Os11g0116900

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0116900| Description = Similar to WRKY transcription factor 46 (Fragment)| Version = NM_001072122.1 GI:115483856 GeneID:4349610| Length = 3...")
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Gene Name

Os11g0116900

Description

Similar to WRKY transcription factor 46 (Fragment)

Version

NM_001072122.1 GI:115483856 GeneID:4349610

Length

3735 bp

Definition

Oryza sativa Japonica Group Os11g0116900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:758595..762329

Sequence Coding Region

758898..759381,761916..762026,762167..762327

Expression

GEO Profiles:Os11g0116900

Genome Context

<gbrowseImage1> name=NC_008404:758595..762329 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:758595..762329 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccttcttcttcctctccctcttccctaccaagcgagaccactcggcccccacaaaatctccgcttcttctccgagaccgagatggcactcgactctgttccatcctaccccagcgatcttggatccagcagggccaggacgccgcagcagcaaagggtcagccccaggaaggaggagcggacatggacgaccgacacctacgcgccgtacgacgacggccaccagtggaggaagtacggcgagaagaaactctccaattccaacttcccaaggttctattacagatgcacctacaagaatgacatgaagtgccctgctacgaagcaagtccagcagaaggacactaatgatccaccattgttctcagtcacttacttcaaccaccacacctgcaacagcagctcaaagatcgtaggcagcactcctgattctactgtgcagtcgaggaaagccatttcgatctgcttcaattcacatggccaaaccggtgaacagcccacattcttgtcatcatcagcttccttgttgtcaccgagcatgcagtcgtacagttccaaccagcaacctgacatgaacacctacagtcgccagtttcagtgggcagacacatcgtcatctacaagcaatgctccggttaagatggaggcggacgattatgcagaagcaagtgcttcacccagtaccactggtgctctgtcgaggacattgctgccgatcggtcagtcaagatgcatcgagtatttccatttcttgtga</cdnaseq>

Protein Sequence

<aaseq>PSSSSPSSLPSETTRPPQNLRFFSETEMALDSVPSYPSDLGSSR ARTPQQQRVSPRKEERTWTTDTYAPYDDGHQWRKYGEKKLSNSNFPRFYYRCTYKNDM KCPATKQVQQKDTNDPPLFSVTYFNHHTCNSSSKIVGSTPDSTVQSRKAISICFNSHG QTGEQPTFLSSSASLLSPSMQSYSSNQQPDMNTYSRQFQWADTSSSTSNAPVKMEADD YAEASASPSTTGALSRTLLPIGQSRCIEYFHFL</aaseq>

Gene Sequence

<dnaseqindica>2949..3432#304..414#3..163#cgccttcttcttcctctccctcttccctaccaagcgagaccactcggcccccacaaaatctccgcttcttctccgagaccgagatggcactcgactctgttccatcctaccccagcgatcttggatccagcagggccaggacgccgcagcagcaaagggtcaggtaggtatctattgctaccattcttttctcctccatcgatctcttgcttgcagcaaagggcctccccatgtgtgtgtagttcttgatctgttctctcttcatttgtggtgggtgcgatgccattgattctgatatggtagccccaggaaggaggagcggacatggacgaccgacacctacgcgccgtacgacgacggccaccagtggaggaagtacggcgagaagaaactctccaattccaacttcccaaggtaccttccgccctccatttcttttttcgcacttcatttccttcccccaaaattactagacttcatgcatgcatctatttttctttccctcaaaggtcatatttttactgtcttccatggttagaattcgcagaacggttaatttcagattttactagattcaccaagctaattttaagtacatgcagagtacttgtattaggtgagtgaactatgggtggtgatctgaaaccttggggaatttcaagttccccctttgaattttggcaggaaaattttcttcatgccatcttttttctgagaaaattgcaatattgggactgcaaacatgggggcttcgctgttttgacactccgagtgaatgacaaatgggcccatctgtgtgtatgaaatgtgagtccagtgtcattatagcaaaggttaatatttgcagtgtcataattgcaaatccccggtttctttagttttcgcctattcggtagttctggtagaacagctcctactcaccaataccttccagaatggaagtgtgttagtgtggtccaaacagagctgttaacaggctccatatgtgtgcttagttagtgtttacatcttgagagcgaatttcagttgaaaccggagaacaaatctagcagggactagttctgttcatgtaactcggtaattgcgctctcatgttcacatttcttaaatatttatgggtatagcaggagtcttatttatggggccaaactatagtctttgtttgtgcagctggtggtttactataacccaaatcatgtcgatgcctaatattgtgtccattgtatatcagcagatggtttggtcaatgcattaatttaggttcttgaaaagaacattcttgtgttctgtggacacaaattaggctgcatggttgtccgctagtcatctcttggtagaattgcgaagggcaccttttcggtagtttggtagaatagctcctactcaccaatttcttccataaccaaagtgggttagggtggtccaacaaatctgttaacaggctctagatgtgtgcttagtgtttacatcttgagctaatttcagttgaaaccggaaaagaaatctagcaaagactacatctgttcatgtaaatgaactcacatgttcacatttccttaaatatttatggatatagcaaaagtctcatttttggggccaatctctagtctttgtttgatcagctggtggtttactataacccaagtcatgtcgatggctaatactgtgtccagtgtttgtatatcagcagatggtttggtcaatgctttaatttgggttcttgcaaagaacactcttgtgttctgtggacacaaattaggctacatggttgtcttctagtcatctcttggtagaattgcgaggggcacttgtcgggcctgtcggcagatgcctttagtgagcaagattaaaaacgatagtaaattgaccatgggaaaagaaccttcatagcagcaatctctttggtaatcgacaactcaacaagacatataaaaatttgaaaagtgagaccatataaataaaaaatatgcaagtggttctcttttattgcctgtcatcagcgacttgtttgatatctaatgttttcctaacagaatatatactacttgtgtttttcaagcacattttgtttgcaaatattaccgtgcatgccgacagtctccacaaactcttttttacttccttggagtttgattggcatgcagcctgagggaagaccctacatatcttgtttgctcacaagagcttgctaatagttgcagtcagttctttttgcaaaaggtaatttatgaaaggtctgaaaagtatgtgttggcaaccgctccgcctaatttaggtagagtaaatgttcgtggagaaaagtgcaaaagagacatgatttaagaatacaaatgtttttcctgttgtcttaaattaaggtttgttacactgaatgacactgcacatatatatgcaaactgtaaagtaccacggttcaagaactggtaaagaagaataactcaagttggtaccctaaaggtgagattgcgtgaagatgagttgaagaatgtgttgttcaacctttcaacttggaatatagtaggaatatgcaggatagtgctggctttggtgtcaccaagtaaatgaagttccaaaataaattagtgacaaatataccacgtaatttttgtaagtaaacagatcaactaagttttctgatggcattctgaaaagtatggtaataacacattgccaagcggcagatcagaaggtgatcccaaaagagaaaaaaaaagggaaattccactgtatgctggaacggacagtagttagtttcagtgcagtcaccatcattctaaataaagatcagctaaaacggtgtataacagcagcacacagaatcaaaatttctgcatttgtactccctaaatgctacctggaaaaaaaaccaatcccttatctgcagtaatttgcagtaatttccagcaagaaggtattgagaatttgagatcatggccttctatttgcaggttctattacagatgcacctacaagaatgacatgaagtgccctgctacgaagcaagtccagcagaaggacactaatgatccaccattgttctcagtcacttacttcaaccaccacacctgcaacagcagctcaaagatcgtaggcagcactcctgattctactgtgcagtcgaggaaagccatttcgatctgcttcaattcacatggccaaaccggtgaacagcccacattcttgtcatcatcagcttccttgttgtcaccgagcatgcagtcgtacagttccaaccagcaacctgacatgaacacctacagtcgccagtttcagtgggcagacacatcgtcatctacaagcaatgctccggttaagatggaggcggacgattatgcagaagcaagtgcttcacccagtaccactggtgctctgtcgaggacattgctgccgatcggtcagtcaagatgcatcgagtatttccatttcttgtgatgatttttatggaaagtgaaggagatgcatatacattctgaggagcctcttggatggttccagatagggttttatattgggaggtgaggatgttgtgctgatgagattccatatactatagtggcattatgttgttttcttctttgcatgtagattcaagccagatttttgtgcttgaatgatgtaaagaactgaattggcgtttctctatctagtaggaaggagtacgtgatacagaaaaaggcaaatgtagcagaacctgttaaattatactagtataaaattaaggaaaaatctgacagt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0116900, RefSeq:Os11g0116900