BGIOSGA033282

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Revision as of 05:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033282| Description = Aldose reductase| Definition = Oryza sativa Indica Group BGIOSGA033282, complete gene.| tag = ALR2| tid = BGIOSGA033...")
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Gene Name

BGIOSGA033282

Description

Aldose reductase

Definition

Oryza sativa Indica Group BGIOSGA033282, complete gene.

LocusTag

ALR2

Ensembl Transcript ID

BGIOSGA033282-TA

Ensembl Protein ID

BGIOSGA033282-PA

Length

3971

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18956685..18960655

Sequence Coding Region

18956685..18956831,18958829..18959057,18959170..18959263,18959446..18959569,18959750..18959851
,18959931..18960082,18960181..18960274,18960470..18960655

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18956685..18960655 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18956685..18960655 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTGCCGGTGACCACCAGGGCGGCGCCGGCGATGCCCTTCGCGCCACAGCCGCGCACCGCCGGCGGCGGCCTCCTCCGGCGACCGTCGCCGCCTGCCGCCGCGCTGCGCATCGCGCCGCCCCTCTTCTGGCCGTGGCAGAAGGTGAAAGTCGGTCCCCTTTCTGTTTCGCCTATGGGATTTGGAACATGGGCTTGGGGGAACCAGCTACTTTGGGGATATCAAGAAAGCATGGATACTGAACTTCAGGAGTGTTTCAATTTGGCTCTGAAGAATGGCATAAACCTTTTTGACACTGCTGACTCTTATGGAACTGGAAGGTTGAATGGTCAGAGCGAAAGGCTCCTCGGTAAATTTATCCGCGAGTATGAAGGGCCGATGAAGTCCCCTGATGATGTGATCATTGCAACCAAGTTTGCAGCATATCCTTGGCGGCTAACATCAGGCCAATTTGTCAGCGCCTGCAAGTCTTCTTTGGAAAGATTGCAGCTTGATCGGCTCGGGATAGGACAGCTGCATTGGTCTACTGCTAACTATGCACCTCTGCAGGAGCGTGCTCTTTGGGATGGTCTAGTTGAGATGTATGAAAAGGGTTTGGTTCGTGCTGTCGGCGTCAGCAATTATGGGCCCAAGCAGCTTCTGAAGATCCACAGCCATCTATCATCTAGAGGTGTTCCATTGAGCTCAGCTCAGGTTCAGTTCTCACTACTGAGCATGGGGGATGAGCAGATGGAGCTGAAAACTGTGTGTGATTCTTTGGGCATTCGTCTGATTGCTTATAGTCCACTTGGATTAGGAATGCTGACAGGAAAGTATACTACTTCTAACCTTCCAAGTGGACCAAGGTCTGTGTTGTTCCGGCAAATTCTTCCTGGGTTGGAATCTCTGCTGACTTGTCTGAAAAGAATTGCAGAAAGGAAGGGGAAGACCATGTCTCAAGTGGCCATAAATTGGTGCATCTGCAAGGGCACAATTCCTATTCCAGGTGTCAAAACAGTCAGGCACGTCGAGGATAACTTGGGAGCACTGGGCTGGAGGCTTAGCCCTGCTGAAGTTTCAGAGCTCGAAGCTGCAGCAATGGAGTCTCCGAAGAGAATGGTCCAGAACATATTCCAAACTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MALPVTTRAAPAMPFAPQPRTAGGGLLRRPSPPAAALRIAPPLFWPWQKVKVGPLSVSPMGFGTWAWGNQLLWGYQESMDTELQECFNLALKNGINLFDTADSYGTGRLNGQSERLLGKFIREYEGPMKSPDDVIIATKFAAYPWRLTSGQFVSACKSSLERLQLDRLGIGQLHWSTANYAPLQERALWDGLVEMYEKGLVRAVGVSNYGPKQLLKIHSHLSSRGVPLSSAQVQFSLLSMGDEQMELKTVCDSLGIRLIAYSPLGLGMLTGKYTTSNLPSGPRSVLFRQILPGLESLLTCLKRIAERKGKTMSQVAINWCICKGTIPIPGVKTVRHVEDNLGALGWRLSPAEVSELEAAAMESPKRMVQNIFQTA</aaseq>

Gene Sequence

<dnaseqindica>1..147#2145..2373#2486..2579#2762..2885#3066..3167#3247..3398#3497..3590#3786..3971#ATGGCTCTGCCGGTGACCACCAGGGCGGCGCCGGCGATGCCCTTCGCGCCACAGCCGCGCACCGCCGGCGGCGGCCTCCTCCGGCGACCGTCGCCGCCTGCCGCCGCGCTGCGCATCGCGCCGCCCCTCTTCTGGCCGTGGCAGAAGGTCCCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAACAAAAAGTTAGAAAAAATTTTGTATAAAAAACTTGAATTCAAATTTAAATTTGAATCGGGTATGTAAACTTTGACTTATAAATTTTTGGTCTATAAACTTTAGGTGTATAAACTTTATATGTATAGAAATACTATATATAGAAAATATTTCAAATTCAAATTTGAATCGGGTATGTAAACTTTAGATATATAGAAATACTATATATGAAAAATATTTGAATTCAAATTTAAATTTGAATCGGATATATAAACTTTAGGTCTATAAACTTTAGATGTATAGAAATACTATATATAAAAAAATATTTGAATTCAAATTTGAATCGGATATATAAACTTTTGACTTATAAACTTTTGGTCTCTAAACTTTATATGTGTAAACTTGATGTGTATAAATTTTAGGTGTATAAATTTATTAAAATAGAAAATTAATGCGGTGCTAGAAAAGGAAACAGGTGGATGGTGGGGGGCTCTGAGCGAGCTATTGCCCAGTAGCACTTCCGGAACAATTTTAGCCCAGGTTCCAACAGGGCCTACCTTTGCACGGCAAAAACGTTGAATCACCTCGCAAGTACGCAACGCCACGAGGGGATTTTTATCAAGAGATTTAACGGACGAGAACGCGCCGCCCAAATTCCGCGCCTCGTCGACCTCGGCTCCGGCCACCGATCGATGGCTCTGCCGGTGACCACCAGGGCGGCGCCGGCGATGCCCTTCGCGCCACAGCCGCGCACCGCCGGCGGCGGCCTCCTCCGGCGACCGTCGCCGCCTGCCGCCGCGCTGCGCATCGCGCCGCCCCTCTTCTGGCCGTGGCAGAAGGTCCCATTCGCAACAAACCCCTCTTGATACCTGCATGATTACACTAGTTAAATTAGTCTAGTTCAAATTCTGCTGCACTTCTTGGAGATTTGCACGGCCAGTTCGTGTGCTGTGAAAGCTTAACTCTACCGTGTTGTCTTCTTAATTAAGGAGGCAAACTGTTTTGGTGAGCTTGTAGCCATGTACAGTAGGACTCAAGCTGCAGTTTTTTTTATTTTCTTCTTCAAGACAGTACTGCTACTACATTCAAGGCTGGAACAGAGCCACAGTAGCTTTTGCTCGGGAGGCCCTGCAGTAGGTTTACTGATTTTGTGACATGACATGAGCTAAATGTACTACAACTTTGCCATTAAACAAGAACGCAAAGTAAATGAGGCACCAGTACAAGCCTCATGTTCTGTCTGAATGTGCACAACTTTTACTGACCGTATATTTCGTGCCTCCTTGAGCACAAACCACAAGAAGGATCCGATGACCATGCTCTCTCTCCCCTACCATGGAGCTATCTCTAGCAAAGAACCAGGAATGTGATTAGATTAGTAGCACTGACAGTCTGCTCCTTTTTGGTAACCAGCTATGGATCAAACGAAAATTATTTGTTAATGTTTATCACTGATGCTTTCGTTCCTCTTTATCGAAGTCGAGCACGGAAACCCAAAAGTTCCACGCTGTGTGATTTCTGTTGGAAATAACGAGCTAGATGCATGGCACAAGTTTGCTGTTGTTGCCATGCATGGGCTGTGCTTATTTTACTCAAGATGACTGGAAAGCTACTGACATTGTGTTCGTAGACTAGAATTAGTTGATGCTATCTGACAAGAGGAAAAATCAAGAGCAGGATATTGGCCCAACAAGCTTTGTATTCGCCCCTAACCAAATTCTGTCGAACAACTGACACATTGAAATTCAGACTTTCTGAAAGTTTCAAGTAGGATCGGCATGCTAAGCCAAATTGTCAAATGTGCATCTTGTTGTGCTCATGTTTCAGTCTGAAGTATGAACCATAACATGTTACAGTTTCTGAAGAATTAAATGTTATCACTAGTACATGAAGTTTTCATTCATAATTGATCAGTGAAATCCTTTGAAGATTATATTTTTGTTGATAAATATAGGTGAAAGTCGGTCCCCTTTCTGTTTCGCCTATGGGATTTGGAACATGGGCTTGGGGGAACCAGCTACTTTGGGGATATCAAGAAAGCATGGATACTGAACTTCAGGAGTGTTTCAATTTGGCTCTGAAGAATGGCATAAACCTTTTTGACACTGCTGACTCTTATGGAACTGGAAGGTTGAATGGTCAGAGCGAAAGGCTCCTCGGTAAATTTATCCGCGAGTATGAAGGTTGGTTAGCCTAGCTAGTAATTCAGAATAATTTCTGAAATTATGGGATAGTGTTTCTTTGGGGGGAGTTTGTCTAGTTGAAATGACTTCATTTTCCCTTTTTGTATGACAGGGCCGATGAAGTCCCCTGATGATGTGATCATTGCAACCAAGTTTGCAGCATATCCTTGGCGGCTAACATCAGGCCAATTTGTCAGCGCCTGCAAGTATTCTTCCAATTTGTTTGCTTAATGTACATGAACCATATTTCAGCTTGTTCCGTGAAATTTTACTCCATCCACCAACCACGAATGTGCTGAAAAACATAGAGCTAACTGAATATTGAACATATAACTGATACCTATAGGCCTCTAGCGTTTAGGTGACTTACATCAGTGCCAATTTTCAGGTCTTCTTTGGAAAGATTGCAGCTTGATCGGCTCGGGATAGGACAGCTGCATTGGTCTACTGCTAACTATGCACCTCTGCAGGAGCGTGCTCTTTGGGATGGTCTAGTTGAGATGTATGAAAAGGTCACCAAACTTCCGATTGTATTGTCATTGTTCAATGTTCTGAATCCCAACTGTATATTCAGCTCTACAAACCATATATATCTCAGTTAGGTACACGGACAGATTCTTTGGATGAAGATATTGTCCTCCTTTACGTTCTTGATTTCTTAGAAATTTGACTGCAAAATGGATTTCTTGTAGGGTTTGGTTCGTGCTGTCGGCGTCAGCAATTATGGGCCCAAGCAGCTTCTGAAGATCCACAGCCATCTATCATCTAGAGGTGTTCCATTGAGCTCAGCTCAGGTACCTTCAGAATGCCCATACATCTTGTACAGTTGTACTCATTCAGTATAGCTGTAACTGAAATTGTCATGGAATGCAGGTTCAGTTCTCACTACTGAGCATGGGGGATGAGCAGATGGAGCTGAAAACTGTGTGTGATTCTTTGGGCATTCGTCTGATTGCTTATAGTCCACTTGGATTAGGAATGCTGACAGGAAAGTATACTACTTCTAACCTTCCAAGTGGACCAAGGTAACGACTAATGACCAAAGGAAGCAGACAAATATTTCTCTCTGAATTTTATGACAATTGATGACGGAAATTCAGTTCATTTGTTCTCTGGTCTGCAGGTCTGTGTTGTTCCGGCAAATTCTTCCTGGGTTGGAATCTCTGCTGACTTGTCTGAAAAGAATTGCAGAAAGGAAGGGGAAGACCATGTCTCAAGTAAGTATTGCTTTCCAAGAGCAAAATGACCTGCATAACAAGTGATTCATGCATAGATCTTGCCAATCTGGCTTCAAATTATCGGAACATTTCATCGTATGAGTGATAAGTTTATTTAGCTCGTTGCAATACCTGAATGCTTCAGAGATGCAACACATGAAGAAAACTGACGGTGACAGTGTGATCTGAACTCAGGTGGCCATAAATTGGTGCATCTGCAAGGGCACAATTCCTATTCCAGGTGTCAAAACAGTCAGGCACGTCGAGGATAACTTGGGAGCACTGGGCTGGAGGCTTAGCCCTGCTGAAGTTTCAGAGCTCGAAGCTGCAGCAATGGAGTCTCCGAAGAGAATGGTCCAGAACATATTCCAAACTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033282