BGIOSGA033220

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Revision as of 05:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033220, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA033220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033220, complete gene.

LocusTag

OSJNBA0078O01.7

Ensembl Transcript ID

BGIOSGA033220-TA

Ensembl Protein ID

BGIOSGA033220-PA

Length

2869

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18040880..18043748

Sequence Coding Region

18040880..18041006,18041557..18041852,18042219..18042314,18042946..18043005,18043503..18043748

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18040880..18043748 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18040880..18043748 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGGGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGAGGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGGTTTTAAAGAAAGCCGATTTTAGGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCTGGCATTATAATCAAGAGGAGTCAGACTTGTATAAGTGCGAAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAA</cdnaseq>

Protein Sequence

<aaseq>MASSALRRSLRRLLPSSPPPPSPASAAAAATFRRSFLSGGGDGVGESVEEFEKRMLSGLDDGLENRRGGSDWGWRGGFRNRGNSSSILAELGTGFDSLEDGLDEKLDEASRTFHVTEEYEDDDYDYRPDVTFRRGSTYNVKDLDLTRPAAAKNPPRPQFQTTTEEVLKKADFRNVRFLANFLTEAGIIIKRSQTCISAKAQRKVAREIKTARALGLLPFTTMGQRPFIYGRSVEVNLSEEEYGYDFVDRRAGEPDENADDAVPDEDVAPGVENA</aaseq>

Gene Sequence

<dnaseqindica>1..127#678..973#1340..1435#2067..2126#2624..2869#ATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGTGAGAACCCCCCCCCCCCCCTGCCGCCTCCTCCTCCTGATCGAGAACTCCTCTCGAACGGATCCCTCCATGCGATGTTCCCTAATATAAGTTGTGTCGAATCCTGACCTGGATGGAGTTGTTCGTGCTTGCCCACACCTTCGCCATTTTTCGTTGTAGTTATCCATCGGGTTGAATCGAGTGGCTGGAGATGTAGGTTTAACGCAGATTTGCAGCCACATATGCTGCTTATAAGCCAATTTTTAATTTTTAAATTTAATTTTAGAGTTGATTTTGTGTTTTTTTTCGTTGTAGTTTTTTTATAGCATTTGCTTTTGAATAGCTAAGAACACATATATAAAAGTTGTACTCATAAATTATGTTTTTGTTGACAATAAGCGATTCGGATATGCATAAGCGAAAAGATGAGGCTGTTGATGTAGAGCTTTCGCGTGCAAAATCCCAATTGCGATGACAGTACTAGTGATTGTTTGAGGAGTTGATGCCTAAAAAAGATGTCCCAATAGTACTAGTGTTCTTATGCTTGTTTTGGTTGGCTTATCCGGCGCAGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGGGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGAGGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAAGGTAAGAGGGATTTCTGTTTCTCACATCATTGTTGAAGTATACAAAGAGCACATGCCTTGTGCACTATTTAGGATTACATTTATCCTGAATAAGTATTCTGGAACTCAGCGGTAAATTTGTGAGCTAGAACAGGTTGTGATGTGTTGTATATGTACACACAAATTACATCTTTTGCTGGATACATGCTTGTCAAAACAGAGAAATCCTATTATGATACACTAATGCCTAAACAATTGAAAACTTAGAAAATGTGACTCTTAGTATTAATTTTAGTTTACCTTTTTATATCTGTTTGCTCATTCCATGGACATACTGTAGTGGAATGAGTCTTCTAACAGCATGTTTATCACACTCTACTGCATGCAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGGTTTTAAAGAAAGCCGATTTTAGGGTTTGTACATCTGCCTGACAAACTGTGTAAATAGTCTGCAGTTTATTTTTTAGCTTTTAATGAAATTATAGGTTTTGCATTACTTTGTCACCTTGTATTCTTGTAAACTATAGAGTGTTTAGCCAGTTAACCAGCATGAATTTCAGTAACACATAATGGTGGTATGCTGTGACTAATTTCAAGAACGGTATGTCATTTGAGGAAGTCATAACTTAGATGATGATAGCATGTGATCTACTTTCTATCCTAGAAGTTATAACAATTGAGATTCTGGTATTTTATTTACCGCTGTTGTGTTTGAATTTTAACAATAACTAAAATAGTTTACTGTAGTGGGTTGATATGTTGCTTGTTAACCTACTTATTTGAATTATTGCCTCACATTATTCTAAGATGACATTTGGATGCAAATACTGGAACACGGTAACTATCAAAGTCGAAATCATTGGGATGTATGTAGGCATGTATTTCAAGTTTCAACGTGTAAAACGAGTGTGCATGGTTGAAAATTAACAATTCAGAATGCAGAAAAAACAAACATAGTTTTACATTTGAATGATACAATAACAAACAATGATCTTGCCTGTATATTAATAGCTGCAGTTTTTGATTACTTGGTTGTTCCTTGCAGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCTGGCATTATAATCAAGAGGAGTCAGGTAATAAGGAACTTTTCCCCTTTCTGTGCATAGAAATTTGGGTAATGACACTCCTGATGTATGGTAATAATTCATCATGCTATTTTAGATAGCTTTCAAATTGATATTTTCAGAGTAGAATGGTCTCTATAAGAAAGGATTGCCAGAGTTCAGATAGCAACTTTTATTCAATGCATGCACAGGGACTCAAAGGTTTCCAATATTCTAAATGTAACTTTTGATCACTAGACATAAATATTGTCTTGTTTGTATAGTTCATGCATTGCTGATGATGCTGTTAATGAGATATCTTTGTTGATTCTTGTTGGACGTGGTCTTTTCAGTGCTTAGTTCTAAAGCAACACAATATCATAATTAAGGTGCCACGTAGCACCATCTCTCCTCGGCAACACAATATTCATGTTTTGCTGTATGAGTCTGTTTCACAAATGCACACGTAATTATGTATTTATATAAATGCTTTGCCATAGTTTCTAACTTATTGATCTGCTTTTCAGACTTGTATAAGTGCGAAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033220