BGIOSGA033302

From RiceWiki
Revision as of 05:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033302| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033302, complete gene.| tag = OS10G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033302

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033302, complete gene.

LocusTag

OS10G0523100

Ensembl Transcript ID

BGIOSGA033302-TA

Ensembl Protein ID

BGIOSGA033302-PA

Length

3527

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19259581..19263107

Sequence Coding Region

19259581..19259676,19259799..19259994,19260477..19260557,19260623..19260674,19260807..19260928
,19261736..19261836,19262009..19262067,19262167..19262223,19262602..19262647
,19262875..19262954,19263047..19263107

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19259581..19263107 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19259581..19263107 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGGCGGCGGCGGCGGGAATCGCCTGGACCTCCCCGTGGTGGACCTCGCGTCCTCCGACCCCCGAGCCGCCGCCGAGTCCATCCGAAAGGCGTGCGTGGAGTCCGGATTCTTCTACGTGGTCAACCATGGGGTGGAGGAGGGGTTGCTGAAGCGGTTGTTCGCGGAGAGCTCGAAGTTCTTCGAGCTGCCGATGGAGGAGAAGATGGCGCTGCGGAGGAACAGCAACCACCGGGGATACACCCCACCCTACGCCGAGAAGCTCGATCCCTCGTCCAAATTCGAAGGAGACCTCAAGGAAAGTTTCTATATTGGGCCCATTGGAGATGAAGGTTTGCAGAATGATGCTAACCAGTGGCCTTCTGAAGAGCGCTTACCAAGTTGGAGGGAGACAATTAAGATGTACCATGCAAGTGCACTGGCTACTGGCAAAAGGATACTCTCTCTAATTGCTCTGAGTTTGAATCTTGACGCTGAATTCTTTGAGAACATCGGTGCCTTCATCCGCCCATCAGCATTTCTTCGATTATTGCACTACCCAGGTGAAGTAGACGACTCTGATTATGGCAATTATGGTGCATCAGCTCACTCAGATTATGGAATGATAACCCTCCTAGCAACAGATGGCACTCCTGGGCTACAGATATGCAAGGAAAAGGATAGGAATCCCCAGCTCTGGGAAGATGTTCATCACATTGATGGGGCCCTGATTGTTAACATTGGCGATTTGCTAGAAAGGTGGACGAATTGTATTTACAGGTCTACAGTGCACCGTGTTGTTGCAGTTGGTAAAGAGCGATATTCTGCGGCTTTTTTTCTTGACCCAAACCCTGATTTAGTGGTTCAGTGTTTGAAAAGCTGTTGCAGCGAGTCATGCCCACCGAGGTTCTTACCTATAAAGAGTGGCGACTATTTGAAAGAGCGATTGAGTGTTACATACAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAGGGGGGNRLDLPVVDLASSDPRAAAESIRKACVESGFFYVVNHGVEEGLLKRLFAESSKFFELPMEEKMALRRNSNHRGYTPPYAEKLDPSSKFEGDLKESFYIGPIGDEGLQNDANQWPSEERLPSWRETIKMYHASALATGKRILSLIALSLNLDAEFFENIGAFIRPSAFLRLLHYPGEVDDSDYGNYGASAHSDYGMITLLATDGTPGLQICKEKDRNPQLWEDVHHIDGALIVNIGDLLERWTNCIYRSTVHRVVAVGKERYSAAFFLDPNPDLVVQCLKSCCSESCPPRFLPIKSGDYLKERLSVTYK</aaseq>

Gene Sequence

<dnaseqindica>1..96#219..414#897..977#1043..1094#1227..1348#2156..2256#2429..2487#2587..2643#3022..3067#3295..3374#3467..3527#ATGGCCGGCGGCGGCGGCGGCGGGAATCGCCTGGACCTCCCCGTGGTGGACCTCGCGTCCTCCGACCCCCGAGCCGCCGCCGAGTCCATCCGAAAGGTACCCAATCCATTCCGGATTCCATGGCAATTTTCCTGGAAACAATCTGTTCCGTGGGCGCGGCGGCGGCGGAGAGAGAGAGAACAGGGCGTGATTCGTGTGGGGGTGGTTTGGTTTTGCAGGCGTGCGTGGAGTCCGGATTCTTCTACGTGGTCAACCATGGGGTGGAGGAGGGGTTGCTGAAGCGGTTGTTCGCGGAGAGCTCGAAGTTCTTCGAGCTGCCGATGGAGGAGAAGATGGCGCTGCGGAGGAACAGCAACCACCGGGGATACACCCCACCCTACGCCGAGAAGCTCGATCCCTCGTCCAAATTCGAAGGTCTGCGCCTCCTGTTTTGCTCTGCTCGCCGTGTTAAACTGCTAATTGTTAAACCTAAGCATCCTCTCCTTTTTTAAGACTGTTGATAAATTTAATCCTGAAGTGTATGGGATAACACTGGCAAGTTAGTATAATAGTAGCACATGACAGAGCTGGAGTGACCCTTTTGTCGGCAAAAATCAGAAGTTGACATGTTAGTGCCTGATTATGGAATATTCTTTATTAGCAGTATAAGCAAATTAAAAATGTCCCGATGTTTGTGAAAGATGCTTTTGAAAACTGAACTAGAAACCATGGTTCTGGTTTGATCTATCTGAACATCTCACAATCTTCAATAAGTACAAGGTGCATGGAGTAATAACTAATAAGTACAAGTGCTCACTGCCTATACTTTGAACAATCACTAGATTTTGTGGATTTTACCTTCTGGTGTTTGTAGTGATGTACTTATTTAAGATCTGTAACTGTGATTTATGATACAGGAGACCTCAAGGAAAGTTTCTATATTGGGCCCATTGGAGATGAAGGTTTGCAGAATGATGCTAACCAGTGGCCTTCTGAAGGTACTCCCTTCTCCTTTTTTATCACTTCTTTCCAAAACATAAATAAATTCTATCTTTGGCTACAGAGCGCTTACCAAGTTGGAGGGAGACAATTAAGATGTACCATGCAAGTGCACTGTAAGTCCTCGTTTTGCTCATCTCAGCGAAGAAAATCCATTAATTGTATTACGTGAGCATTGTGTTTGTATAACTTTGGAGTTATTTGTTTAAATAATTTAAATATTCCCGCTTATTCGCTACCACTACCAGGGCTACTGGCAAAAGGATACTCTCTCTAATTGCTCTGAGTTTGAATCTTGACGCTGAATTCTTTGAGAACATCGGTGCCTTCATCCGCCCATCAGCATTTCTTCGATTATTGCACTACCCAGGTCAACTTATTTCATGCCCCTGTATGTATGTCATATGACATTAACCAAAGTAGTATTCTCATGATACGCAGAGAAATGCTAAAAACATGTGTGCTGGTCTTTAGGTTGCTTCTTGTTGTGTTGGATTGCAGATAATTGCCAATGGTTTCTTTAGCTCTGATTTATTCAACAAGTTTATTTATTTCAAACATGAATGAGTGCACTATATGTCATTCTAAAGAATGAAGAACTTGATATCATCCTATTATTGTGGTTTTGTTGTGTTGGTGCTCAGAAACATTACAAATCTGTCCATTACAGTGAATAGGGAAATTGCTACTTTCATGATCTCAATTATAATTTTTTTCTAAACTATAACAATTTCATTTGTTAGCTAAAACTTGCATAGAAGACTACTTTTCAGTTTGTAAAAATATCTTAACTGTTAACTTACAGTAGCAGCTAATGGAGCAGATCTGTGTGATCTCTATTGCTAAAATTTCAAAGGAACTGTCTTGCTGCTGACCGCTGTTTGCTGGAGCATAATGATAAATATGTTCTTGTAATTTGTAAATCAATGTTAATCTAAGTTATAAAGATACCTTAGGTTGCTTCATTTTGTTGATTGTTTTGCTTACCTGTTATTATACTGGAAAGCGGGATGTGAACTGAAAATATCGTGAAGCTTCTTCAAGCTTCTAGGAACGTTTGTTTTTTGTGAGCTGACTGTTTTTCTTTTTTACTGTGGAGCTAGTTAAGCGTTGTGTTTTTCGTCCATACTGTAGTATTTATTGGTTTTATCTAAATAAAAAAGAATTTTAAATGTAGGTGAAGTAGACGACTCTGATTATGGCAATTATGGTGCATCAGCTCACTCAGATTATGGAATGATAACCCTCCTAGCAACAGATGGCACTCCTGGGCTACAGGTACACCATTTTCTTCGCACAATAAATTCACCAACTTAGCTAACCAATCATGTAGACAAATATATGGTCAGAAGGTTTGGTGAGGATGGGGTTATGTTCCCACCTTTTACCACTTTCAAGCAAAAAATAGCTCTTGTTTAGAAAAGTAAGAATATCTGTTGTGAATTTGCAGATATGCAAGGAAAAGGATAGGAATCCCCAGCTCTGGGAAGATGTTCATCACATTGATGGGTAAATAAAAGTAAATAAGTTTTTTTAATATATTAATGGAAAAAAATTCAAATAAATCATTATTTTGTTGTTAAATTTGCTGGTCTCTTGTATCCTCAGGGCCCTGATTGTTAACATTGGCGATTTGCTAGAAAGGTGGACGAATTGTATTTACAGGTACCCTTTTCCTTTTATTTTTGATGACCTATTCTGTCATTCTGTGGTTGTGAGGAAGCCTCATGTACCGTAGTTGTTAAAAAGCTCAAACAAACTAGTTACAATTGTGAGTAGTTGCACCAAGAACTTTCTATTTTTTGCAATTCGACATGGCTAAATTTGTTAGATGACACAATGCTTTCTTAACAAGAAGTTGGTTTAGGATTGTCTCATGAACAGGTTAGACCATTTTAGTGTGTTTTTGAAATTCTATAATTCTTTTGGACTTTGGAGTTCTGTTTTATTACATTATACACTTCCTTTTCTATTTTATATCTCTAAGAAAGAAAAACCTTGTATATGAATTTTGATTGTTTTCCCTCTTTTGCTGACTTGTAGGTCTACAGTGCACCGTGTTGTTGCAGTTGGTAAAGAGCGATATTCTGTGAGTATTACGACTGCTGAATTCAGAATTTCATAATTGAGAGTTTTTTTTCCTGGGGAATCAAGGGGTTTTGTCGCCCACTGAATACATGTTGTAAAGTCAGGTGGACCTATTCATGTGCAAACTATCACTGATAATATAGACGTAGCGTTTCAGCGACTAAATTGCATGCTTAATGTTAGGACCTTTTTGGTGCACTCTCTTACACATGTTCTTCAATTTGTCAGGCGGCTTTTTTTCTTGACCCAAACCCTGATTTAGTGGTTCAGTGTTTGAAAAGCTGTTGCAGCGAGTCATGCCCACCGAGGTTCTTCTCTTCCTCCTTTAGGCTTTAGCACAAGTCTAGTTCCTTTTATTATGCTTGCTTCTCATATTGTTTGAAATTTGATTCATTTTCAGGTTCTTACCTATAAAGAGTGGCGACTATTTGAAAGAGCGATTGAGTGTTACATACAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033302