Os11g0118500

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0118500| Description = NPH3 domain containing protein| Version = NM_001072129.2 GI:297611115 GeneID:4349618| Length = 4468 bp| Definition ...")
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Gene Name

Os11g0118500

Description

NPH3 domain containing protein

Version

NM_001072129.2 GI:297611115 GeneID:4349618

Length

4468 bp

Definition

Oryza sativa Japonica Group Os11g0118500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:826390..830857

Sequence Coding Region

826669..827349

Expression

GEO Profiles:Os11g0118500

Genome Context

<gbrowseImage1> name=NC_008404:826390..830857 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:826390..830857 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtacagctttgtgctgtgtgtgtgtgacgaactgaattgtgataaacaacaggctcatccatctctgatggagtcggagtgcaagaaggtgtgcaagctgatcgactgccagaagctgtcgcaggacgcgtcgagccacgcggcgcagaacgaccgcctccccatccagacggtggtgcgcgtcctctacttcgagcagctccgcctcaaatccacggtgtcgtcaactaccccccacaccacctccctcggcggcgacggctgcggcgggtcgctgtcgcagcggatgatgatgaccggcggcagcggggtggcgagctcgtgcgtgtcgccgcagcgcgacaactacgcgtcgctgcggcgggagaaccgggagctgaagctggagatcgcgcggatgcgggtgcggctgacggagctggagcgggagcagggggtgatgaggcaggggatgcgggatggccgtggcggcggggagcacggccgggcgctgctggcgtcgatatcgcgagggatcgggaggatcgccatgctcgggggagcgcagggaggagcggagaggaggaagacgaagaagagctctcattcgcagtctcagtggtcgtcggatggtggcgggaagatgagcaacaggcggaggcacaaggcatcatctgtcacatacgctgcttcctga</cdnaseq>

Protein Sequence

<aaseq>MMYSFVLCVCDELNCDKQQAHPSLMESECKKVCKLIDCQKLSQD ASSHAAQNDRLPIQTVVRVLYFEQLRLKSTVSSTTPHTTSLGGDGCGGSLSQRMMMTG GSGVASSCVSPQRDNYASLRRENRELKLEIARMRVRLTELEREQGVMRQGMRDGRGGG EHGRALLASISRGIGRIAMLGGAQGGAERRKTKKSSHSQSQWSSDGGGKMSNRRRHKA SSVTYAAS</aaseq>

Gene Sequence

<dnaseqindica>3509..4189#attgcccagagcttttcttttctacacaaagggaagggaaagaagaaacaggagggtttggtatctgaggctgagcaatggggctggccagcgacagccctgcgtcgttccccttctccgccgccaagctcgccgcctcgccgcgcgtctgcaaccccatcagcaggaggtaacttgtaccaatgctgttcctttcccttccatttctgagctcgggtgtggttttgccgcggtttattctttgtagaaaatgcaatggcgagtgcatgctggtgttcctatagtttgctagttttggcaaaaacttgtcctttgtcagttcagatcagttgcaactagtttttgttcattttgctgcacaagtttggattgttcatgttgcatttctctgggactctgaaagaagcagagaaaggcataaaccctgctggctgctgcagtgcaggtgcagccactccatgaggagaggagattggagagggtcacttgccttgtgtaatggtggtaggagaatctcagccccgccacgccggaggagtttgagctcggccaagaggggtcggagtttaattctccgaacccctttgaaaaataacagggggtcggagtcgaattttccgagcagtgggggtcggggtttaatactccgacgtccctgaaaaatatcagaggggtcggggttgaattctctgaacccgctgaaatactggtttctcgcaaatgctaccttcagagttcagagttcagattatgagatgacatcagaagttatcctttgtataactgatgaaagaagtggcaaaccttaaaaatgttcatcggaatatcggatggtcccgggcatcacaaaacgtctgcacttttttttatctcgtccggtgacttgtctagattcaggtccctacatcagcatcctcttttctgcatctggttctcaacctctgaacaagtcaatgaaggtttttttcccccctactctgtctctctctttcttaaaagaaaatgcagtcgattttcggagaaaaaaattgcaaactttagcaatttaactcgaaggatctacttcttatgtgatttgtttggccggaatgtttgattgaattgtgaattgtgattggaacctacattgatagtatgtcttacagtcttagtggactgaaataatctgtaccagttgtttgatttctgtagcagttaccactgccttgttccagtcctctgtaaaaagggatgtgatcaattcttacatgttcctagaagagtgtagcaaaactagcatgagaagcatatcaaacttgatattcacatgctataaatgcaaatgcagttcttggtatctaatacttcaagaatgttccttgttgtgcaggatattttctgatgttgctggagatttaacagtatcggtggatggccaatcttttctactacataaggtgccctatctatttcaatagcttcatcttacccattctctgtagtctgtcattttttctgttgcatttttttttatcattagtcaccaactactgcacaagcctgccaagtatgttttgggggactattgctcagttgagcagttggattttctttgcaggaagattaattacctgacaatgttataagtggagtaggacttccatattaatttgcttaacatgagaaccaatgtgattgaagtgaacacctaattgcaatttggggacataaaaatcataatgtatatccttactgatgtgataattatacaagcatataattttttgtactgtaggttagtgttcaatattcacaatttcttaaatgtagcgctctgcaaaaggcaagtatctttcttagtgggggtcaacagggatttctgatcatataggctgaaggtgttagtcaatataagagtgtgtaattggagacaaagcagtaattggttaacaggaaaatcagggttaaggttgtatatgttcttttgtacattagtaatgctttttgagctttcatatggaggtttttttttttgtgaaaaggggctttcataggaaggtattagcaaggaaaatgtatttcatatttatctctgcataattaatataagattatatagactgaagtaaagttgcaaaatgggtttaatcatagtatacttctgtaccgattttgcagttccctctagtctctaggtgtggaagaatacgaagaatggtagctgaatccaaggatccagatctctcaaagttggagctagtaaatgtaccagggggagctttagcatttgaacttgctgccaagttctgttatgggagtaattttgaaattaatactgtcaatgtggctcatctccggtgcattgcagagtatttggaaatgacagaagagtaccaagaggagaatctcattgttcggacggagacatacctgaacgagattgtagtcaagaaccttgataaatccctagaagtcttatgtgcatgtgatgggttagatccaacagtggaagacgtcggacttgtagacatgtgcgtcgatgcaattgcgataaatgcaagcaaggagcagctggtttcaggcttggctcatttggaatgtgatgtcggatcaggaaagttgcgcatgcattgtcaagattggtgggttgaggatctttctgcactaagaattgactattatcagcgtgttatcatcgcaatgagaagaactggggtgaggccagagagtattggcacatccattgtgcactatgctcaaacagctctgaagggtatcgaaaggcggcatgtatgggactcaggtcctcttgttggagacaaccaacgagtgattgtggagacgctcattgatctgttggcaacagaaaagatcacatcggttaccttgtcattcttgtttggcatgctgagaatggcaatagaagttgatgcaggactagattataggattgaagttgagaaaaggattggacttcagcttgagatggcatcacttgatgatcttctgatccccgcaacgcagacaagcgactcgatgtttgatgtcgacaccgtccatcgcatattggtgaatttcctgcagaggatagaggaagatgattcaggaaacttgtcaccttgcggatatgagtctgatgatggactaaagtctccgagccacagctcagtcttgaaggttggaagactgatggatggttaccttgcagaaatagcaccagatccatatctgaaactgcagaagttcatggctctcatcgaactcttaccggactatgcgagaattgtcgatgacggactctaccgtgccattgacatatacctgaaggtaagctaaactgtactgcaaaccttattgttcttttccatcagtaacttgatatctctttctgattatgtccaatggcaaattcagtaactgccactctgctagcattgcaacgctgtttgcttgttgatgaaaatgtgacatgaatacttgcactgtttaatgtgatcattagaaccatttgcaatctgtgtagtgtctgatgatgtacagctttgtgctgtgtgtgtgtgacgaactgaattgtgataaacaacaggctcatccatctctgatggagtcggagtgcaagaaggtgtgcaagctgatcgactgccagaagctgtcgcaggacgcgtcgagccacgcggcgcagaacgaccgcctccccatccagacggtggtgcgcgtcctctacttcgagcagctccgcctcaaatccacggtgtcgtcaactaccccccacaccacctccctcggcggcgacggctgcggcgggtcgctgtcgcagcggatgatgatgaccggcggcagcggggtggcgagctcgtgcgtgtcgccgcagcgcgacaactacgcgtcgctgcggcgggagaaccgggagctgaagctggagatcgcgcggatgcgggtgcggctgacggagctggagcgggagcagggggtgatgaggcaggggatgcgggatggccgtggcggcggggagcacggccgggcgctgctggcgtcgatatcgcgagggatcgggaggatcgccatgctcgggggagcgcagggaggagcggagaggaggaagacgaagaagagctctcattcgcagtctcagtggtcgtcggatggtggcgggaagatgagcaacaggcggaggcacaaggcatcatctgtcacatacgctgcttcctgaatcatcaagctgctgtgttctcgttgctgcatgcattttacagggaagagatggtgttataaaccgcagggaaaatgtaaaattctacagctaggtgaagagattaaagtgtaacactcctttattagataagctaatctagttctaatgtacaagtagtagcattttcattttgggtgtagccttttcttggtcacggattggcggcctcctgcgctgatggaacgaggggaattttgcaaaagaacactagtaatccaaatcatggatattttgcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0118500, RefSeq:Os11g0118500