BGIOSGA033306

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Revision as of 05:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033306| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033306, complete gene.| tag = OsI_343...")
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Gene Name

BGIOSGA033306

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033306, complete gene.

LocusTag

OsI_34377

Ensembl Transcript ID

BGIOSGA033306-TA

Ensembl Protein ID

BGIOSGA033306-PA

Length

5955

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19331605..19337559

Sequence Coding Region

19331605..19331645,19331833..19331900,19332294..19332364,19332690..19332732,19332904..19332974
,19333301..19333343,19333540..19333610,19333970..19334068,19334142..19334183
,19334257..19334348,19334572..19334723,19334826..19334935,19335898..19336059
,19336158..19336357,19336697..19336778,19336859..19336963,19337050..19337154
,19337248..19337559

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19331605..19337559 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19331605..19337559 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACACCTTCGTCACCGACATCCTCGCCCGCACGAGGGTCACGTGGAGCGACGATAACACACTTATGTTATATCAGTATTGTGTGGATGAAGTCGAGGCTTCTGATGCTGAGATAAAGACATGCCATCAAGTAGATGAAGTGGAAAGTGCTGCACCTGAATTAAAGTGGGAAAAGGCTGGCAGAGCTCAATCAAGCAAGGATGGCACTACTCAATCAGATGCTGAGATAAAGACATGCAATCAAGTAGATGAAGTGGAAAGTGCTGCTCCTGAATTAAAGTGGGAAAAGGCTGGCAGAGCTCAATCAAGCAAGGATGGCACTACTCAATCAGATGCTGAGATAAAGACATGCAATCAAGTAGATGAAGTGGAAAGTGCTGCACCTGAATCAAAGTGGGAAAAGTCTTCCCAAATGTTGGCTGATGCAAGTACATTTAAGGAAATGATTGGAAAGTATGTAGCAGAATTGGATTTTGCCATGACAAGAAGTATTGCCCTTGAGGAAACATGTTCGTCCCAAACAGAGAAAATTAAAGACCTTGAGGAAACATGTTCGTCCCAAACAGAAAAAATTAAAACATTGGAGCTGCAGCTTGCATTAGCTAATGAAAAGTTAAAGGTGCATACTGAAAGCATTGTTGTTGCTGAGACTCTTGCATTGCAGGAGCTTAAAGGAAACATTCGAGTCTTCTGTAGGGTGCGACCTTTATTGCCAAATGAATCAACAGCTGTTGCTTATCCAAAGAGTGGAGAAAACTTAGGTCGTGGCATTGAGTTGACACATAATGCTCAACTGTATTCCTTCACATTTGACAAAGTATTTGAGCAGTCGGCATCACAAGAAGATGTGTTCGTTGAGATTTCCCAACTCGTCCAGAGCGCCCTTGATGGCTACAAGGTGTGCCTATTTGCATATGGCCAAACAGGCTCGGGTAAAACATACACAATGATGGGAAATCCAGAATCACAGGACCAAAAAGGATTAATTCCGAGATCACTTGAACAAATTTTCCAAACAAGCCAGGCTCTTATTTCACAGGGATGGAAATATAAGATGCAGGCATCTATGTTGGAAATCTACAATGAAGCCATACGTGATCTGCTAGCCACTCATCGCACAACTATTCAAGATGGTGGCGCTTCAAAGTACAGTATCAAGCATGATGCATATGGTAATACCCATGTATCAGATCTCACAATCATCGATGTATCGAGTATCAATGAAGTTTCTTCTCTCCTCAAGCGGGCTGCTTGGAGCAGATCTGTTGGAAGAACACAGATGAACGAAGAATCATCTAGAAGTCATTGTGTGTTCACGCTTCGAATTTTTGCTGTCCATGAGGGAACAAACCAGCAGGTGCAAGGAGTGCTCAATCTAATCGATCTTGCCGGCAGTGAGCGGCTTAACAAGAGCGGTGCCACCGGAGATAGGCTAAAGGAGACACAGGCTATTAATAAAAGCCTCTCGTGCTTGAGCGATGTAATCTTCTCCATTGCAAATAAAGAGGAGCACGTTCCATTCAGGAACTCAAAATTGACGTACCTGCTACAGCCATGCCTTGGAGGAGGCTCGAAGACACTTGTGTTTGTGAATCTGTCTCCAGAGGTGTCGTCTACAGGGGAGTCAATTTGCTCGCTACGGTTCGCAGCACGGGTGAACTCGTGCGAGATTGGCATCCCTCGTCGTCAAACCCAAGGGGCGCCCGACGCCTCCGACATGTGGTCGCCCACGACTGCGAAGCGCCCGCCTCAGCCCGGCCCTCCATCCCTCGTCCGACTCCTTCGCTGCCGCCGGCGCGACAAGCCGCCCGACGACAACGAGCCGCCCGACGACAACGACGCCGCCCGAAGCACTCGCGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MEDTFVTDILARTRVTWSDDNTLMLYQYCVDEVEASDAEIKTCHQVDEVESAAPELKWEKAGRAQSSKDGTTQSDAEIKTCNQVDEVESAAPELKWEKAGRAQSSKDGTTQSDAEIKTCNQVDEVESAAPESKWEKSSQMLADASTFKEMIGKYVAELDFAMTRSIALEETCSSQTEKIKDLEETCSSQTEKIKTLELQLALANEKLKVHTESIVVAETLALQELKGNIRVFCRVRPLLPNESTAVAYPKSGENLGRGIELTHNAQLYSFTFDKVFEQSASQEDVFVEISQLVQSALDGYKVCLFAYGQTGSGKTYTMMGNPESQDQKGLIPRSLEQIFQTSQALISQGWKYKMQASMLEIYNEAIRDLLATHRTTIQDGGASKYSIKHDAYGNTHVSDLTIIDVSSINEVSSLLKRAAWSRSVGRTQMNEESSRSHCVFTLRIFAVHEGTNQQVQGVLNLIDLAGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIANKEEHVPFRNSKLTYLLQPCLGGGSKTLVFVNLSPEVSSTGESICSLRFAARVNSCEIGIPRRQTQGAPDASDMWSPTTAKRPPQPGPPSLVRLLRCRRRDKPPDDNEPPDDNDAARSTRG</aaseq>

Gene Sequence

<dnaseqindica>1..41#229..296#690..760#1086..1128#1300..1370#1697..1739#1936..2006#2366..2464#2538..2579#2653..2744#2968..3119#3222..3331#4294..4455#4554..4753#5093..5174#5255..5359#5446..5550#5644..5955#ATGGAGGACACCTTCGTCACCGACATCCTCGCCCGCACGAGGTTCGGCCCCTCCGCGCCACAAGATTTATTCCATCATTCAAAAAGACTTAGGGGGAGAATGATGGAATAAGTCTTGTGGCTGAATAGTCTAGTCTTTGCATTCCTTTTTACCTTTTTAGCTTTTAGATGCTCTAAGTTTTTCAGCTTTTAGTTTGTTTTAGAGGTTCGCAACATCTTTTTTTCCCAGGGTCACGTGGAGCGACGATAACACACTTATGTTATATCAGTATTGTGTGGATGAAGTCGAGGCTTCTGGTGAGCTGTCGGAAGAGTCTTATCGGTTGATCCAACAGAAGATGTGTGAACAGGGAGCAACCTACGGTGTCAAGAATATAAAACAAAAGATCAGAAACACCAGAAAATTGTGGGCTAAAATGGTAATATTACTTTCACTTTTGTTTAAATTCTTTGCAACAACGTTACTGTTCTCTTATGAGTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGGGGTTTTGGCTATGGGATGGGCATGGGATCAGGGGTCGGGGGTCGGGGTATGGGGTTTTGGGTATGAGGTATTGAATCAAAGGAACTCTTTTTTTTTTCAGATGCTGAGATAAAGACATGCCATCAAGTAGATGAAGTGGAAAGTGCTGCACCTGAATTAAAGTGGGAAAAGGTAAGCTTGCGATTTGCAATTCCAGTTTAATGCTTCTAAGTTCTGACTGCATAACTTATACAACATGTTACAATAGAGAAAATTGACATTGTGCCACTTAAATTGTACTGTTGTATTCCATTGATTCTGTGGTGATAAACACGCCTCTATTCCATGCAGTCTTGCTTTCTTTCTAGAAAAGCCTTAATTTGCGGAAAAAAAACTCTATTAATTTTCTAGAAATGACTTGCTTGACAGATTATTTGACCAGTAAAACCTTTTAAATCGTGAGATTTCATTTCTCAAGTTNTGTGCCTTCGATTAATTAACATTTCTATCATTTTAGGCTGGCAGAGCTCAATCAAGCAAGGATGGCACTACTCAATCAGGTATGGGTCGGGGGTCGCATGGGGCCAGGGGTCGGGTATGGGATGGAGTATGGGATCGGGGGTCGGGGTCGGGGTATGGGGTTTTGGGTATGGGATGGGCATGGGATCGGGGGTCGGGGTATGGGGTTTTGGGTATGAGGTATTGAATTAAAGGAACTCTTTTTTTTTCAGATGCTGAGATAAAGACATGCAATCAAGTAGATGAAGTGGAAAGTGCTGCTCCTGAATTAAAGTGGGAAAAGGTAAGCTTGCGATTTGCAATTCCAGTTTAATGCTTCTAAGTTCTGACTGCATAACTTATACAACATGTTACAATAGAGAAAATTGACATTGTGCCACTTAAATTGTACTGCTGTATTCCATTGATTCTGTGGTGATAAACAACGCCTCTATTCCATGCAGTCTTGCTTTCTTTCTAGAAAAGTCTTAATTTGCGGAAAAAAACTCTATTAATTTTCTAGAAATGACTTGCTTGACAGATTATTTGACCAGGTAAAACCTTTTAAATCTAACATTTCATTTCTCAAGTTTTGTGCCTTTCGATTAATTAACATTTCTATCATTTTAGGCTGGCAGAGCTCAATCAAGCAAGGATGGCACTACTCAATCAGGTATGGGTCGGGGGTCGCGTGGGGTCAGGGGTCGGGTATGGAGTTTTGGGTATGGGATGGGGTATGGGTCGGGGGTCGCGTGGGGTCGGGGTATGGGGTTTTGGGTATGGGATGGGCATGCGATCAGGGGTCGGGGGTCGTGGTATGGGGTTTTGGGTATGAGGTATTGAATCAAAGGAACTCTTTTTTTTTTCAGATGCTGAGATAAAGACATGCAATCAAGTAGATGAAGTGGAAAGTGCTGCACCTGAATCAAAGTGGGAAAAGGTAAGCTTGCGATTTGCAATTCCAGTTTAATGCTTCTAACTGCATAACTTATACAACATGTTACAATAGAGAAAATTGACATTGTGCCACTTAAATTGTACTGCTGTATTCCATTGATTCTGTGGTGATAAACAACGCCTCTATTCCATGCAGTCTTGCTTTCTTTCTAGAAAAGCCTTAATTTGCGGAAAAAAACTCTATAATACAATACTCGTAATGTCTCTTAAACTGTTCATCTTAAATTGTACTGCTGTATTCCATTGATTCTGTGGTGATAAACAACGTCTCTATTCATCTTAAATTGTACTGCTGTATTCCATTGATTCTGTGGTGATAAACAACGCATCTATTCCATGCAGTCTTCCCAAATGTTGGCTGATGCAAGTACATTTAAGGAAATGATTGGAAAGTATGTAGCAGAATTGGATTTTGCCATGACAAGAAGTATTGCCCTTGAGGTATGCTCCTGTGCTCTAATTGATTCAATGTCTAATTACTGCAATCAGTGCAGCTAATGTATTTTTAATACAGGAAACATGTTCGTCCCAAACAGAGAAAATTAAAGACCTTGAGGTATGCTCCTGTGCTCTAATTGATTCAATGTCTAATTACTGCAACCAGTGCAGCTAATGTATTTTCAATACAGGAAACATGTTCGTCCCAAACAGAAAAAATTAAAACATTGGAGCTGCAGCTTGCATTAGCTAATGAAAAGTTAAAGGTGCATACTGAAAGCATGTACGCTTTGTTTCAATATATTATATCCACAAGCGCTTAAGGACTTGCTATTTCCTTTAATTATGTAGAGATCTGATTTTCAAAAAAGAATGTTGGAGGATCTGCAATTACGACTCCAAGAAGCTGAGCAGCAAATTTTGGACGGAGAGAATTTGCGGAAAAAACTCCATGATACAATACTCGTAATGTCTCTTAAACTGTTCTTAGTCTTTTGTGTTTTTAGTGTTGTTGCTGAGACTCTTGCATTGCAGGAGCTTAAAGGAAACATTCGAGTCTTCTGTAGGGTGCGACCTTTATTGCCAAATGAATCAACAGCTGTTGCTTATCCAAAGAGTGGAGAAAACTTAGGTCGTGGCATTGAGTTGACACATAATGGTATAGTAACACTTGCTGCGATCCTTCTGTATTTTTTACTTTCATATCTGCACCTCTTGGAAAATTCATCGCATTCCAGTAAATCTTCATTTTTCTTCACAGCTCAACTGTATTCCTTCACATTTGACAAAGTATTTGAGCAGTCGGCATCACAAGAAGATGTGTTCGTTGAGATTTCCCAACTCGTCCAGAGCGCCCTTGATGGCTACAAGGTAACATTTACCTGTCGCTGTGTTTTGAGAAGTGCAAGAGCACAACCCCACTACAGGAGTGGGAAAAAAGTTTTAAGTCCACAAAAGTTAGTATCCATAATCAGGGGCGGAGCCAGGATTTTGAGCCACTGGGGTAATGATTTTTAATACTTACGTCTTGTTTGAAACTCTAATTATTCTCGAAGCTAGATATTTTTAGCTCAAAACTCTTTTGGAGCTAGAGCTATGAGTAAGTTGGTATTGTTTCATTTTGCGAAAAATAAATGTTTAAAGTCTATTCTATAAGAATTTATGAGATTTTTAAGGTCCAAAAAATTAAAAGTTGAGGCTATATACAACCAGGCATAACAACCATGTGTTTTTTCAGACATAAAAGTATGTTCTATTACTCCCTCTGGCTCAAAATACAACTACCTACGTCTCTTTAAGAGATTAATGTTAGGGTGTGAAATAATTATGATTGGTTGAAAAAAAGAGTAGGTGAAAAATTTAAGTCGGGGAATATTGTGATTCGTTGAGATGGGATGGTTTATTGAAAATAGTTGTACTTTAAAGCAAATTTAAATCTTAGAAGTAACATGTTTTGAGACGGAGTGAGTAGCTTAAAAAACACAACTAACATCTAGTAGTTAATTAGCAAAACTACAGGCCTAATGCATTGATATACACAGCACATAGCTAAAATAAATAGTTGGTTAATAGATCAAATATGTCTAATTGCAGCATTAGTAGTGGATTGACAGTAGGATAACACAGCTAACAAATTGTGCTTTCAACGAAAGAAGCTGTATTCTTTCAGCTTTCATGAGCTCCAGCAGTTTAGCCGGCTGGTCGGGGTCATTAAGCTTTTGCTGCTGGGGTCATTAGCTATAAAATACTGAATAATTCACTTGATTGATCGAATAGTACTGCAGCTCCGCCGCTGTCTATAATTCGTGCTAACTAATGTGGAAACAACTCAGGTGTGCCTATTTGCATATGGCCAAACAGGCTCGGGTAAAACATACACAATGATGGGAAATCCAGAATCACAGGACCAAAAAGGATTAATTCCGAGATCACTTGAACAAATTTTCCAAACAAGCCAGGCTCTTATTTCACAGGGATGGAAATATAAGATGCAGGTGAGTTCTTACCCACTTCAATTGGTCAGTTTGTTTGAGCTAACAAAGGTGCAGGCTTTCTATAGTTGTAACTCTCATGTTTACCTTTGGACATCTAGGCATCTATGTTGGAAATCTACAATGAAGCCATACGTGATCTGCTAGCCACTCATCGCACAACTATTCAAGATGGTGGCGCTTCAAAGTACAGTATCAAGCATGATGCATATGGTAATACCCATGTATCAGATCTCACAATCATCGATGTATCGAGTATCAATGAAGTTTCTTCTCTCCTCAAGCGGGCTGCTTGGAGCAGGTTACACTCTAGTTCTTCTCATCAGTTTTTCAAATCTTCAATTAAATTCGTGAGAACAGAAGAATAGAAAGAAGGCAAAGAACCTGGATATAGTTTCTGTGAGCACATAGAAACATAATCAGGTAGTCATAAGGCCTGAAGTGAAGTTAGAAGCATAATTTCAATGAAACGTAATAAGTCAAAAACTGGCTTTATTATGACTCCATTTTCACAATCATGGTATCAACAATTGTGCCTTACATACTGTTGTGCTATAGAATGCACGATAATTTAGCTGAATTCTCCAAGAAAGAGAATTTGCTGCCATACGTTGTAAACAGCTTTATTATTTATCTGCAGATCTGTTGGAAGAACACAGATGAACGAAGAATCATCTAGAAGTCATTGTGTGTTCACGCTTCGAATTTTTGCTGTCCATGAGGTATGCGATATCTTCTAATGTAGGTCTTGCTAATGCCTGGTAATTTTTTGTATTCATCGTTTGGATTGTTTTCTCTACAGGGAACAAACCAGCAGGTGCAAGGAGTGCTCAATCTAATCGATCTTGCCGGCAGTGAGCGGCTTAACAAGAGCGGTGCCACCGGAGATAGGCTAAAGGAGACACAGGTAATTTGCTATTTCACACCTCAGTTTTTGTTGCATCTAAGGTGTATAACATGGTACCACTGTTATGATGTAAATTTGCTATTTAGGCTATTAATAAAAGCCTCTCGTGCTTGAGCGATGTAATCTTCTCCATTGCAAATAAAGAGGAGCACGTTCCATTCAGGAACTCAAAATTGACGTACCTGCTACAGGTAAATTATAAGCACTCAGCTAAGAATATCTGCAAACTTGGTATGGTTTCCATGGTTATAATGTGTGAATGATTTTGTTCCCCTTGGACACAGCCATGCCTTGGAGGAGGCTCGAAGACACTTGTGTTTGTGAATCTGTCTCCAGAGGTGTCGTCTACAGGGGAGTCAATTTGCTCGCTACGGTTCGCAGCACGGGTGAACTCGTGCGAGATTGGCATCCCTCGTCGTCAAACCCAAGGGGCGCCCGACGCCTCCGACATGTGGTCGCCCACGACTGCGAAGCGCCCGCCTCAGCCCGGCCCTCCATCCCTCGTCCGACTCCTTCGCTGCCGCCGGCGCGACAAGCCGCCCGACGACAACGAGCCGCCCGACGACAACGACGCCGCCCGAAGCACTCGCGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033306