BGIOSGA033233

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Revision as of 05:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033233| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033233, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA033233

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033233, complete gene.

LocusTag

OS10G0503500

Ensembl Transcript ID

BGIOSGA033233-TA

Ensembl Protein ID

BGIOSGA033233-PA

Length

4840

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18179649..18184488

Sequence Coding Region

18179649..18179819,18179896..18179992,18180101..18180219,18180325..18180492,18180864..18180992
,18181227..18181287,18181384..18181487,18181561..18181644,18181744..18181850
,18181961..18182066,18182230..18182343,18182474..18182539,18183109..18183181
,18183262..18183348,18183436..18183490,18183579..18183650,18184043..18184105
,18184213..18184327,18184417..18184488

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18179649..18184488 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18179649..18184488 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCGTCACGCGGCGCGGCGGTCGTCGGCGCAGATCCGGCGGAGCGGGGTCATGTCGTCGTCGTCGTCGCCGGCGGCCCCCGCTGCCGCGGCCGGCGCCGCGGTTCCCGGCCCCTGCATCGTCCACAAGCGCGGCACCGACATCCTCCACGACCCATGGTTCAACAAGGACACGGCGTTCCCCATGACGGAGCGGGATCGCCTTGGCCTCCGCGGCCTCCTCCCGCCGCGGGTCATGTCGTTCGAGCAGCAGTACGACCGCTTCATAAACTCGTTCAGGTCGCTGGAGCACAACACCCGGGGAGAGCCCGACACCATCGTCGCGCTGGCCAAGTGGAGGATCCTCAACAGGCTGCACGACCGGAACGAGACGCTGTACTACAGAGTTCTAATTGACAATATCAAGGATTTCGCGCCGATAATATACACTCCGACTGTTGGGTTGGTCTGCGAGAATTACAGTGGCTTGTTCAGGCGCCCCCGTGGGATGTATTTCAGCGCCAAGGATAAGGGGGAGATGATGTCGATGATTTACAACTGGCCAGCCGAGAAGGTTGACATGATAGTTGTGACTGATGGGAGCCGTATTCTAGGTCTAGGTGATCTTGGAGTTCAGGGCATAGGTATACCTATCGGTAAACTTGATGTTTATGTTGCCGCTGCTGGTATCAATCCACAAAAGGTTCTTCCAATTATGCTTGACGTTGGAACAAATAACACAAAGCTTCTAGAAGACAAGCTATATTTAGGACTGAGGCAACCTAGGCTGGAAGGAGAAGAATACTTGTCTGTTGTAGATGAATTCATGGAAGCTGTTCATGCACGTTGGCCGAAAGCAGTTGTGCAGTTTGAAGACTTCCAAATGAAATGGGCCTTTGAAACTCTTCAGAGGTATCGTAACCGATTTTGTATGTTCAATGATGACGTGCAGGGGACAGCAGGAGTTGCTCTAGCTGGCCTACTTGGAGCTGTGAGAGCACAAGGTCGACCCCTCTCTGATTTTACTAAGCAGAAGATAGTTGTGGTGGGAGCTGGAAGTGCTGGGATAGGTGTGCTTAATATGGCTAAACAGGCGATGCTAAGGATGCCAGGGATAAACAGGAGCGGGGAAGGGCATAATCAATTCTGGGTTCTGGACAAAGATGGACTTATTACCAAATCCAGAAAGGGCCTGGATCCTGCAGTTGCTCGCTATGCCAGAGGTTTTGGTCCTGAAGAGGTGCAAGATCTCCATGAGGGGGCTAGTCTTGTTGAAGTGGTCAGGAAAGTGAAGCCTCATGTGCTTTTAGGACTTTCTGGAGTTGGGGGCATATTTAATGAGGAGGTTCTCAAGGCTATGAAAGAATCCGATTCCCCTCGTCCTGCAATTTTTGCAATGTCCAACCCAACTACTAAAGCCGAATGTACTCCTGAAGATGTATTCAAATATGTTGGAGACAATGCAGTATTTGCCAGTGGAAGCCCTTTCAGTAATGTCACTTTAGGCAATGGTAGACAAGGGTACGCTAATCAAGCAAACAACATGTATCTGTTTCCTGGTATCGGTTTAGGAGCCCTTCTTTCAGGTGCTCGGCATATTACAGATGGCATGCTCCAATCAGCAGCTGAGTGCCTTGCGTCATACATCACAGACGATGAAATTCGAAAAGGCATCCTCTTTCCATCAATCTCAAGTATCAGGCACATCACCGCACGTGTCGGCGCCGCAGTCGTCCGTGCCGCTGTTGATGAAGATCTGGCCGAGGGGCGCTGTGATGTAGACGCTAGGGACCTCAAGAGCATGACTGAGGCGGACACAGTCGACTTTGTGGCTCGGAAGATGTGGTACCCTATTTACAGCCCCCTCGTGAACGATAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MWRHAARRSSAQIRRSGVMSSSSSPAAPAAAAGAAVPGPCIVHKRGTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPDTIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARWPKAVVQFEDFQMKWAFETLQRYRNRFCMFNDDVQGTAGVALAGLLGAVRAQGRPLSDFTKQKIVVVGAGSAGIGVLNMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKGLDPAVARYARGFGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAMSNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGALLSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITARVGAAVVRAAVDEDLAEGRCDVDARDLKSMTEADTVDFVARKMWYPIYSPLVNDK</aaseq>

Gene Sequence

<dnaseqindica>1..171#248..344#453..571#677..844#1216..1344#1579..1639#1736..1839#1913..1996#2096..2202#2313..2418#2582..2695#2826..2891#3461..3533#3614..3700#3788..3842#3931..4002#4395..4457#4565..4679#4769..4840#ATGTGGCGTCACGCGGCGCGGCGGTCGTCGGCGCAGATCCGGCGGAGCGGGGTCATGTCGTCGTCGTCGTCGCCGGCGGCCCCCGCTGCCGCGGCCGGCGCCGCGGTTCCCGGCCCCTGCATCGTCCACAAGCGCGGCACCGACATCCTCCACGACCCATGGTTCAACAAGGTACCCGATCTCGCGATCTGCATGCCTCGCTCTCGCGCGCTGGGGCTCTCACGATTTCGTTTCTGGCACACCGCAGGACACGGCGTTCCCCATGACGGAGCGGGATCGCCTTGGCCTCCGCGGCCTCCTCCCGCCGCGGGTCATGTCGTTCGAGCAGCAGTACGACCGCTTCAGTGAGTCTACCCCGTCCACTTCGCCGAATTTTCGCCCGCGAGATCACCTGATATCTGCTGCTTTGTCTAATGTGGCGTGTGATGCGCTTGCCGCTTGCTGTGTTGCAGTAAACTCGTTCAGGTCGCTGGAGCACAACACCCGGGGAGAGCCCGACACCATCGTCGCGCTGGCCAAGTGGAGGATCCTCAACAGGCTGCACGACCGGAACGAGACGCTGTACTACAGAGTGAGCGCGCTCTCTCGATGTTGCAGTGGCGATGGTTGATTCATGAGCTCAAGGTGTTTGCGTGTTTGATTGTCTGATGCGGTGGTGTTCGTCTGTTTTTGCCAGGTTCTAATTGACAATATCAAGGATTTCGCGCCGATAATATACACTCCGACTGTTGGGTTGGTCTGCGAGAATTACAGTGGCTTGTTCAGGCGCCCCCGTGGGATGTATTTCAGCGCCAAGGATAAGGGGGAGATGATGTCGATGATTTACAACTGGCCAGCCGAGAAGGTACACCTGAGTACTTGACTGTTATAGAATAACAATTTATTTGGACACCGATGTTCTTACTAGTATATCAAAGAAAGAGATTGATCAAGATCGAAATTCAATCAATGAGATATGAAATCAAACAAATGTGTGCTGATTACTGTGCAAATGCTTGCGATTTTCCAGAGATAGGCTGCATACTGAATGCTAATAGGCAATTGTACAATAATCTACGCTTAAACCAATAGTCAGCTTTCATCCATGTCGTACACCATTTTATGCTTGTTGCTATATAAATATTTCTACAAACCATTGAAACTTCATGCAGCATAATTGGTTCCATTTCTGCTTGTGTTGAACCTCTGCATCTGATTGGCCGTTGCTTATTTCAGGTTGACATGATAGTTGTGACTGATGGGAGCCGTATTCTAGGTCTAGGTGATCTTGGAGTTCAGGGCATAGGTATACCTATCGGTAAACTTGATGTTTATGTTGCCGCTGCTGGTATCAATCCACAAAAGGTTTGTAATATACTCTTCCCATCTGGCACAGTAAGAGAAATGACCACGAAGAAATATGTTTCCACACATTGTTCCAACAAGACATAACAGCCAAGAGAAATGACCATGAAGAAATATGTTTCCATACATTTTTCCAACAAGACATAACAGCCAGTAGCACAGAAAAAAAATCAATAATATACTGTTATTTTTCATTTATCCTTTTCTCAACCTTTTCCCACTTCTGGTATGTAGGTTCTTCCAATTATGCTTGACGTTGGAACAAATAACACAAAGCTTCTAGAAGACAAGCTATGTGCGTAAGATACTACATCACACAACTTCTCAAACTCTTTCACTACTTTGGAGTAAATTCCTGTATCATAACTTAACTTACCAAGTATTTCCTTAGATTTAGGACTGAGGCAACCTAGGCTGGAAGGAGAAGAATACTTGTCTGTTGTAGATGAATTCATGGAAGCTGTTCATGCACGTTGGCCGAAAGCAGTTGTGCAGGTTCGTGCTCTTTCTGGTAATGTTTTGTTACCTAACCAAGTGATGCACCATTACTGAAGTTGTAAAGTTACAGTTTGAAGACTTCCAAATGAAATGGGCCTTTGAAACTCTTCAGAGGTATCGTAACCGATTTTGTATGTTCAATGATGACGTGCAGGTATTTTGATTGCCTGACTAGCTATTCTGTGTCTTTTAGCATGGATTATTGCCTTCCCAACTTCATATTATTGTTTGTTGCGCTTGTCATATCCAATAGGGGACAGCAGGAGTTGCTCTAGCTGGCCTACTTGGAGCTGTGAGAGCACAAGGTCGACCCCTCTCTGATTTTACTAAGCAGAAGATAGTTGTGGTGGGAGCTGGAAGGTATATGATTATGTTTGATATGCTTGCACTTTTCTATCAGATTTATTTCATACAAGGTATTTCTTGTCAAAAGTCTGTTTCCTCCGTTCTAATTCCTCTTTAGAATCCAGTGCTGGGATAGGTGTGCTTAATATGGCTAAACAGGCGATGCTAAGGATGCCAGGGATAAACAGGAGCGGGGAAGGGCATAATCAATTCTGGGTTCTGGACAAAGATGTAAGCTATTTTATGCAAGAAAATATCAACTTCTCTTTTCCAATATATATCTTCTGCCATACATGTGTTCAATTGCAATTCTGGGGCAAGCTTTATAAAGTCCTGTTTTTACATGAATAATAGGTTTGCTTCTTATTTTCCACTGTTATGCTGTACCATGCAGGGACTTATTACCAAATCCAGAAAGGGCCTGGATCCTGCAGTTGCTCGCTATGCCAGAGGTTTTGGTCCTGAAGAGGTGCAAGATCTCCATGAGGGGGCTAGTCTTGTTGAAGTGGTATAAAAATGATTCTAGGATTGTTTTTTTCCCCTCAGCTGCTGGAGCTAAAATATTTTATTGTAACAGAAGATTTTCCAGTGCTTCTGTGCTTGTGCTTGAACTAATTCAGCTTTATACTGATCATCAGGTCAGGAAAGTGAAGCCTCATGTGCTTTTAGGACTTTCTGGAGTTGGGGGCATATTTAATGAGGAGGTAAGAATCAACAATTCCTAACATGTTGATTTCATAATTTTACCCCAAAAAAAAGTTGAAGAATGGTCCTCACTTATAAATATGACTAGTCAGACTAGGGACTTTTCAGTGCAGTAAATAATCCATCTAAAAAAAGTGGCTCCCATGTTAGTTCCCCGCAACTTCTAGATGTATTTCACAGTACCAGTAATATTTATATGTTCAATATAGCAATAGCCAGTACACCCTTTCAAATCTGATGCTAGTGATTGGTAGCACATTGAGTTAGAATATTTTCTCCAACCTTATAAAGGATTTTGTGAGGTTTACATTAATGGGCCATTTCTATACTGTTTTAGTTTGCTTCATTATGATTTGTGAGTAAACTATGGTTACAAGAGCATCAAATATGTATTTGTGTTGTTAGGTTTCAAAAGTTCTCTCCTTTGCAAATGTAATAATATTAAGCCGGCTTGTTGCGAAGTGCTAAATCATGATCCTAGTGGATTTCATCTGTTAGGGTATACTCATATGTTCTCTCTTATAAATTTCAACATTGGAGTCTTAACTTTATCTTTGTACCTCTGCAGGTTCTCAAGGCTATGAAAGAATCCGATTCCCCTCGTCCTGCAATTTTTGCAATGTCCAACCCAACTACTAAAGGTTCCTCACCTCACCCATTAATATTTACTTCTAGGATACCCAAACATAAATGCCTGATATTTATATTTTTCTTATTACAGCCGAATGTACTCCTGAAGATGTATTCAAATATGTTGGAGACAATGCAGTATTTGCCAGTGGAAGCCCTTTCAGTAATGTCACTTTAGGTATGCCCTATTTAACATTCTCTATATCATTTCATTTTGCTAGCACTTTTGCATAAGACCACTTATTTTATAATGTGGTTGTCCCAGGCAATGGTAGACAAGGGTACGCTAATCAAGCAAACAACATGTATCTGTTTCCTGGGTATGACAACTGTTATAGCTTACCTTGAAATGCTTGTTTTTTTTCCTTTTTTATATGTTATTCTGATGGACGTTTCTATATAATTCAGTATCGGTTTAGGAGCCCTTCTTTCAGGTGCTCGGCATATTACAGATGGCATGCTCCAATCAGCAGCTGAGTGGTAAGTTTTATTCTGTTGTTTGATCGGATCATATTTTCGCTTGTTGTCTTGTAGCTCTATTTCTTAAGATCTCAACTGCACTAACAAGTACAATTACTGATGTCCAGCATATTAGACAGTGTGACGTAAAAAGCTTACACGCTTCAGCCGTACTTTTTGACAAAGTAGTGTTTTCTCCACCTTAAATTGCACAATTTCTATAATTAATGTATCTTGGATGGTTTGTATGATTTGTTTTTTTTTCCTGGTAAATTGAGGGTGTGTGTTCACGCCAAAATTGGAAGTTTGGTTGAAATTAGAACGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAGTTTGGAACTAAACTCGGCTTGAGCTATGCATCTAATCTAGTGATTTCTGATGCAGCCTTGCGTCATACATCACAGACGATGAAATTCGAAAAGGCATCCTCTTTCCATCAATCTCAAGGTTAGCTCTTCCATCCAACCTGCGCCATTGCAGACTGATAGGCAGCATGATACCATAATCCAACCATTCCACTATTGCTAATCAACATACCACCATGAAAAATGCAGTATCAGGCACATCACCGCACGTGTCGGCGCCGCAGTCGTCCGTGCCGCTGTTGATGAAGATCTGGCCGAGGGGCGCTGTGATGTAGACGCTAGGGACCTCAAGAGCATGACTGAGGTACTGCATCATACATAATTTCAAATCCCTGAAGTTGAATTTTTTGCCAGTTTGGCGTCTGAAATGTGTCATTTTACATGTGTGCACAGGCGGACACAGTCGACTTTGTGGCTCGGAAGATGTGGTACCCTATTTACAGCCCCCTCGTGAACGATAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033233