Os11g0119200

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0119200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001189393.1 GI:297727916 GeneID:9270841| Length = 445...")
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Gene Name

Os11g0119200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001189393.1 GI:297727916 GeneID:9270841

Length

4457 bp

Definition

Oryza sativa Japonica Group Os11g0119200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:855527..859983

Sequence Coding Region

855925..857400

Expression

GEO Profiles:Os11g0119200

Genome Context

<gbrowseImage1> name=NC_008404:855527..859983 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:855527..859983 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgaccatcaatttgccggccaaccagatgtgcagtgcctagtttgcacaaggccgtttactttggatgctcaggtgactgatacctttgaagctttagccatatgcagggactgcaaggccacagtacttaacgatgtcgaaagagatgaaataaccagcacttctcatcacacaagacggagaaggcagagatccaggactgcaagtattgattccctggaggacgcattctcgcaggagttctctcagctgatcgacttagcaagaagacaaggtcgtgaaacggatattgattcttcgtcagtcctgccgcaacatgcgtcgtacaatgcgacaccaagccactctcaaagatggcatgcttcagatgacgagagcgacggccttaattatgttgattctgtgtttggtgaaattgaatcaaccatcagttttggtgactatggtgcggattcagacacctccatagaggaacatagtgtatcggcaaggaggaggatttccattcaacttgacaatggaagttacatgaacacagataccgatattgatcccatgaatgctaggctggatcagtgggattcagatgaccaggaagatgtggaagagtctggttttgatgaaacaataaacaccatgacccagcaccagcagcaatcacatgatattcagctaagtggattgagtgaggacgaatctgaagatggtgtatggaattggagcgtggctgtacgtcaaagagcaaacgtgacaaacttgctagaggacatggaagggccagaaatgaggacaacttttgtcgggaatccagatgattatgttgatgcaaggcagttcgagatgctccttgagcaatttgctgaggacaacagttccagaagaggagctccaccagctgctacatcctttattgaaaatctcccctctgtgattatctccacaagtcatcagataaatgatgatgtgatctgtccggtctgcaaagatccaattcctaccagagctagagcaaaacagctaccatgcatgcatctttatcattcatcgtgcatcttgccatggtttagttctagaaatacatgtcctgtctgccgatatgagcttcctacagatgatgcagagtatgaaaggtccaagcaagccacaaccaatgtaagagacattcaggttgtggaagaaaattctgatgaacaagaggtccaggtaactcgtcagatggctgttggtgctatcgaagagactaatacaagtgaacacaatgttcgtgttgatgagcaaccaagcagtgcacgcaggcgcagtggatggctttttattgctgctgctccagtcgtaagccttatcggtttcgctctagttttatgctttacaaatcctgctaggagtggtagaaggcaactgtactgtagatccccaagtgccactgaagtacatgtgggtaccaaaaagagttggtggtctatgttctag</cdnaseq>

Protein Sequence

<aaseq>MSDHQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATV LNDVERDEITSTSHHTRRRRQRSRTASIDSLEDAFSQEFSQLIDLARRQGRETDIDSS SVLPQHASYNATPSHSQRWHASDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEE HSVSARRRISIQLDNGSYMNTDTDIDPMNARLDQWDSDDQEDVEESGFDETINTMTQH QQQSHDIQLSGLSEDESEDGVWNWSVAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYV DARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIP TRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQV VEENSDEQEVQVTRQMAVGAIEETNTSEHNVRVDEQPSSARRRSGWLFIAAAPVVSLI GFALVLCFTNPARSGRRQLYCRSPSATEVHVGTKKSWWSMF</aaseq>

Gene Sequence

<dnaseqindica>399..1874#gctccactgattcgattggcgtcaccttcatcaatcgatcgctgcagactgcagttggttccctcctctcctgccaacgaccacgagccctagtttaggccgcccccaaatctactgccatccccgactagtatcccatttctcttgattttaagggatcctgagggggatgcttcctctactctgctgcagcaacgcttgacaaggtggaggttccgctgtttctcaccacttcttctctgcaatctctaatttctgttcatcttgttgagcatatgcagcacaatcactttgatacaacttcactgcagaacttccgctaactacaaattttccctccaggctatcacatccaatccaatggtgcactgctgaccaacttcagtgtcgggatatccatgtctgaccatcaatttgccggccaaccagatgtgcagtgcctagtttgcacaaggccgtttactttggatgctcaggtgactgatacctttgaagctttagccatatgcagggactgcaaggccacagtacttaacgatgtcgaaagagatgaaataaccagcacttctcatcacacaagacggagaaggcagagatccaggactgcaagtattgattccctggaggacgcattctcgcaggagttctctcagctgatcgacttagcaagaagacaaggtcgtgaaacggatattgattcttcgtcagtcctgccgcaacatgcgtcgtacaatgcgacaccaagccactctcaaagatggcatgcttcagatgacgagagcgacggccttaattatgttgattctgtgtttggtgaaattgaatcaaccatcagttttggtgactatggtgcggattcagacacctccatagaggaacatagtgtatcggcaaggaggaggatttccattcaacttgacaatggaagttacatgaacacagataccgatattgatcccatgaatgctaggctggatcagtgggattcagatgaccaggaagatgtggaagagtctggttttgatgaaacaataaacaccatgacccagcaccagcagcaatcacatgatattcagctaagtggattgagtgaggacgaatctgaagatggtgtatggaattggagcgtggctgtacgtcaaagagcaaacgtgacaaacttgctagaggacatggaagggccagaaatgaggacaacttttgtcgggaatccagatgattatgttgatgcaaggcagttcgagatgctccttgagcaatttgctgaggacaacagttccagaagaggagctccaccagctgctacatcctttattgaaaatctcccctctgtgattatctccacaagtcatcagataaatgatgatgtgatctgtccggtctgcaaagatccaattcctaccagagctagagcaaaacagctaccatgcatgcatctttatcattcatcgtgcatcttgccatggtttagttctagaaatacatgtcctgtctgccgatatgagcttcctacagatgatgcagagtatgaaaggtccaagcaagccacaaccaatgtaagagacattcaggttgtggaagaaaattctgatgaacaagaggtccaggtaactcgtcagatggctgttggtgctatcgaagagactaatacaagtgaacacaatgttcgtgttgatgagcaaccaagcagtgcacgcaggcgcagtggatggctttttattgctgctgctccagtcgtaagccttatcggtttcgctctagttttatgctttacaaatcctgctaggagtggtagaaggcaactgtactgtagatccccaagtgccactgaagtacatgtgggtaccaaaaagagttggtggtctatgttctagaatgttccggcggtacatctgataacaaaatgactatatatggtggtgcgtgattgtttctttagaatagttttattttaaaattttcaaatgttgtagttgctgcagtgaccggtcggagtgttgtaaaagaattcacatgcctagtttcttctgctactttgctcagtcaagaaaagtgtgtattgatacttgctatttgtttaacatatatgtgccattggatatcctatgcttccttgattccttctgttgttgcctcatttaaaaatcaccatggaagagaagactccatttgcattcagtgcttttcagaattctacccagtgtccagttgagaagtaattcgtctcctattgtttgaagctcgcgtctaggcttcattggtttgtgcctcacaaattttttctgtatgttaattcttggtatattgtttctctcatgaaatgcttctggtagctaaagtaggttgtgcataatgcagtatgctagcacagaacttaaggctggttttagattgtcatcaggtaaaacagggggatcaaaatgattttcttgcagtaatttagtctgttgaattcacatcgtcatgaactggaaggtctaactgattgtaaattgatcccaagatgtgaaagcaacctacaaaacaatcagttgttgaagaaaaggtcaaacaaaagaattcacatgcttgaggtgttaaacaaatatataaagctagtgcacgaaagacctaatgtactgaagatttgacagaaataatttgcttctctggttccctatgctcatggagaaattgcttgcactcattgttgttcttgtcatacttcttagcttagctctgttctacttgtgcaacatcctatggctgagggctgtgaagataaggaagaagttgaggaggcaaggcataaggggtcccaagcctacttttctctatggcaacaccaaggagatcaaaagaatccgacaagaactcaaactttcacagaagcaaggcaccaacaacttcatctccaccctcttcccacacttcctcctttggcgggaaacttatggtatgtatatgctagtgttttgtgactttgtccatgattggctcttgcactcatatgttcatgactcatgagtagatcagattgatgataggatcctgatgtttattaatggcatgtcttggagaaaattaatcacctacaactgttgaagtgaattaatgaattaccatggagaagcaggaccccgaagtatccctgctattaaaatctagtttataagcctgaattgatcatttagtagggaattggagagcaatcataacttttttaatctctcctctttttactgtttttcaacttttagtaggatatcaaattatataaacagatcagacacttttcagagaaatggtgccatcacacatttttaaatatatatctaatcgtttgttttgtaattttattttgtccagtttggttgctatttaccatcctacgaagtttctgtttcagattctaaacaagctcagatgctagtactgagaattattaaacaagtttgtcaggatcataattattgatgaatagtttatttagactgtggggcctttttacagcttaatataatagccattcaactcttgacagtcatataaaggactcagtagttgaccatcaattaaaattttcatacacccattttatatgttatctcgagttttgtgttggataactaaacatttcccaactacttgtagattaagcaggatctgacctactttggtagtgagaattctaatacaataacaatcatatttatcatttcctttgctctgaaaaatgtaagtttgacaattgatttcaatcttagaatagactatgctttttatctcattttccctatattcatgtcaaatttgagggaatgtccatgttgagttcttcttaatgaagttaatttacatgtgtattttgaccaggcccagtgttcctatactcaacaggagctatggagatactacaagtttctcacccagatatggtgaaggatataggccggtggacaccatcagagcttggtaagcctaattatctaaagaaatctcgcaaggccctctttggaggaggtttatttacagagaatggtgatgaatgggcctatcagaggaagataattgcaccagagttcttcatggataagattaaggtaccattaaattgtgattgcttgtagttttcatggactgaaaactagatctcgtatcacgcgtgattgcagttgttatttatatatgcatgcagggtatgatacagctaattgaggatgcaaccgttccagtgttagaagcatgggaggatatgattgacgatgagggagggtgtagggaaatagttgtcgatgattacttgcggaacttgtcagcagatgtaattgccagggcttgctttgggagtagcttcacaaaaggagaagaaatattttgcaagcttaggcagctccaaaaagcaattgctcggcaagattcgtttgttggtctgtctgcactgtggtaagtcaatgaaattagtggcaataaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0119200, RefSeq:Os11g0119200