BGIOSGA033198

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Revision as of 05:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033198| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033198, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA033198

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033198, complete gene.

LocusTag

OSJNBA0041P03.3

Ensembl Transcript ID

BGIOSGA033198-TA

Ensembl Protein ID

BGIOSGA033198-PA

Length

3854

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17705118..17708971

Sequence Coding Region

17705118..17705125,17705434..17706070,17706487..17706909,17707002..17707247,17707357..17708022
,17708461..17708516,17708600..17708693,17708792..17708971

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17705118..17708971 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17705118..17708971 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAAGGCAAAGGTTACTGATGGATCATGATAGATCTAGAAGGCATAAATCAAATACTTCCAGAAAAAGGCCACATTTCAATTCTGATGACGGAAAGAGGAAACGGCTAAACTCAAGGCACGATGATGGAACCATATCTTCTGAGCCAATAGAAACCATTTACAGGATACTGTGTCCGGTTAAAAAGATTGGCAGTGTCTTGGGAAGAGGCGGTGATATTGTTAAGGCACTAAGAGACACAACTAAAGCAAAGATAAGGGTTGCTGATTCCATTCCTGGTGCAGATGAGAGAGTAATTATTATCTTTAACTACTCAAGTCAGACTGAAGAAGCTGCTCAAAATATTTCTACTGATGGATTTGAGGACATGAAGCCTCATTGTTTTGCCCAAGATGCCCTGTTGAAGATACATGACAAAATTGCAGCAGATGAAGATCTCCATGCTGGAATTGTTCATGAAAAGTCTGAAAATGTTGATGATGTAATTGCTCGAATTTTGGTTCCAGGAAATCAAGTTGGCTGTCTTCTAGGAAAAGGTGGCTCCATTATACAACAGCTACGAAATGACACTGGAGCAGGGATCCGTGTCTTACCATCTGAAAATCTTCCTCAGTGTGCACTTAAAAGTGATGAATTGGTGCAGATATCTGGATCTTCTTCCCTTGTAAGAAAAGCTCTCTATGAAATATCTACTCGTCTGCATCAACATCCTCGTAAAGACAATCCACCTCTGGAAGAAATTATAGATGCAAGCACACAAAGGAAGCATCAGGCTCCACCACAATTACCACATGCAAATCCAATGTTGCCACACCTGCATGTGGATCACTCACCACAAATACCCTTGCTTGATCCATATAGAAACAGGCCACTGCAGTATCATTCTGCTGAAGCTGAAGAGTTCTCTATTAAAATTCTGTGTGCTTCTGAACACATTGGTCAAGTTATTGGGAAAAGTGGTGGCAATGTTCGGCAAGTCGAACAGCAGACAGGTGCTTGCGTTCAGGTTAAAGAAGTTGGCAAAAATGCTTCTGAAGAAAGGTTAATTGTTGTTTCATCTCAGGAGATTCCAGATGATCCAGTGTCTCCAACAATTGAGGCGCTTATTTTGCTCCATAGTAAAGTAAGTACACTTGCTGAGAATCACCACTTGACGACACGGCTTGTTGTACCATCAAACAAAGTTGGTTGTATTATTGGGGAAGGTGGAAAGGTAATTACTGAAATGAGAAGACGGACTGGGGCTGAAATCCGAGTCTACTCAAAAGCAGATAAACCTAAGTACTTGTCTTTTGATGAGGAGCTTGTGCAGGTTGCTGGGCTTCCAGCTATTGCAAGAGGAGCCCTGACAGAGATTGCTTCGAGGCTTAGAACTAGGACACTCAGAGATGGAAGTTCTTCCAATAATCCGACACCTTTTGCCCCTTTTGATGGTCCTCCTGTTGATATCTTGCCTAACAGGGAATTCATGCTATATGGACGATCTGCCAATAGTCCCCCATATGGAGGGCCTCCTAATGATCCACCATATGGAAGACCTGCCATTGATCCACCATATGGAAGACCTGCCATTGATCCACCATATGGAAGACCAGCCATTGATCCACCATATAGAAGACCTGCCAATGATACATCATATGGAGGGTTGAACAATGATGGGCCTCGTGATCCTTACACTGCGTATCCTGTAGAGTACTTCTCTAAAAGAGAGTACCCTAGTGGAAATAGCAAAGTTACACCATCTGCTTCATACGACAGATATGCAGCAACTACTCGCTTGCCTAATAGAGAACTGCCCTCATCTATTAGTCCTGGTGCCGATTATATGTCCCGCCGTTCTTATCTTGACCAAGTACCTACTGATAGGTACTCTAGTAGGGGTACACTACAATTAGGCCTCTCGAGAGCTGGGAATAGTAATGTGCAACAATTAGGAATCACCAGAGCTGGAAATTCCAATGCTTATGATTATACCGAGGCTGCTGAGCAGATCCATGGACGTGAGGATTACCGAAGACTGTCAGGTCTCACTGGGTATCCAGGTGGCTCCGTCGAATTTCGGATTCCAAATAGTTATCTGGAATCTGTCATTGGAGCTGGTGGTGTCAATCTAGCTGAGATCCGTCAGATCTCTGGCGCGAGAGTGAAGTTGCACGAAGCCCATCCCGGTTCTTCCGAGTCCATTGTGGAGATCCAGGGCATTCCGGATCAAGTGAAAGCCGCACAGAGCCTTCTGCAAGGTTTCATCGGCGCAAGCAGCAACAGCAGGCAGGCGCCCCAGTCCTCTCGCATGGCCCATTATTTTTAG</cdnaseq>

Protein Sequence

<aaseq>MTRQRLLMDHDRSRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSYGGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASYDRYAATTRLPNRELPSSISPGADYMSRRSYLDQVPTDRYSSRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGYPGGSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQSSRMAHYF</aaseq>

Gene Sequence

<dnaseqindica>1..8#317..953#1370..1792#1885..2130#2240..2905#3344..3399#3483..3576#3675..3854#ATGACAAGGTATATATTTAGTTACTGTGGCGTGTGTTCAGTGAGGTGACTTTAAAGTTTAGATGTATAGCCTTTGCCTGTTATTATTGTTCCTGCAAACAGCTACGAGTAATTCCATAGGCCCAAAGTATCCACATAAGCATTTAATGGCAACTTTTTTCCATGTTGAGTTATGCAAAAGTCACAAGGTCATGCATGTTGCCATCATGGAACATTTCTCATACTTCTATCGTGCGCCATGTCCATTATTTGTGTGCTGCCTGTGTCCTACATTATGTCTAATTCTCATTTATGTTGATGGACTTTTCCTTATGCAGGCAAAGGTTACTGATGGATCATGATAGATCTAGAAGGCATAAATCAAATACTTCCAGAAAAAGGCCACATTTCAATTCTGATGACGGAAAGAGGAAACGGCTAAACTCAAGGCACGATGATGGAACCATATCTTCTGAGCCAATAGAAACCATTTACAGGATACTGTGTCCGGTTAAAAAGATTGGCAGTGTCTTGGGAAGAGGCGGTGATATTGTTAAGGCACTAAGAGACACAACTAAAGCAAAGATAAGGGTTGCTGATTCCATTCCTGGTGCAGATGAGAGAGTAATTATTATCTTTAACTACTCAAGTCAGACTGAAGAAGCTGCTCAAAATATTTCTACTGATGGATTTGAGGACATGAAGCCTCATTGTTTTGCCCAAGATGCCCTGTTGAAGATACATGACAAAATTGCAGCAGATGAAGATCTCCATGCTGGAATTGTTCATGAAAAGTCTGAAAATGTTGATGATGTAATTGCTCGAATTTTGGTTCCAGGAAATCAAGTTGGCTGTCTTCTAGGAAAAGGTGGCTCCATTATACAACAGCTACGAAATGACACTGGAGCAGGGATCCGTGTCTTACCATCTGAAAATCTTCCTCAGTGTGCACTTAAAAGTGATGAATTGGTGCAGGTAACTTCAAAAAACTTATTTGTTATCTTTTGTTCCAACTTGTTTTGTATCCGTAGTTTCATTCATGCCAATGTCCTTGAGTAATGGTATCAGTTAACTTGGTTTGTGTTCATTCGTTACTCGTGAAAAACAAATCACTCAGTATGGCATATATCAATCCTTGTACTACTATCTGAGTTTCTTGTCAATATGCCCTGTTAAGCTCTTGAATGAACTAAGTAATGGAACTTTTTGATCTGGCATGGAGTTTTTACCTCTCTTAACTTTTTGTCAATATGCCTTTTTTCCTTAATGATATGTAATTTCATGTTGCAAAATTGCAATGTAATACCATGATGTGCATCAATGGAAGTATGATTGCTTTGTCAATTTGTTGTTTTTGGAAATCACTGTCACTTGGGCTTATGTTATTTCAGATATCTGGATCTTCTTCCCTTGTAAGAAAAGCTCTCTATGAAATATCTACTCGTCTGCATCAACATCCTCGTAAAGACAATCCACCTCTGGAAGAAATTATAGATGCAAGCACACAAAGGAAGCATCAGGCTCCACCACAATTACCACATGCAAATCCAATGTTGCCACACCTGCATGTGGATCACTCACCACAAATACCCTTGCTTGATCCATATAGAAACAGGCCACTGCAGTATCATTCTGCTGAAGCTGAAGAGTTCTCTATTAAAATTCTGTGTGCTTCTGAACACATTGGTCAAGTTATTGGGAAAAGTGGTGGCAATGTTCGGCAAGTCGAACAGCAGACAGGTGCTTGCGTTCAGGTTAAAGAAGTTGGCAAAAATGCTTCTGAAGAAAGGTTAATTGTTGTTTCATCTCAGGAGGTAATATGCAGATGATTATTCCAATTGGCATTGCCTTACCATTTTTATCATGAGTCTTTACAATATTATATCCTCCTACATATTCTTTCCAGATTCCAGATGATCCAGTGTCTCCAACAATTGAGGCGCTTATTTTGCTCCATAGTAAAGTAAGTACACTTGCTGAGAATCACCACTTGACGACACGGCTTGTTGTACCATCAAACAAAGTTGGTTGTATTATTGGGGAAGGTGGAAAGGTAATTACTGAAATGAGAAGACGGACTGGGGCTGAAATCCGAGTCTACTCAAAAGCAGATAAACCTAAGTACTTGTCTTTTGATGAGGAGCTTGTGCAGGTAATTTATTTGGCCATACCTACACCAGAGATCCATATATTACCTTTATAACTACAGTTTTTACTTGTTAACATTTCATTGTGCTTTTACATTTGTTCCAAGCTTTCAGGTTGCTGGGCTTCCAGCTATTGCAAGAGGAGCCCTGACAGAGATTGCTTCGAGGCTTAGAACTAGGACACTCAGAGATGGAAGTTCTTCCAATAATCCGACACCTTTTGCCCCTTTTGATGGTCCTCCTGTTGATATCTTGCCTAACAGGGAATTCATGCTATATGGACGATCTGCCAATAGTCCCCCATATGGAGGGCCTCCTAATGATCCACCATATGGAAGACCTGCCATTGATCCACCATATGGAAGACCTGCCATTGATCCACCATATGGAAGACCAGCCATTGATCCACCATATAGAAGACCTGCCAATGATACATCATATGGAGGGTTGAACAATGATGGGCCTCGTGATCCTTACACTGCGTATCCTGTAGAGTACTTCTCTAAAAGAGAGTACCCTAGTGGAAATAGCAAAGTTACACCATCTGCTTCATACGACAGATATGCAGCAACTACTCGCTTGCCTAATAGAGAACTGCCCTCATCTATTAGTCCTGGTGCCGATTATATGTCCCGCCGTTCTTATCTTGACCAAGTACCTACTGATAGGTACTCTAGTAGGGGTACACTACAATTAGGCCTCTCGAGAGCTGGGAATAGTAATGTGCAACAATTAGGAATCACCAGAGCTGGAAATTCCAATGCTTATGATTATACCGAGGTACATTTCCAATGCGTTAGCTTGCCTCTTCTTTGCAAATGGCCCTCGCCTGATATGTTTCCATTAGAAACATGAAACCATATATATGACTGTTGCATTATGTCTATTTTCTTCCATGATGGTTCAGATGTCTGAAAAAAGGACCAAAATATTCTAGAATATGTCATGGTGATCCAAATATATCCTTCTGTCTTGTGCCCACTCTAATATCTATCATTGGTAACACTATTCAATTGTTACGATGTTGTTGCAAACCCTAGATTCAGTTATTCAGCTGTTCTCTGCTGCTGTTGCTTACCAGTTTTCTTAGTTGGGTGTTGATCTTTTCTCATTTTTTATTTCCTTGTTTCCTGGTTCACCTGATGCCTCTCTGATGCATCTGAATGTATATTTTTGTTCTCTTCAGTGCTTAATAGATTTGAATTTCATTCTTTTCAGGCTGCTGAGCAGATCCATGGACGTGAGGATTACCGAAGACTGTCAGGTCTCACTGGGTATGGCTTATGCAAACTGAATTTTTACAGGACACAAACGTGAATTTTGTCCTCATAATCATTGAGTGATGATCTCTTTGCAGGTATCCAGGTGGCTCCGTCGAATTTCGGATTCCAAATAGTTATCTGGAATCTGTCATTGGAGCTGGTGGTGTCAATCTAGCTGAGATCCGTCAGGTATAGCGTATGCGAAACATCACGCACTATGCCCAGTCTTAACCATGCCCCAATGGCCTCCAATAGTTTTCCTCATGAAAATCTCCCCTTGATCCCAGATCTCTGGCGCGAGAGTGAAGTTGCACGAAGCCCATCCCGGTTCTTCCGAGTCCATTGTGGAGATCCAGGGCATTCCGGATCAAGTGAAAGCCGCACAGAGCCTTCTGCAAGGTTTCATCGGCGCAAGCAGCAACAGCAGGCAGGCGCCCCAGTCCTCTCGCATGGCCCATTATTTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033198