BGIOSGA033223

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Revision as of 05:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033223| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033223, complete gene.| tag = OsI_342...")
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Gene Name

BGIOSGA033223

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033223, complete gene.

LocusTag

OsI_34208

Ensembl Transcript ID

BGIOSGA033223-TA

Ensembl Protein ID

BGIOSGA033223-PA

Length

4486

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18057089..18061574

Sequence Coding Region

18057089..18057153,18059012..18059144,18059225..18059274,18059616..18059658,18060756..18061574

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18057089..18061574 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18057089..18061574 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTCGGCGTGAAGGTGACAGCAGCGCTGTCGCTGATCCTTGCGAGTCTGGCCTCCGGAGCATCCGTATCGCAGATGTTTCGCTATAAGCTGAAAGCCATTGAAGCACACAAAGCATGGATGAAGAGCCCTGAGGTGCTTGAGAACTGTTCCACTGGACTTCATTTCCCTGCAGAGCAAATAGAGAACTCTGAGGAGCAGGAGGTGATTCCACTGAAGTCGGTTGCTTTCTATGCAGCTGACGGAAGCATAATCACAGTTTACACAGTATGGGCCTTTTGTTTTCAGGTTCTCGAGAAGGCCGATTCGTGCAATGATCTTATGACCTGGCACTCATACGCCACTATAGGCAAGGTTCTCATGCAATCTGGGATGGAAGAGAGGGCCTTGCAGGCTTTTCAAGAATCAGAGAAGAAGATTGCTAAGAAGAGTAATAGGGTCGCATATGGGTTTTTGCTCACCATGTATGCCGATCTAGGGATGAATAGTGAGGTGGACCGAATCTGGGATGTCTATAAATCCAAAGTGCCAGCATCGGCTTGCAACTCAATGTACATGTGCAGGATAAGTGTCCTACTTAAGATGAATGACATTGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATTCCCGGTTAATCAACTTACTGCTCACTGCTTACTGCAAAGAAGGTCTTATGGAGAAGGCAGAAGCTCTTGTAGATCAATTCGTCAAGAAAGGGAGGACGCCTTTTGGCAATACTTGGTATAAGTTGGCTGGTGGATATTTCAAGGTTGGTCAGGCGTCGAAGGCAGCAGATCTCACAAAGAAAGCACTTGCTTCTGCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCCTGAACTATTTCGCGGAGCAAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTACAGAGATTGGTTACTCCAACAAGGGACATTTACCATGGGTTACTGAAGACATATGTCAATGCAGGAAAACCAGTGTCAGACTTGCTTCGTCGTATGAAAAAAGATGGTATGGAGGCTGATGAGGAGACAGAGAAAATCCTTGCGGGAGAAGTCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MSLGVKVTAALSLILASLASGASVSQMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQEVIPLKSVAFYAADGSIITVYTVWAFCFQVLEKADSCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLRRMKKDGMEADEETEKILAGEVH</aaseq>

Gene Sequence

<dnaseqindica>1..65#1924..2056#2137..2186#2528..2570#3668..4486#ATGTCGCTCGGCGTGAAGGTGACAGCAGCGCTGTCGCTGATCCTTGCGAGTCTGGCCTCCGGAGCGTAGGTGGGGTCATCGGTTGCGGCAGAGAAGGCAGCAGCGGTAGCGGCGGTGTGCCGGCTACCTAGCGGGGATGGAGCAGGAGCTCACCTCGTCGGGGCCGTACAAGGACCTCAAATCCATGGGAAGCTCAAACAACTCGTTCAAGTTGTGATCCATGGACCAGACAGCAGCTTGTGTGGCTTGTGAATTCTCGTCCGCCGCCAGCCTCCCTCGCTGAAGAAGAGAATAGAGATGAGAAGGACGAGAGAAGAGAAAAAAAGTGCAACTGACATGACATGTAGGTCTCACGCACTTTTTTTTCCTGACTAGGATGCCATGTAAGTAAAACCACCCATATATTCTATCATAGGCATGTTGAGTGCATGGTTTGTGTGCAGTTTAGGGTGCATATTTTTAAATTTGTGGTTAAGGAATCTCAAAAAAGAAAAGAATAAGTCCACTTTGACTCCCTTAAAAGTGACCCGAATCTAATCCATGACCCTAAACCGTAAAACTGGGTATGTCGACCCCCAAACTATTGAAACCGGTGCAATTTGACTCCCTTGGTGGTTTTAGAGGGCGGTTTTGGTGACGTGGCGCTGACGTGGCAGTGTTGACCTGGTCTATAGGGTTGACGTGGCGCTTAGATGGCATTTGAATTAAAAACACATATGTGGGACCCGTTTGGCATTCACACACAAAAAAAATGTGGGGTCCACATGTCATCATCTCTCTCTTTATTCTTCCTCCCCTCTTCCTCCGTTCTCTCTTTCTTTCTCTTTCTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGGAAGTGGTCTTCTGATGATCAGGACCTTCCTATCTCTGCTGGATCTTTCTTCGTGATGGATGATGCTGGACACCGTGGAAAGAGAAGAAAGAAGTCATTTTCAGATCAAGAAGCATCTTCAGAGGAGTCGAATGAGCAAAGCAGCTCCGCCCATGACAATAGCCAAGCTATCATAACAGGTTCCCCGACAGGTACTTCACACAATCTTCAAGTTGGCCTCTTATCCACCAAATCTATGAGGAGGGAGTTGCGTAAGCAGAAGCGCCTTGCTGCTGAGAAAGCTTGTGATATTGTGGGCGACCAATGCTTCTTGAAAAGGATGTAGCTACCTTGCTCAACTGCAAGACAGGAAATCTAGCCTGCAGCAGTAGAAACTCAAGCGGGGTAAGTTATTTCAAACATTCTTTGCCTTTGCAGTTTCTTAGTATTTCTTGAAGATAGCAACGCATGACATGCTTAGCATTTCTCACAGATAAATAAATTAAAGCAAACCTAAAAAATTAGGCATTTGACTAATTTCCATTCATTAGTTATGGTAACTTCTTCACTGTTGTAATGGAATTACAGTTCTCACAAACCAGGGATTCCAAACCGTATAATGCAAAGTGGTTGAATTCATTTCAAGCAAAACATAGACAGTGTATAGTTTCTTCTTTAAAAATTTGTAGTATTCTGCTGCAACCTCCAATGACTTTGTACGGCTAATTTTGCAGGCATTTCATTTGTTTCACACTTCTTGCCTTGTGCACTGGACTATTTTATGCCAATATGAGATGCTAGCAGACAAAATTGCAAGCAAGGGAAAAAGCAATCGAGGAAGAAAGGCAAAAAATGCACCTAAGAAAATAACATCCATCCTTTGCCCAGAATGCCAGGGTACTGGAATCCATGTTGAGGGAGATGAACTGGAAAAACCAACCATTTCTTTATCTGAGGTTCAGACTTCAGAGTGCTATTCTTCGCTGCTACTTTTCTTTAACTGGACCTGCTTCAATTATTTGTAGTGTTAAGTAATTGTCGACATCCTTAATTTTAGATCCGTATCGCAGATGTTTCGCTATAAGCTGAAAGCCATTGAAGCACACAAAGCATGGATGAAGAGCCCTGAGGTGCTTGAGAACTGTTCCACTGGACTTCATTTCCCTGCAGAGCAAATAGAGAACTCTGAGGTAGCTTCATAGGCTAGCATAATTAATACCCATTTTGTTTTGGATTAAACGCGTGATTGATCGAACCAACTTTTTTGCAGGAGCAGGAGGTGATTCCACTGAAGTCGGTTGCTTTCTATGCAGCTGACGGGTGAGATGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGGTTGATTCTAACAATTTCAGCGTATTCCAGAACTCAAATGCTGCGTTTTTGGTGTTTCGCTAGTTTGTACTACCGAAAACGGCTGTTAGAAGTTGTACGCAGAAGAGACGACATCGGATCACTGAACACTGAGTAGAATGTCACATTTTATTTTACTAAGATAAAAGCTCACAATCTGTTTATAGGTGGTTGGCGTCAATTTTGTACAAATATCCCATTTAACAGAAGCATAATCACAGTTTACACAGTATGGGCCTTTTGTTTTCAGGTATGAGATCGAGAACTGTGTTTTATTTCGAAATCGCTTTTAGAATCATGTACTCCTAGCAAATTGATCCCTTTCAAGAAAGCCCTGTTTGAACAAGGTGGCCTTTTCCTAGAACTGTAATCAAGTTACGAAAATCTCTCCCAAAAACCATGAAAAAATTCAGAAGAGAAGAAAAAAAGAAAAGGGCAAAGTTACCGCAACTTGGATCTCAGCAAGATAATTGTGTCATCAGGAGGCCATGGCCATGATAGCAACAGCCTCACATGTAATCAGGAAGATAACGCAGTATTTCTTGAAAAGCATCATCGATCCACTTGATTCACCCAACTCACACACAAACCACAAAAATCACATAAAAAACAACAATAACCAAAAAAACCCAGATGTATCAACTACTGCTGACGGATTTCAGATCACTACTCCTACACCTTACAGATCTGATCCTGCTGGATTGCTCAGAGAGATTCAGATACAAAAGGGGAAAAAAAACAGAGAGTCTCAGATCTACTTGCGGCGGCGAAGGCTCGGGAGGGGATGGAGGCTAGGGTTTCTGGCCATGCGAGTCCATTTCCCCATCAGGTGAACCCCTCCCCTTTTATAGCCTCACTCCCCCGACCCGCAGCCGCGCTCCCGGCGGCGCCGAGACCCCACCACCGCGTCTCGCTCAGAAAAGAAAAAAAAAAAGTCCAACTCGCCTAACGAGTGGGCCCGAAGCGGCCCAAATACCAGGAGACTTTCCGGCCCACCCGCCGCCCCGCCCGCCCCTTCTGGAATCTTCCGTCGCCTTCGCACCTCGTCACGGGAGGTAAAAAAGAAGAAGAAAAAAAACCTGAAAAAAAAAAAGGAAAGCAGAGGAAAACCCCAAGCCGCAAGCCCCCCCGCCGCGAGTCGTCTTCTCATCTCTCCTCCGCCGCCGCCGCCTGCTGCTGCATCTCTCGTCGTCGCCGGTGAGGGAAGGGAGGGGAGGGGGGAGGGCGTGATGGCGGCGGTGAGGGAGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGCAGCGTATGTGGTTGCTGAAGATATTGAGGCGATTGAAAAGGTTCTCGAGAAGGCCGATTCGTGCAATGATCTTATGACCTGGCACTCATACGCCACTATAGGCAAGGTTCTCATGCAATCTGGGATGGAAGAGAGGGCCTTGCAGGCTTTTCAAGAATCAGAGAAGAAGATTGCTAAGAAGAGTAATAGGGTCGCATATGGGTTTTTGCTCACCATGTATGCCGATCTAGGGATGAATAGTGAGGTGGACCGAATCTGGGATGTCTATAAATCCAAAGTGCCAGCATCGGCTTGCAACTCAATGTACATGTGCAGGATAAGTGTCCTACTTAAGATGAATGACATTGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATTCCCGGTTAATCAACTTACTGCTCACTGCTTACTGCAAAGAAGGTCTTATGGAGAAGGCAGAAGCTCTTGTAGATCAATTCGTCAAGAAAGGGAGGACGCCTTTTGGCAATACTTGGTATAAGTTGGCTGGTGGATATTTCAAGGTTGGTCAGGCGTCGAAGGCAGCAGATCTCACAAAGAAAGCACTTGCTTCTGCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCCTGAACTATTTCGCGGAGCAAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTACAGAGATTGGTTACTCCAACAAGGGACATTTACCATGGGTTACTGAAGACATATGTCAATGCAGGAAAACCAGTGTCAGACTTGCTTCGTCGTATGAAAAAAGATGGTATGGAGGCTGATGAGGAGACAGAGAAAATCCTTGCGGGAGAAGTCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033223