BGIOSGA033242

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Revision as of 05:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033242| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033242, complete gene.| tag = OsI_342...")
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Gene Name

BGIOSGA033242

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033242, complete gene.

LocusTag

OsI_34248

Ensembl Transcript ID

BGIOSGA033242-TA

Ensembl Protein ID

BGIOSGA033242-PA

Length

5291

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18325139..18330429

Sequence Coding Region

18325139..18325466,18326666..18327456,18328900..18328941,18329245..18329409,18329514..18329693
,18329946..18330113,18330199..18330429

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18325139..18330429 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18325139..18330429 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAGGAGGTGGCTGCCCGCGAGGACCTCCGGCGAGGGCCGGGGAAGAGGACCCGCTCGACGAGAGGAGGACGCGGCCGCCAGTGACGAGCCACTGCGCGGTGAGCTCGAGGACATTGTCTGGGTCGCGTCGAGGCAATGGTGCGTCGCGGCCGAGCCGGTGGCAGGGGAGACATCGACGAAGAGAGGGAGGGCGGCTGCGGCCAGAGCTACGGGAGGGGCGGCTGCGGCCGGAGCTACGGGAGGGGCAGCGGCGGTAGTAGCCGGAGCTGGGAAAGGGAGCGGCGGCGGCAGTCGGAGCCATGGGAGGGAGGGGCGCAGCGGTGACTCCGGCCGGGAGCGGCGCGACTGCGTGTGGCTCGGCACGTTTACCGGCGAGGCCGAGGCGGGGCACGCCTACGATGTTGCGGCACAGCAGTTCCACGGCCGTGACACAGTCACCAAACTTCCGCCCCTCGTCAAGTCTGACTCGAAGGCTGCCGTCGAGCTCTGTTTCTTCGCCTCCCGGTCAAAGGCCGAGGTCATCGACATGCTCCGCAAGCACACCTACCTCAAGGAGCTCGTTGTTGAGCTCGCGACGACGTGGCGGCGGCGGCAGCAGGGCGAGCTCGTGGCAGGAGCGCCCGTCGCGGTGGCGACGGCGGTGCGAGGCCCGCGGCGGCGGCGGCGTCAGTCGTTGGCAGGAGCTCCTAGAGGTGGTGCTGTCGGCGGCGGTGGCTGCCGACGGCGGCCGCGGTATCCGGAGCGTCCACGGCGGCTCACGGCCGGTCTGGGTGTGGCCGGGTGTTGGTCAGCTAGCAACGTCTATTGGCGACAGCGGCGGCGGTGTGGTCGTGGCAGTTGGCGGCAGCGGTTGCTGGCTGCTTGGTGGTGGAGGGCGACGGCGCAGCGGCGGTTTGCGGAGGCGGTGGCTCGCGTCGGTGGCAGCGGCGACGGCGGCCATGACTGTGGAGGCGGTGGCGATGTCGGCAGCGGGGATGGTGACGGCGAGGTGGCTGAGCGTTCGGCAGCAGCGGCTGCGGTGGTGGTGACCGTGTCTGCGGTCATCAGAGGCATGGCGGCCTCGGACGGCTTGCCGAGGGCGTGGGAGACGGCTGCAACTGGCCGGCGCGGCATCGACATATGGTCGAGTTTTACTGATCCACGTACCGCACACCAGGCTGTTCGTACCATTGGTTTTATTGAGGTTGGTAACAAATCTCTTGTATGGGATAAGGATATTGGTCCTGGCGAGGATTTAGAACAATTTATCCTAAAATTCCCAATTACAAAATCATTGGTTGTTCCAAACGCACAGCTTAAATTCGTTATTGAGAAAAAACTTAACATTGGCTGTTGGTTTAATGGGCGTATTGTTCCTGAGTTGATTTGGGGACTAAATTATGCCCTGGATGAATTTGTGCCTCAAGAGAAGGGCAACCTATCAAATGAATGCCATTTTCCACTGAGCAAGCAATTGCATGAGCAGTTAAAAGCATATGGATTTAGTATCTCACCACAATTAATTAACAGAGAGTTTATAACCAGTTTTGGTTACTTAAATTATCTGGAACGTACTTCAAAGAACATTTCCAGGGATTTACACCAGAAATTTGATCGTTTCTTTTGTGGACTTGAGATGTCTGAGAGAGTGTTTGTAAAAGTTGTTGCAGACCGTCTCCGTTCCATGGAGGAAGTGGCATCAACACCAGGCAGACGAGAGGCATTGAGCAACGCTGAATTTCTTTTGACGGTTCCTAAGAAGTATAACACATTATCTCGTCTTAAGCGTATGGAGGCAGAAATTATGGAGGCAGAAGTTAGGGGTTCAGGGCTTGGGCATCCTTGGGTTTGCGTAGCTGTTTTTGCAGTGGCCTTAGGGGTTATGGAAGGATTGCGAATTGCAATGAAGCGAGCAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MRRRWLPARTSGEGRGRGPARREEDAAASDEPLRGELEDIVWVASRQWCVAAEPVAGETSTKRGRAAAARATGGAAAAGATGGAAAVVAGAGKGSGGGSRSHGREGRSGDSGRERRDCVWLGTFTGEAEAGHAYDVAAQQFHGRDTVTKLPPLVKSDSKAAVELCFFASRSKAEVIDMLRKHTYLKELVVELATTWRRRQQGELVAGAPVAVATAVRGPRRRRRQSLAGAPRGGAVGGGGCRRRPRYPERPRRLTAGLGVAGCWSASNVYWRQRRRCGRGSWRQRLLAAWWWRATAQRRFAEAVARVGGSGDGGHDCGGGGDVGSGDGDGEVAERSAAAAAVVVTVSAVIRGMAASDGLPRAWETAATGRRGIDIWSSFTDPRTAHQAVRTIGFIEVGNKSLVWDKDIGPGEDLEQFILKFPITKSLVVPNAQLKFVIEKKLNIGCWFNGRIVPELIWGLNYALDEFVPQEKGNLSNECHFPLSKQLHEQLKAYGFSISPQLINREFITSFGYLNYLERTSKNISRDLHQKFDRFFCGLEMSERVFVKVVADRLRSMEEVASTPGRREALSNAEFLLTVPKKYNTLSRLKRMEAEIMEAEVRGSGLGHPWVCVAVFAVALGVMEGLRIAMKRAN</aaseq>

Gene Sequence

<dnaseqindica>1..328#1528..2318#3762..3803#4107..4271#4376..4555#4808..4975#5061..5291#ATGAGGAGGAGGTGGCTGCCCGCGAGGACCTCCGGCGAGGGCCGGGGAAGAGGACCCGCTCGACGAGAGGAGGACGCGGCCGCCAGTGACGAGCCACTGCGCGGTGAGCTCGAGGACATTGTCTGGGTCGCGTCGAGGCAATGGTGCGTCGCGGCCGAGCCGGTGGCAGGGGAGACATCGACGAAGAGAGGGAGGGCGGCTGCGGCCAGAGCTACGGGAGGGGCGGCTGCGGCCGGAGCTACGGGAGGGGCAGCGGCGGTAGTAGCCGGAGCTGGGAAAGGGAGCGGCGGCGGCAGTCGGAGCCATGGGAGGGAGGGGCGCAGCGGTGGTAGCCGGAGCCAGGGGAGGGAGGGGCGGCGATGGTTGGAGTTACGGGAGGAAGGGGCAGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGAAAGTAATGTGTAAAAGTTCTGATATGAATGTTGCGATGCTGAATACAATTCATATCGGAAGTCTTTTAAGGCATCACCCAAAGCTAACTGGCTACCTGCTGAAAGTTTCTTTTCATCCTGTTGGAAATCGCCTAATAGAAAGTTTCACCGTTGAATGTCTCCTAGTAGAAAGTTTTACCATGGGAAGTCTCCTAATAGAAAGTTTCACTGTTGAAAGTCTCCTAACAGAAAATTTTCTTCTCCATATAAAATGCATTTTTTAACTTTGATGGAAATCTGCTTCTACTCTTTTCAGAACCCTAAGTGAAATTGATTGATTACACACTAAGAAAAAGCAAAATAAATTATTTTCCATGCAAGCCAAGCAGTGAATTTGTGGTATTACAAAAAATCCCAGTGGCTTACTGGGTTTGAATGCAAACAAAAAAAAAGGGTATCATGAACTTTAGCTTGCAACAAGAGGAAAATGATAAGAGTCTCGCTCATGCAAACACTCACATCACGTACCATATTTTTATTCAATCCATTATATTTCGCATATTTATACTTACAACATAAGTTGATAAAGTCTTTTAGTGCTTGTGGAAGGTTGGGGACTCCCTCATTATAGTATGCGTAAAGTGCATAGCCGGTCCCTAAACTTGTACGGCTGTGTCATTTGGAGTCCTCAAACTCTCAAAATGCATATATCCAAATCCCAAAACTTGTTAAATTGTGTCAATCCGATCCCAAACTGCCATGACACCTCCAGGATCCTACATGGCATGCCACACGGACGATGATGTGGCAGCATCACAAATTCTACACCAACTGACAAGTGGGCCCCAATAAAAAACTTTTTTTTAATACCCTTTTCTGTTCATTCCCATCTTGTCCTTTCTTCGTTTCTCCTCTTTTCTTCCTACTGCATTGACCGTAGCCATGGCCTCTGGTCGAGCTGCCTCTTCGATGACATGAACAGCGGTGCGTCCATGGGCGAGAAGGCACCGGCGCGACAGCCGCGTCGACGGAGACGCTGCAGCGTGTGGGCAGCGGTGCCAGCGCGGTGATGGACGCGGTTGTGTCCTGGGCATCGAGGAGACTCCGGCCGGGAGCGGCGCGACTGCGTGTGGCTCGGCACGTTTACCGGCGAGGCCGAGGCGGGGCACGCCTACGATGTTGCGGCACAGCAGTTCCACGGCCGTGACACAGTCACCAAACTTCCGCCCCTCGTCAAGTCTGACTCGAAGGCTGCCGTCGAGCTCTGTTTCTTCGCCTCCCGGTCAAAGGCCGAGGTCATCGACATGCTCCGCAAGCACACCTACCTCAAGGAGCTCGTTGTTGAGCTCGCGACGACGTGGCGGCGGCGGCAGCAGGGCGAGCTCGTGGCAGGAGCGCCCGTCGCGGTGGCGACGGCGGTGCGAGGCCCGCGGCGGCGGCGGCGTCAGTCGTTGGCAGGAGCTCCTAGAGGTGGTGCTGTCGGCGGCGGTGGCTGCCGACGGCGGCCGCGGTATCCGGAGCGTCCACGGCGGCTCACGGCCGGTCTGGGTGTGGCCGGGTGTTGGTCAGCTAGCAACGTCTATTGGCGACAGCGGCGGCGGTGTGGTCGTGGCAGTTGGCGGCAGCGGTTGCTGGCTGCTTGGTGGTGGAGGGCGACGGCGCAGCGGCGGTTTGCGGAGGCGGTGGCTCGCGTCGGTGGCAGCGGCGACGGCGGCCATGACTGTGGAGGCGGTGGCGATGTCGGCAGCGGGGATGGTGACGGCGAGGTGGCTGAGCGTTCGGCAGCAGCGGCTGCGGTGGTGGTGACCGTGTCTGCGGTCATCAGAGGCATGGCGGCCTCGGACGGCTTGCCGAGGGCGTGGGAGACGGCTGCAACTGGCCGGCGCGGCATCGTTTGGTGGAGGGGTCGGAGACCGGCTTGGCGTAGAGAAGCGCAGCCGATGGCAGCGGAGGCTGGCTCGGCATGAGAGGCGCGGGCGGCGGAGATGGAGGCCGGCTTGGCGCGAGAGGCGCGGCCGATGGAGGGAGGCCGGATTGGCGCGGGAGACGCGTCCGGCAGAGGAGGCTGGCCTGGCGCAGATAGGTGCGGCCGGCGGTGGAGGAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCTGATACCTAACATGTATCAGGTATAACCATCAAGTATCAAGCAATTCCTACCATGTATCAGGTGATACTTGCGAGGTATCAGATGATATCTATCAGGTATCATGCGATTCTTACCACGTATCAGGTGATTACTTCCGAGGTATCAGATGATACCTATCAGGTATCATGCGATTCATACCACATAGAGGGTGATACTTGCAAGGTATCGGGTCCTGATACTGTATCCGATATCGGGTGATACCTACCAGGTATCGTGCGATTCTCCCACGTATCAGGTATCAGACGATTCTTATCACGTATCAGGCGATACTCGCAAGGTATCATGTGATACCTATCAGGTATCGCGCGATTTCTACGACGTATCGGGGTGATACTTGCGAGGTATCATATGATACCTACTAGATATCAGGAGCTGGGCATCGAGGCGTCGTTGCCGGCGGCCGCGTCCTCCCCCGTCCACGCTCCACACCGAACCCGAACCTCGTCGCCGGCAGCCGCATCCTCCCCCGTCCACGGTCCACATCGGAGCTCATCGCCGGCGACCGCATCCTCCGTCGGGAGCTCGTCACCGGCGGCCGCGTCCGTCGTCCACGCCTCAGCCGGCGGCCGCGTCCTCCACGCCGAAGCTCATCGCCGGTGCCGTCGCCATCACCACACAGGATCCTCCACCGTCCACACCCCACGTCAGAGCTCGTCGCCGGCGCCATCTTTATCACCAACAGGATCCTTTGCCGTCCATGCGACCATGCCCCACGCCGGAGCTCGCCGGCGGCCGCGTCCGCGCCGCTGGTGTCAGCCTCGTCTGCGCTACTCCCACGGAGGCCCACGCTCTCGCGTCTGAGGGAGGTGGAGAGGGAGCGATCCCGTCGGGACAGTATCCCAACGGGATTCCGTTATATAGCAGCCCCCTGAATCTAAATTACTAAATTTATAAAATCGCAACAAAACAGGCTAAATTACTAAATTACTTTGGTCTTATACTTGCAGAAAAAATGCATTTAGGACGATGCTGTTTGAAACCCCTTCGGGATTTGCAATGTTCCGTGTTTCAGATGTTTGTTTAGATATCCTGAGGTATGTATAACTTTTCATTCACCCTAGTGTGATGCATAATTCATTTTTCTTCTGTTACATTTAGGCCCTACACCTTATCTGATTTTCCTTTCCTTTTGTAGGACATATGGTCGAGTTTTACTGATCCACGTACCGCACACCAGGTACATTTTAACTCCTAAATTTTCTTTCATGCTTTTTGTTTGTTTATATCTATTTATCGATTTATTGTTTTTTGCACCTTTACTATCTATGTACATCCTAACCATTACTGTTTTATTTTTTTTTTGCACCTTTACTGTAAAAGTACATCCTAAGCCAACTAATTATTGCTTTATTATTTTTTGCATCTTAACTGTAAATGTAAATCCTAAGCCTTTAAATGTGTTTCATACAATTCTATTTGTATGTCATTTGTTCTCTTGGTTTTATTAAGATCCTAAGCCTTTAAATGCATCTATTTGTAGGCTGTTCGTACCATTGGTTTTATTGAGGTTGGTAACAAATCTCTTGTATGGGATAAGGATATTGGTCCTGGCGAGGATTTAGAACAATTTATCCTAAAATTCCCAATTACAAAATCATTGGTTGTTCCAAACGCACAGCTTAAATTCGTTATTGAGAAAAAACTTGTAAGTTTACATTTACCCTAATGTATTTTAATGTTGATGTTTATTTAATTTTTTTGTTAGTGTGGAATTATTAATGTTTCCCTGTTATATATTTCTTTTTTCAGAACATTGGCTGTTGGTTTAATGGGCGTATTGTTCCTGAGTTGATTTGGGGACTAAATTATGCCCTGGATGAATTTGTGCCTCAAGAGAAGGGCAACCTATCAAATGAATGCCATTTTCCACTGAGCAAGCAATTGCATGAGCAGTTAAAAGCATATGGATTTAGTATCTCACCACAATTAGTATGTTTTCTCCTTTGCTAATATTGTTATTATTCTCTGCTGACCATCCTTTTATTGTTTTCTTCCTTGGTCTGTTGTGTTACCTTATTTATTTATTTATTGTTTTGTGTTACCTTATCCTTTTATTGTTTAATCCCTTAAAATATTTGCTACTGTACTATCTGTTGTGTTACCTTACCCATTATTGTTTAATCCCTTGCATATTGCTTGCTATTGTTGTGTTGCCTTATTATTTTATCCTTTTCATTTTAGATTAACAGAGAGTTTATAACCAGTTTTGGTTACTTAAATTATCTGGAACGTACTTCAAAGAACATTTCCAGGGATTTACACCAGAAATTTGATCGTTTCTTTTGTGGACTTGAGATGTCTGAGAGAGTGTTTGTAAAAGTTGTTGCAGACCGTCTCCGTTCCATGGAGGTCAGTAGATTTGCTAAAAGCAAATAGTACTAATAATTAAGTGGTGGCTACTGATGAAACAATTTATTTTCTTTGTTTTCTGTAGGAAGTGGCATCAACACCAGGCAGACGAGAGGCATTGAGCAACGCTGAATTTCTTTTGACGGTTCCTAAGAAGTATAACACATTATCTCGTCTTAAGCGTATGGAGGCAGAAATTATGGAGGCAGAAGTTAGGGGTTCAGGGCTTGGGCATCCTTGGGTTTGCGTAGCTGTTTTTGCAGTGGCCTTAGGGGTTATGGAAGGATTGCGAATTGCAATGAAGCGAGCAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033242