Os11g0116400

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0116400| Description = Similar to Elongation factor P (EF-P)| Version = NM_001072120.1 GI:115483852 GeneID:4349608| Length = 2936 bp| Defi...")
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Gene Name

Os11g0116400

Description

Similar to Elongation factor P (EF-P)

Version

NM_001072120.1 GI:115483852 GeneID:4349608

Length

2936 bp

Definition

Oryza sativa Japonica Group Os11g0116400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:733255..736190

Sequence Coding Region

733301..733427,733535..733612,734400..734506,734936..735013,735409..735510
,735685..735763,735862..735980

Expression

GEO Profiles:Os11g0116400

Genome Context

<gbrowseImage1> name=NC_008404:733255..736190 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:733255..736190 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctctccgcctccgccacctctctccctccggcgccactgcaccaccctcctccttcgcccaactccgccgcccttcctcctgcctcgccggaccacgacctctccgctctcgtctcacccgggtgtatgcgctgtccagcaacgacatcagggtgggctccaacctcgaggtcgacggagctccctggaaggttattgaatttctccatgtcaagcctggaaaaggtgctgcttttgtaaggacaaaaatgcgtaattatatcactggcaacacagttgacaaaacctttcgagctggaagtacgatcccagaggcatccatttcaaaggaaactaagcaatttacctacaaggatggagcccagtttgtgttcatggatctgactacctttgaagaaagtcgcttaaatgagtcagatgttggcgacaggcagaaatggttgaaagaaggaatggactgcaatttgttatactggaatggacggatcattgattttgatctccccatcaccgttaggctgactgtaactgatactgacccagggcaaggtgacagtgcacaaggaggaacaaaaccagcaaccgtggaaacaggagctgttgtcacagtgccctcgtttgtgaacgtaggcgatgatatcctgattgattcaagaactggccagtatatgaacagagcatag</cdnaseq>

Protein Sequence

<aaseq>MASLRLRHLSPSGATAPPSSFAQLRRPSSCLAGPRPLRSRLTRV YALSSNDIRVGSNLEVDGAPWKVIEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRAG STIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLY WNGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILI DSRTGQYMNRA</aaseq>

Gene Sequence

<dnaseqindica>47..173#281..358#1146..1252#1682..1759#2155..2256#2431..2509#2608..2726#atcgcatcacttgagctgccaggtgccagcgtcactcagctgagctatggcttctctccgcctccgccacctctctccctccggcgccactgcaccaccctcctccttcgcccaactccgccgcccttcctcctgcctcgccggaccacgacctctccgctctcgtctcacccgtacgctacgcccgtatccttcccttcatcccattgtcccaatcccgacttcttcttttctcagctgactgcttgagtactactgcttgttcctttctttcttgcaggggtgtatgcgctgtccagcaacgacatcagggtgggctccaacctcgaggtcgacggagctccctggaaggttattggttcgtaatcgtatccactcacaatctcatcttctttcttcctttctgctagtactaaaaacatacctgattcctggttggagtctcccagtggatacagtagctttgttgaacatacctcatgtagccacaaatttcattatttcaaggcacattattatctgcattgcatatataggaccagatggggggacgaaagctgctaccttgatttctttatcacattttaggaagaataacaactcccttttatacaactgcaatccatgttgttcataagcaatgtgacactctagtgctataaaaaccaattattttcttgcttgttacatccactgtttcagaagaattacctcctttcatacctttcagtgtgtacttgagcaaatttgcttctgttggttcgatttttcaaacttcacatatagcttagcttgccacaatatgtgaatgttatttgctttcccaagtattccccgcttttcagatcactcactgctatgtttctttcagttactagaatggaatggtaaagcatactctagtacctataaaatgagctttaagagtttcatttgttacgtttgatctaaataaaattatgtgtttttcaaaaaaattccagacaaatctatatctgtgaaaaaacaaatgttgaaatgtcatagagtattctgacagatgtatataatttcttgccatctattgctcatctattccattttactttagatgctcgatataagaaatatagcatataaaactttctgtcttcatgcaacaacagaatttctccatgtcaagcctggaaaaggtgctgcttttgtaaggacaaaaatgcgtaattatatcactggcaacacagttgacaaaacctttcgagctggaagtacggtaatccaagcagaaactcacctttctaaacctgtagaaattactctctccgtttcaggttataagacgttttgactttggtcaaagttagattgctttaagttttaccaagtttgtagaaaaaagtagtaacattttcaacccaagacaaatttattatgaaaatatattcaattattgatttgatgaaactaatttagtattatcaatattactatatttgtctataaatttagtcaaatttaaagcagtttgattttgaccaaagtcaaaatgtcttataacctagaacggagggagtaccattctgtgactgtatcagatcatgctttagcttatgtaatcagaagcaactgatatgatactcatcaactctccttcaatgtgttctaacaaagaagagcacttattttgtcacttttgttttagatcccagaggcatccatttcaaaggaaactaagcaatttacctacaaggatggagcccagtttgtgttcatggatctggtacatgtttcagtttttcattcaaacatatcatgaaaagagtagtcgctagctgtctgtatgcttcagtaatcagtatgcaatggaacacccatgtttgaaatttaagcacgtgctaaccatatggaatatggtactatagaaacatatgaattgaactcgctgatttctacaatgtagaaactactggtagaagtatcgtttaaagttttatggacagtcggaagttttacagacagacagtcaagttttagaaacatatgaattaaacttgccgattccttttgttttcagcaaactgctgccaaaaaagaaggcaaagagaatgaatggttcttttatggtgtgttccccaagtgcataatgttacttatctttataattttcctttccagactacctttgaagaaagtcgcttaaatgagtcagatgttggcgacaggcagaaatggttgaaagaaggaatggactgcaatttgttatactggaatggacgggtatttcctgttttgtttttacataatctgctgtccaaatccaatcaattaattggctgttgtcagttcatatgttcctattttgtttcaaactcttgataatgtgctgtttgattagttatgtattcttgcacagaataggatattggtcactgacattaatatgtcctgcagatcattgattttgatctccccatcaccgttaggctgactgtaactgatactgacccagggcaaggtgacagtgcacaaggtataactgcatgtgaatatcacaattagaaaaaaaaatgttttcttattaaagctgacacgatcagaataataatcttttaactgtatattttgtaggaggaacaaaaccagcaaccgtggaaacaggagctgttgtcacagtgccctcgtttgtgaacgtaggcgatgatatcctgattgattcaagaactggccagtatatgaacagagcatagaagagatgagagactagacatcaacagagcattagtttttgtctccgcatttttggcccattccctcacctcacccaggcttgactgtattgtttacagcatttgaaccctcgacaggatcaaaatgctttctcaaatttttgtactgcatatgtgcgtacatatttcaccagagcagatgattaatgagacaaacacattgtaagatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0116400, RefSeq:Os11g0116400