BGIOSGA033213

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Revision as of 05:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033213| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033213, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA033213

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033213, complete gene.

LocusTag

OSJNBA0017E08.2

Ensembl Transcript ID

BGIOSGA033213-TA

Ensembl Protein ID

BGIOSGA033213-PA

Length

2266

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17940869..17943134

Sequence Coding Region

17940869..17940908,17941189..17941224,17941679..17941896,17942315..17942476,17942555..17942790
,17942879..17943134

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17940869..17943134 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17940869..17943134 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATCGAAGATGGAAGCAGCTGTAGAATGTCAACAGACCGGAAAAACAATAACGTTACAGCAAAATATGATGGGGAGCTCGGGACGGTGGTGTTCCTGCACGGGTTCCCGGAGATATGGTACTCGTGGCGCCACCAGATGCTCGCCGTCGCCGCCGCCGGGTACCGCGCCGTCGCGCCCGACTGGCGCGGGTACGGGCTCTCCGACCAGCCGCCGGAGCCGGAGGCGGCGGAGTACGACGACCTCATCGAGGATCTCCTCGCCATCCTCGACGCCCTCGCCGTGCCCAAGGCATTCCTTGTTGCAAAGGATTTTGGGGCCTTGGTAGCTTATGATTTTGCTCTGTGTCACCCAAACCGCACATGTGGTGTGATGGGTTTGGGCATCCCTTTCGGTAACGATGCTTCATCCATTAACACCTTGCCAGAAGGACTCTACATTTTTCGTTGGGCGCAACCAGGAAGAGCGGAGGCTGACTTTGGCAGGTATAATATTAAGAGAGTTGTGCGCACTATCTATATTCTCTTTTCTAAGAGCGAGATCCCCATGGCTAAGGAAGATCAAGAGATCATGGATCTTGCAGACTTGTCAACACCCCTTCCTGAGTGGTTTACTGAGGAGGATCTTGATGTATACTCATCTCTCTATGAGAAATCCGGTTTTCGATATCCACTACAGATGCCATATAGGTCTCTCCATAAGAGGAAACCAATTGGAGATGCAAAATTCCAAGTCCCAGTGTTTGTTGTCATGGGGGAGAAAGATTATGTCTACAAGTTCCCTGGCGTCGAGTCTGCTATGAAAGACGGCACTATGGAGAGGCATGCACCAGACATGAAGATCACCTATATCCCTGAAGGGAGCCATTTTGTGCAGGAGCAATTCCCTGACTATGTGAATGAGCTCCTTCTTGCATTCTTGAAAGATCATCCCGTGGATAAATAG</cdnaseq>

Protein Sequence

<aaseq>MTIEDGSSCRMSTDRKNNNVTAKYDGELGTVVFLHGFPEIWYSWRHQMLAVAAAGYRAVAPDWRGYGLSDQPPEPEAAEYDDLIEDLLAILDALAVPKAFLVAKDFGALVAYDFALCHPNRTCGVMGLGIPFGNDASSINTLPEGLYIFRWAQPGRAEADFGRYNIKRVVRTIYILFSKSEIPMAKEDQEIMDLADLSTPLPEWFTEEDLDVYSSLYEKSGFRYPLQMPYRSLHKRKPIGDAKFQVPVFVVMGEKDYVYKFPGVESAMKDGTMERHAPDMKITYIPEGSHFVQEQFPDYVNELLLAFLKDHPVDK</aaseq>

Gene Sequence

<dnaseqindica>1..40#321..356#811..1028#1447..1608#1687..1922#2011..2266#ATGACGATCGAAGATGGAAGCAGCTGTAGAATGTCAACAGGTTACAGGCCCCTAATGTCATTTTCGCTCTAATGTTACAGTTCATCAATGTCAATCAATGAATATGGTTTAGGCCATGCTTAGAAGGTGGGTTTTTTATTGCGAGTTTGTACGGAAGTTTGAGTTAGGCTTTTCGAGTATGACATATGTTGTTTTAATTAAATGTTGGCAGTTTGACATTCAGTGCATTTCAATAAATAGCCGGTGTGGTATGTAAGTACATAACCAACTAGTAGAAGATTTTAATGCACATGACGGGTCTATAATTCAATTTTTTGCAGACCGGAAAAACAATAACGTTACAGCAAAATATGATGGTTAGTCCTAAATACATCTAATTATTATCAAACGCAATAATCTTCAACCACATATGCTAAGTTATTTTAAGCTATAATTACCCATGGTTATAGTCACTAATCACAGCGTCCAATAGTCACAAATGAGGATAGAGAAGATGGAAGCAGCAACATGTAACAGGCAAAAGATAAGCATTTCACTCCACTTTGCAGCAAAGTCAATCCATGAACATCAGTACATCACATAGGTCATGTTTGGAAGGCTGGATATTTTTATGAGTTTCTGTAGAAGACTGAGCAGGTTCAACTAAACCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCGACCACTTCGTTCGATTCCTTGGCTTGCTTTGCCCGCCCGCCGCGCGCGCCGCCGTAGCTAGCCCACCAGGTGTTTGTTTGGCTGTCGCATGCAGGGGAGCTCGGGACGGTGGTGTTCCTGCACGGGTTCCCGGAGATATGGTACTCGTGGCGCCACCAGATGCTCGCCGTCGCCGCCGCCGGGTACCGCGCCGTCGCGCCCGACTGGCGCGGGTACGGGCTCTCCGACCAGCCGCCGGAGCCGGAGGCGGCGGAGTACGACGACCTCATCGAGGATCTCCTCGCCATCCTCGACGCCCTCGCCGTGCCCAAGGTAAGCGCCTGGATCAGTTTGGCTTTTTCACAAATTTTATCCTCTTTGAGTTACTGAGTAAATGAGAGGCAAAATTCATAATTGGTTGGACAAAGTTTAGAAGTTTCGATGGATTTTTGTAGTGTATTGTTTGAGTCATGGATAGGTTGTGACCAAACAAACAAACTTTCAATATCGTAAGGGAGAGATTTGGAGAGGATAATTGATAACACTATCAGTTCTACCGAATTGATCTGAAGCTGGTAGAAGTAGCACCAACAATCAAGAGTATATTAGAGGCCTGAAAAATGATTACAAGATATTAAGGGGCACTTTTTTTTCTGTATAAAGGATGGAAGGATATCAATTATTCCCTACTAAACCAATTCCTCTTTTTTTTTTATTTTCTTGTGATAACTTATACGGTTCTTCGTGTCAGGCATTCCTTGTTGCAAAGGATTTTGGGGCCTTGGTAGCTTATGATTTTGCTCTGTGTCACCCAAACCGCACATGTGGTGTGATGGGTTTGGGCATCCCTTTCGGTAACGATGCTTCATCCATTAACACCTTGCCAGAAGGACTCTACATTTTTCGTTGGGCGGTAATTGTCAGACTGTCATGATAAAACAATAAGTGCATGGTTTGCTTGTAATGACAGTAAAGAAAACTCATCTTGCAGCAACCAGGAAGAGCGGAGGCTGACTTTGGCAGGTATAATATTAAGAGAGTTGTGCGCACTATCTATATTCTCTTTTCTAAGAGCGAGATCCCCATGGCTAAGGAAGATCAAGAGATCATGGATCTTGCAGACTTGTCAACACCCCTTCCTGAGTGGTTTACTGAGGAGGATCTTGATGTATACTCATCTCTCTATGAGAAATCCGGTTTTCGATATCCACTACAGATGCCATATAGGTAAACATCAAGTCATTAATTGTCCATACTAAGTAGTACTGAGCTTAACAATATTTGATAGTTCGAGATTTTGTGCTATGCTTGTTAGGTCTCTCCATAAGAGGAAACCAATTGGAGATGCAAAATTCCAAGTCCCAGTGTTTGTTGTCATGGGGGAGAAAGATTATGTCTACAAGTTCCCTGGCGTCGAGTCTGCTATGAAAGACGGCACTATGGAGAGGCATGCACCAGACATGAAGATCACCTATATCCCTGAAGGGAGCCATTTTGTGCAGGAGCAATTCCCTGACTATGTGAATGAGCTCCTTCTTGCATTCTTGAAAGATCATCCCGTGGATAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033213