCCGCCGCCCTGCACCGACTACGACATGGCCTACTTCAAGGCGTACTCCCACATCGGCGTCCACGAGGAGATGCTCAAGGTAAGTCGCCCTACCTGTGCATCTCTCTCTCTCTCACTCTCCGTGGTTTCGGGTTCGTGCTGGAGAGGAGAGTTGGGGGGAACCGCGCGTACCGGCGGATGGATGCGTAGGTGGGTTAGGGTTTATATTTCAGTGGCGATTTTGGGGATCGGATTCGTGGGATCATGGTACAAAATGGGGTTGTCTTGGGATCCTCGTTGTTGCGCTGCTATGTGTAAGGAGAAGCTAGTGTTTGCATTAGTCTAATTAGCATAAAAACCTGCATAGATGGGGATGTTTTAGTCTCGAATGCTATGACAGAGATCATGCTATTCGATGAAAAAATTGAGTAAGCTCCATTTCCATGCCCGCGATCATATGCATTTGGGATTGAATGTATGTAACAAGTTCGCTTACCTTGTCAAGGAACAATGGCCACTCTTTGGGTAACAGTATTTAAACATATACCACAAAGGGAATAATGGGATGATCCTATGTACTTTCATTTGTCAGATAGTAAACGAAAACTGTGACCGTAAACGTGGATGGATGTGTCCCCTGTTCCTTGTCAAGGTACTATCACTGAGACACCAACTGTTTCCAAAACGGTTATGTTAAGGTGCTAGTATATTGTTTCCCACAAACCTTGAAGTTTGAAAATCCTGATATTCTCTTCCCTTTCTTTGAAACCTTTTGTTTAATGAGACCTCTTTGCGCATGAGAAAGTCATTTCTTGTTTATGGGTGTTTCTCCCCCATCCCTCTTTATTTTTTTAAATAAAGAGAAGGGTCATGTGACTGACATTTATGCTGCTGACTGCAGGACCATGTGAGAACTAATACTTACAGAAATGCTATCATGCATCACCAGGATTTAATTTCAGGCAAAGTAATAATATTTTTTGACTTATTTATTTTCTGGACTACATGGTATTCTTGGCAAGACGGCAGATTGGATACAACTTTCTGTCCTACTAATTTAGCTCTTGTGTTTTTTTTTTCTGAAATGGCAACTTTCAGGTTGTGTTGGATGTGGGCTGTGGCACTGGTGTACTTTCTATATTTTGTGCTTTCGCTGGTGCCGCTCGGGTAACTTCATTAGTTAGTTATTAGCTGTGCACTTGTGTTCTGATGATGATACTACAATTTGACGTTGTGCTGATTTTTTTTTAAGTATCTCTCATCCTCTAACATTCCTTTTGCTCTCGAACTATTCTGAAAATTGCAATGGCATATCTTGATGGTTACCAAATACTAGTTAAATCCACGTTTAATCTTTTCTATGCATCAAATTATGATTCATAATTCAGCAGTTTACCTTTTTAAAAGACATGTGAGTGAGCATGTAATATGCTGTACGAATCTATGAGTTCCTTTTGTACATGCTTGAGGGCTGTAGATTATTCTTCAGTTATTTCCATGTGGTACTTCATTTCGTGACATAGATGAAAAGATTACTGTTTTGGTCTATATAATTCATCTCTCGAATGAGATTATGTTGTTTTCACTTTTCAGGTCTATGCAGTTGATGCAAGTGATATTGCCTTACAGGTAGAGCCTTCCAACACCCTGTTTTACTTCTGTAGTTTTCCAAACTACAGTTGTATTTATTAATCATGAGCCGAGCTGCAAGACTTATTTGGTAGCATGAAAATTGGTAAATCATATAGCAAAAGATTTTGTTGCTTTATATTTTGTGATATGTCAGTACTCTGCTAAATATGCATATTCTTGAAATGCTTTTGCAGTTATGCCAGCATATGATTTTACCTTCTGCATTCTATTATTACCTTCTACAAATTGTGGTGTTGATTCTGATTACATTTGTAATCTGAAAATGTTTAGGCTATGGAAATTGTGAGAGAAAATGAGTTATCTGACAAAGTCATTGTTCTGCACGGTCGAATTGAGGTGCGTGTTTCTATTTAATCTTTGCCATTCCCCACAATTGCATCTACTGAGCTTTATCATACTTTTCATGTGAGGCTGTAACACTTTCTGGCTTAGACCATATCCTTCTTTTGCAACCATCCTTAAAGTTCTATCTTTTATTGTGGTTTTGTTACTATCCTTATAATTCTACTTTGAGGTCCTCCTTGTGTTATCCAGTATTATTATATTAGAATATTTGAAAATCAGGATGTCGAAATTGAAGAAAAAGTCGATGTCATCATATCTGAATGGATGGGCTACATGCTTCTGTATGAGGTATATATAAGTTCCATGTTTATGCTGCTGATCTTACTCCACACATCATTTTACATGTGTGCTATCTGTGGAATTTGAAATTAGTCATGTTGATGGTAGAGTATGCTGGGGAGTGTAATCTTTGCTAGAGATAAATGGCTTAAACCAGGGGGTCTTATTCTTCCATCGCATGCATCGGTAAGATTTGAGAAAAATGTCATGCTGGAATTTAACTAGCTGAGAGTTGATATAGTTATTGAAAATTGTCAGGCTGACATACAAGAATAATTTTGTGTTGCAGCTTTACCTGGCACCTATTACAAATTCCCACAGATATCAGGATAGTGTTTACTTCTGGCAAGACGTGTATGGTATAAAAAGTGAGTTGGTGTTGCGCCCATAATCCATATAGGAGTATATCCTCTCTTTCTGACTAATATATATTCTTAGTATGAGACTTAGTTATTTTGTTCATGATATGCACAATAGCTCGCAGTGCAGATAGCTTGATGAGGAAGCTAACAGTTGTTTCTTATTCTCAGAATAATTTGTAGTGTTTTCTTTGCTTGACTTCAGTGTCTTCTATGATGCCTCTTGCAAAACAATGTGCATTCATGGAGCCATCTGTTGAGACGATTAGTGGAGAGAATGTTCTGACCTGGCCATCAGTGGTGAGGTTCTAACAATTAGTTCTTGGCGAACCATTTCTCTCTTCTTGACATGAATTTAATGTGCATACCACACACAAGCCTCAAAATATAATTTCTGTTTGTGTTTCTTGCTATTTTATCTGGAGTTTTGCATTGAGTACTTGAGTTTCTGAAGCAGGTGGCGCAGGTGGATTGTTATACCATACAAGCTCCAGAGCTTGAAACTATCACTGCTACATTTAACTATACGTCGATGTTGCAAGGTAACTTGTACTAGTTTATTTTTTTACATGTGCATTTTGGTATAGGCGGCAACCAACTATGTAATAGTTTCCAACATCTGTCCCCCCCCCCCCCCCCTCTTTTTTTTACTTCATTTGCTGGGAAACTGTTGCTGATCCTGCTCTCTTCTGTCTTGTCTTGTTATTTTAGCTCCATTGCATGGTTTTGCATTTTGGTTCGATGTCGAGTTTAATGGACCAGTGCGCCAGAGATCCAAGAAGCAAGCAAACCAATGCTTGGATGGGAACACACAAGATGCCAGCCCAAGTAATAAAAAGAAAAAGGCAGATGCCCCAATTGTTCTGTCGACTGCACCGGAGGATGCACCTACCCACTGGCAGCAGGTGATTGCTTTGTGCCCTATCTATTTTCCTTTTTGTTTGGGTATATTGAAATACCTAGAGAATTACAGTTAAAATCCACAATAGTGATAGCATTCTCTCTTTCAGACCCTATTGTACTTGTTTGAACCTATCGAGCTAAAGAAAGATCAAAATATTGAGGGTTCTGTTACCATATCTCAAAGCCAGCAACATGCTCGCTTCCTCAACATCTGCCTGAAATATTTGTAAGTCTGATTACTCTAGCGCAGTTTCATTCTTATCATGATCTTCTGCTACTAAAGCTTAATATAATTCTGAATCCCTCACGTATTTGCAGTACTAGAGATCAATGGTATGTTAAAGAATCGGTGATGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033174