BGIOSGA033357

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Revision as of 05:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033357| Description = Gibberellin 20 oxidase 2| Definition = Oryza sativa Indica Group BGIOSGA033357, complete gene.| tag = OSJNBB0060I05.4...")
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Gene Name

BGIOSGA033357

Description

Gibberellin 20 oxidase 2

Definition

Oryza sativa Indica Group BGIOSGA033357, complete gene.

LocusTag

OSJNBB0060I05.4

Ensembl Transcript ID

BGIOSGA033357-TA

Ensembl Protein ID

BGIOSGA033357-PA

Length

5750

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19874144..19879893

Sequence Coding Region

19874144..19874356,19874453..19874700,19878758..19879082,19879651..19879893

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19874144..19879893 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19874144..19879893 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCGCACCCACGGCTTCTTCCAGGTGGTGAACCATGGCATCGATGCGGCGCTGATCGCGTCGGTCATGGAGGTGGGCCGCGAGTTCTTCCGGCTGCCGGCGGAGGAGAAGGCGAAGCTCTACTCCGACGATCCGGCCAAGAAGATACGGCTGTCGACGAGCTTCAACGTGCGCAAGGAGACGGTGCACAACTGGCGCGATTACCTCCGCCTCCACTGCTATCCTCTCCACCAGTTCGTCCCCGACTGGCCCTCCAATCCGCCCTCCTTCAAGGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATATCGGAGAGCCTTGGGCTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACATGGCGGTGAACTACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACACTGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCGGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAGGCGCTGAGCAACGGGAAGTACAGGAGCGTGTGGCACCGGGCGGTGGTGAACTCCGACAGGGAGAGGATGTCGGTGGCGTCGTTCCTGTGCCCGTGCAACAGCGTGGAGCTCGGCCCGGCCAAGAAGCTCATCACCGACGACTCGCCGGCGGTGTACCGGAACTACACCTACGACGAGTACTACAAGAAGTTCTGGAGCAGGAACCTTGACCAGGAGCATTGCCTCGAGCTGTTCAGGACTTAG</cdnaseq>

Protein Sequence

<aaseq>MAAEAEQQHQLLSTAVHDTMPGKYVRPESQRPRLDLVVSDARIPVVDLASPDRAAVVSAVGDACRTHGFFQVVNHGIDAALIASVMEVGREFFRLPAEEKAKLYSDDPAKKIRLSTSFNVRKETVHNWRDYLRLHCYPLHQFVPDWPSNPPSFKEIIGTYCTEVRELGFRLYEAISESLGLEGGYMRETLGEQEQHMAVNYYPQCPEPELTYGLPAHTDPNALTILLMDDQVAGLQVLNDGKWIAVNPQPGALVINIGDQLQALSNGKYRSVWHRAVVNSDRERMSVASFLCPCNSVELGPAKKLITDDSPAVYRNYTYDEYYKKFWSRNLDQEHCLELFRT</aaseq>

Gene Sequence

<dnaseqindica>1..213#310..557#4615..4939#5508..5750#ATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCGCACCCACGGCTTCTTCCAGGTATCATCATCATCAACACGAATTCCTCTCAACAATCTGCAGAAATTGCAGCTAAGCTGACGACGGGCTGATCAAAATCCCCGCGTGTGATTCCAGGTGGTGAACCATGGCATCGATGCGGCGCTGATCGCGTCGGTCATGGAGGTGGGCCGCGAGTTCTTCCGGCTGCCGGCGGAGGAGAAGGCGAAGCTCTACTCCGACGATCCGGCCAAGAAGATACGGCTGTCGACGAGCTTCAACGTGCGCAAGGAGACGGTGCACAACTGGCGCGATTACCTCCGCCTCCACTGCTATCCTCTCCACCAGTTCGTCCCCGACTGGCCCTCCAATCCGCCCTCCTTCAAGTACAAATTTCTATTTTGTCCCACCTCTCCCTGCACATTTAGTTACTGCATTCATGCTTGCTATTCGCCATTCAGTATCGGTTACTGCTAAAACACGTTTGAAATTGACTGCGATTAATTTATTTTTGGACCATTTCTACTCCCTTAGTTCTAAAATATAGGAGTAGCATATAGGAGCAACTTTTAGAGTTAAAAATTTATATCAGAATATAATAACTTCTCTGCCTATTTAATTTCACTCATCCAAAATCAATCACAACTATCGCATATTCAATTTTACTCGTATATTTAGAAGTGTAAAAAAAGTTTGAAAGTACTTATATTTTAGAACGGATGGAGTACAATTATTTTGCATGGACCACAGTACCTCTGTGGACAAAAGTATATTCTTAAAAAAATTTCTCTGCATTTAGGCTGTGTTCGCATATGCCGGTTACCAACCCAAATAGTACGCACGGAAAACGGAACGTCCATTAGCACGTGATTAATTAAGTATTTGCTAAAAAATTTTTCAAAATGGATCAAGATGATTTTTTAAAACAGCTTTCTTACAGAAAATTTTTACAAAAAGACGCACCGTTTAACAGTTTGAAAAATGTGTGTGAGGAAAACGAAGCAAGGGAGTTGGGAACTTGGAGTTCCGAACACACCCTACACCATTTCCTTTTGTAGTCGCACGTTAGCAAACATTTTTTTTACGCAAGTTAGCAAACATTTTCAAAAGGTAAATGGTTTGCTATCATTTAAAACATGACGCATTAGAGAGGATGAAGCATAAATAAACGTTTGGCCGGTCTATTACACAGACAGAAGATCAATCCTCAAGTCAGTCAGTCTATTCACATATCACAAGTTCACAAATCACAGGATATGCGACAAAGGATATCATCAATCTTGTCAAATTCTACATGGGAGGTCATGACAGAATGTAGGAATGCAAGCGGGCAACCCACTACCTGTATAAAAAACTGTCTGATAGTTTATTTACTACTTGCTACTATAAAATTTGAAAGAAAAAAATCAACTACAATTATAATAACAGGAAGAGAATAAACACCGCTTGCTCGGCCCACTTACATCCCTACAATATTGTTAAATGGAAAAAGATTCTGATGAGATTGAATCTATTGTACTGTTCCAGAGCTTAATAAAAGTAACATAGATTTATAATTTCACTGAATTTTACTTTGTAACCATATATAGCAATAGGATCGAATACCACATATATCAAATTGGCAGGATAATTTGAAGTAGGGACCACTAATAGTTGGAAAAGTAAAAGAACAACCTAGGCTCAACCTGGACCGCAACTGCTGGAATTGGCTGGTATTAGAACTGGAATTGGTAGGTGCCATAATTCCAAATTCCAGCCATTTCGGCCGGTACCAAAATGAAATTGATAACATTTGGAAATTGCAATGCTTATCACGCTAGCTTCTAAGCTTCATGCTCCGTGTCACCTTCCACTATGTATTTTTTTTTGAGTAAAGTCCATCACCGGTCTCTAAACTTGTACCGTTACATCATTCCGGTTCGTAAACTCGCAAATCGACCGTTCAGGTCCTCAAACTTGTTCGACTGTGTCATCCTGGTCCCTAAACTTGCAGATCACTCGTTTAGATCCTCCAACTTGTTCAGTTGTGTCACACCGGTCCCTAAACAGGACGGTCTAGAGACTTTATATCAAAAAATAATTCATAACTTTTTCATGTGAACTCTAATGAAGACAAACTTTATATCAAAATTGTAGCTCTCGATGCGACCTACAACTTTTTAGTTGAAAAGTTTTTGAATTAAAACTGTTTAGGGTCCCAAAATATTGTTGCATGTTTATAGATTTTGAAATTTTAATTTTAAAATTACATTTTGGGACAAAAAATGACTTAAAATAAAAAAATTCAACTACAAAGTTGTAGACCGCGTCAAGGGCTACAAATTTGATATAATGTTTATCTTCATTAGAGTTCACATGAAAAAGTTATAAATTATTTTTAAATATAAAGTCTTTAGACCGTCCTATTTGACTCAGATGATATTCAAATCCAAGTTTAGGGACCGGGGTGACACAACTGAATAAGTTGGAGGACCTAAACGAGTGATCTGCAAGTTTAGGAACCGGGATGACCCAGTCAAACAAGTTTGAGAACCTGAACGTTCGATTTGCGAGTTTAGGTACCGGGATAATACAGCGGTACAAATTTAGGGGCCGGTAATGAACTTTACTCTTTTTTTCTTTCACAAGTCAGAGTGAGCAATTTGCTCTCGAATACGTCTACTTTGATAAGGACTGAGATTGGCATGCATAACAACAAAACGATCCTTGATGTTACACGTACGGTGGAGCTTTTCAAGAATGTGCAGTCACTGAATCACCTAGCTAAAACCTAAGAGATATGCTCCCCTTTGCTTTTCTGAACATTTAGCGCGCACAAACGCAGATAGATACCTGAAGCCAAGAAAGAAACAAGAGAAACGAGCCATCAAAGGTGGCAAACAAAACCACGTGATTCAGGAACGTCGTCTCATAGTCTATATCAATTTGATTTTTTTTCCCGTAAACACGTAAAAGCTTAAGAGATATACTTGATAGTGCAGTGTCAAAGAGTGTGTGGTTTTAATCTTGTGGTCTCGTGTTCAATCTTTAACACGCTCACAATTTCTTCTTAGAAAATGTTTGGAAGGACGTCCCTCTCCAAATCTTGTTTTCTTTAACACGTACTCCCTCTGTCCTATAAAAAATCAACCTAATACCGGATATGACACATCCTAGTACTACAAATTTAGACATACATATGTCCAGATTCATAGTACTATAATATATCATATCTGGTTCTAGATTTATTTTTTATGGGACCGAGGGAGTAAAAGCTCTCCACGTTAATATATTAGAATAAGAGTTCAGCATCTAGCTAATGACCATATATTCTGCACTGTGCGTGGCCATGGTTCCACCATGTGCGCAGGTAGTTGTTAGTTGCGTGCACCGTGCAAGAAAAACAAGGTAGTTAGTTGCTTGATGCTCTCACAAATGTTTAATGTAATCGCCTAAAGAAATCAGAGCATGCGACACTGACATCGAAGACAATGCCCCGTTGCAATCTCTGGAATTGGAATCAGAATCCAAAGGTTACAGGGGTTGTAACAGGGGAGCGTATGCTATGCACACAGGCCCTCGTGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTCTAGGAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGTAAAGTCACATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAAAATTCTAACAAAATTGCAACCTTAAAACTGTCAGATTTTTTGTTTTTTTGTTACGGCTAAAATATAATGAATTTGATGTTAAGATTTTAACCCTAAGTGTAATACAATTGAAATTATGTGTATGATTTTTTCTAGATTTTTTTGTGACATTTTTTAGTTGGTGTGCACGTGTGTACACGTAAAGGCCTGTGTGCATAGGATATGTTCCCTTGTAACAGCGGCCACATCTTTTGATTAAGAAACCAAGAAGCACATGCATGGCCACATGTGAACAAGTGAGAATATACAAGGATAACCACAACGTGATCAACCACGTGCAGAAATATTTTTTCAAGATAACGTACTACTTGTCCAAAATCTATCCATGTCTGTCTGTACTCTGCAGGCCCATTCAGTTTTCAGTGATGACAGATGCTGTTCTTGGCATCTTAACTTGTCCAAACATACCTCACTTCAATACAGAGAATTTTCAATATAATTATTACTTATTCCTTCGTCCCATAAAAAACTAACCTAGTACCGGATATAGATTTGTTTAGATTTATAGTATTAGAATGTATCACATCCGATACTTGGTTGATTTTTTTATGAGACGAGAGAGTATCCCTCAACTCCCAAATATAGTAGTATGACAAAGTAGTACTTGTGGTATCTAATCATAGTATTAGGTTTTTATATTTTAGGACGGATGAAGTACTTAATTGATGAAGCGACTGATCGAATTCGTGATGACATTGCAGGGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATATCGGAGAGCCTTGGGCTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACATGGCGGTGAACTACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACACTGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCGGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAGGTGACCATTCCTCTCAAATCATCTTAGGCCTCTTTTCATATCTAAGATTGCAAAAACACTTAGACAGAAAAAACGTAGCAATAAAGTGACGATTAATAACACAAAAAAGTTTTAGAACTAACATTTCGATGACACATAGGAAGAACACAAGAAATTTTCAAGTCTTAGGAAACATGAGGTAGATCCTCATGATTTATTTCTTCCAAATTTTTCATGGATTGCTCCATTTTATAAGGGCTGTGTTTAGTTCACACCAAAATTAGAAGTTTGGTTGAAATTGGAACGATGTGACGAAAAAGTTAGAAGTTTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAGTTTAGAACTAAACACGGCGAAGGTTGAACCCTTTGATCTAGAGGTCTCTGTAAGAAAAATCCTAATATGATGCAAATTCTTCAAATTCCTCCACTTCTCAATTTGTTTCATAAGAGGGCTGAGAATCTTTCAGTAAAGCTGCATGTAGAACGTGTTGATGTCTGAAACTCTGAACCCTGAACATTAAATTGCTGCTGGTTCTGTCAGGCGCTGAGCAACGGGAAGTACAGGAGCGTGTGGCACCGGGCGGTGGTGAACTCCGACAGGGAGAGGATGTCGGTGGCGTCGTTCCTGTGCCCGTGCAACAGCGTGGAGCTCGGCCCGGCCAAGAAGCTCATCACCGACGACTCGCCGGCGGTGTACCGGAACTACACCTACGACGAGTACTACAAGAAGTTCTGGAGCAGGAACCTTGACCAGGAGCATTGCCTCGAGCTGTTCAGGACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033357