Os11g0120600

From RiceWiki
Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0120600| Description = Histidine triad (HIT) protein family protein| Version = NM_001072141.2 GI:297611125 GeneID:4349630| Length = 3156 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0120600

Description

Histidine triad (HIT) protein family protein

Version

NM_001072141.2 GI:297611125 GeneID:4349630

Length

3156 bp

Definition

Oryza sativa Japonica Group Os11g0120600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:904845..908000

Sequence Coding Region

904845..904950,905957..906093,906383..906481,906573..906675,907990..908000

Expression

GEO Profiles:Os11g0120600

Genome Context

<gbrowseImage1> name=NC_008404:904845..908000 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:904845..908000 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggcttacaagttcgggccgtacaagatcgacgcgagggaggtgttccactccacgccgctgtcctacgccatggtcaacctccgcccactcctccctgtgtgccccaagcgtgaagtgaaacgatttgctgatctaagttctaatgagattagtgacttatgggttaccgcaaaggaagttggtatacggcttgaacagtaccacaaagcgtcttcacttacatttgctattcaggatggtccacaagctggtcaaactgttccacatgtccacatccatgtcatccctagaaagaaaggagattttgagaaaaatgatgagatatatgatgcgattgatgtcaaagagagggaattgaaggagaaacttgatctggacatagagagaaaagatagaaccatgaaagaaatggctcatgaggccaatgagtaccgtgagggccattga</cdnaseq>

Protein Sequence

<aaseq>MEAAYKFGPYKIDAREVFHSTPLSYAMVNLRPLLPVCPKREVKR FADLSSNEISDLWVTAKEVGIRLEQYHKASSLTFAIQDGPQAGQTVPHVHIHVIPRKK GDFEKNDEIYDAIDVKERELKEKLDLDIERKDRTMKEMAHEANEYREGH</aaseq>

Gene Sequence

<dnaseqindica>1..106#1113..1249#1539..1637#1729..1831#3146..3156#atggaggcggcttacaagttcgggccgtacaagatcgacgcgagggaggtgttccactccacgccgctgtcctacgccatggtcaacctccgcccactcctccctggtaataatctcctcactcccccttgctcagttttaccacttgatcgatttactctctctaatcgcctccaatcccccttgttcagtaccacagtacagtcccaaaacttgtagcggaaattacagagacgggttaagtagcttgccattgctaatttgtttgatgaccagttcgcgaatcatactgtaactgccaaatgctaacaagcacgtttttttttcttgaaaagcacaatgtacacgcagatactagctagtctgttcacatataatagtgtttttctgcaattgatctcttcttctgcctaacagattcaccttaatacagtaccatttcaccgttataccatatgcgattccgtcaactttgaccttgctgttgctgcatgcatttaattcctgttatattgctatatattggttggttcatattctgctcttctttcttaaccatatcattccttattgtgcaggtcatatccttcaattgcaccaaaagagactgctactttttttctgcaaactgctgttttggagatatttgcagttgatttctttaacgtgccatactgctagctagttccgttgggattgtcgataaaatgagcttgcttttgctggcttgtgtttgggtaaagtttcatcaatgcattcaaagtaatagtaaatagatgggcctgtggaatttatttattcatgaaaggattgtgttggtttacccttctatacttgacaaatatcaagtctggcttaaggtcaattttgtggattggctgaagaggtgatgtaggtgtttattttgccgcatgtcatcttacttgattgatcatcttagaggatgtcatctttaccatgagattgatataactgtcaattgtactgccgtgttgagcaaatcttacataaatttattggttagccatcttcttttgatttatactgtggtatattgagaatatgatatatcttatatgttgttttcccttaacaatatacaaatgttctagtgtgccccaagcgtgaagtgaaacgatttgctgatctaagttctaatgagattagtgacttatgggttaccgcaaaggaagttggtatacggcttgaacagtaccacaaagcgtcttcacttacatttgctattcaggtaaggtctatgtatttatgccactgcaattagtaggaatttgtattttcattatttcaatgcttaatcataccatcaagaggagtaccatatgggttttgcttattgggggtctaaatatgatgatcttattgtgtgtggaataaaaaaaaaccattttcccatacaagtattcttaacttttttttaatcatttgccctagctataactttgcatgtctgtcttgaattatttttttaatataatagtaatattaagctatttactcattagttctagtgcttacaggatggtccacaagctggtcaaactgttccacatgtccacatccatgtcatccctagaaagaaaggagattttgagaaaaatgatgagatatatgatgcggtttgtggcatattcctcaatcgacctccttttatccaatacttgaacccaatatttaccacaaaattcttactcagttgctttctaatagattgatgtcaaagagagggaattgaaggagaaacttgatctggacatagagagaaaagatagaaccatgaaagaaatggctcatgaggccaatgagtaccgtggtctcttctcttagatgtaatttttgcgataaatttcttgtaaactatctctaaattgcagttactcttctccagaaattatttttgtaactgtttgtcatccatcatgggaattcaagtcttcgaatgatattatgaaattatctaatttggtacgatacttgtttgttgtaaaatgtgttctttcttataaatctttatctttgaaactagttatgccacggtgtggcagtagttgtttgttggaaaatttatatttttatgacagatgcccctgtaccatatgaaattacacagccatatattatcagtagctggctgggtcatactatggtttcacaatctacaaatagtaacaaaatacattgtattacctttcagtacctatttgaaagcctacttaaaagaaagaaggatcattcttttggtgttttggatcaaatagagttgcaatccatgctatcaacacattgcattaagtttcagctgaaaaattgacttttcttgagatttccgctgctcttcagttattcagacacagtattttggtcctttgatcatgctagttagaaagtgtgttctctcatgcttatgcggattgctgtgataaattatgtttttgtcatgttttgttgagagaaaagccagaaattcgacatggcatagtagctgacagtttgttagacaggatggataactcaactttctatctagctctttgtgctgagtcaaagtttttattccttctgccgactgtccataaagtttgtggtttagcagaatcttgcctaagtctaccatcttggatgcgatatattgtttttattaccttgttactgttagtctatgcatctagccaacattggaaaagttaacctgactcattaatacaataattctggcaatttgtggccaatggccgtagtcctggctaaactatatatcattctgacgcacctttctgataagatcatgaaaactttaatgatctgattgaaccatgaaaatactactttaattttgtatcattgtgtagtttttaccttttttgctgcttgtttttgtctcctgtgaacttttctttggttaagggactgttccatcaatcccatttaatctaatgttattagaacataagaggctctgattttgattagtctccagtgttaactcttgtgcttgctttacgcatatacattctggaagatagctcaagtaaagtaactggttagctcttaatctctttttgctgatttttttttctgggacttgagcacctttggtcattttcatctttgcatcatgcttgctaagagggccattga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0120600, RefSeq:Os11g0120600