BGIOSGA026474

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Revision as of 07:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026474, complete gene.| tag = P0543D1...")
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Gene Name

BGIOSGA026474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026474, complete gene.

LocusTag

P0543D10.30

Ensembl Transcript ID

BGIOSGA026474-TA

Ensembl Protein ID

BGIOSGA026474-PA

Length

6978

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:30133082..30140059

Sequence Coding Region

30140046..30140059,30139325..30139469,30137882..30137938,30137755..30137814,30137575..30137660
,30134354..30134498,30133266..30133325,30133082..30133171

Genome Context

<gbrowseImage1> name=IndicaChromosome08:30133082..30140059 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:30133082..30140059 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACTCTAGGAGGGACTTTCGCAGCCACAGAGCTGCTTTATTTGATGGTATTGAGGAGGGTGCGATCAGAAGTTCAGCTTACTCTTCTCAAATTCATGAGCATGAGAATGACCAAGCTATGGACAGTCTGCATGACAGGGTCAGCGTTCTCAAAAGATTGACAGGAGATATACATGAAGAAGTGGAGAATCATAACCGAATGCTGGACAGAATGGGTAATGATATGGATGCTTCCAGAGGATTTCTATCTGGAACGGTGGACAAGTTTAAGATGGTTTTTGAGACCAAAGCAAGTCGCAGAATGGCTACCATGGTGGCTTCTTTCATTTCTGTCTTCTTCCTTATATACTACCTAACCAAGGACTTTCGCAGCCACAGAGCTGCTTTATTTGATGGTATTGAGGAGGGTGCGATCAGAAGTTCAGCTTACTCTTCTCAAATTCATGAGCATGAGAATGACCAAGCTATGGACAGTCTGCATGACAGGGTCAGCGTTCTCAAAAGAGGTAATGATATGGATGCTTCCAGAGGATTTCTATCTGGAACGGTGGACAAGTTTAAGATGGTTTTTGAGACCAAAGCAAGTCGCAGAATGGCTACCATGGTGGCTTCTTTCATTGCTGTCTTCTTCCTTATATACTACCTAACCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MNSRRDFRSHRAALFDGIEEGAIRSSAYSSQIHEHENDQAMDSLHDRVSVLKRLTGDIHEEVENHNRMLDRMGNDMDASRGFLSGTVDKFKMVFETKASRRMATMVASFISVFFLIYYLTKDFRSHRAALFDGIEEGAIRSSAYSSQIHEHENDQAMDSLHDRVSVLKRGNDMDASRGFLSGTVDKFKMVFETKASRRMATMVASFIAVFFLIYYLTK</aaseq>

Gene Sequence

<dnaseqindica>1..14#591..735#2122..2178#2246..2305#2400..2485#5562..5706#6735..6794#6889..6978#ATGAACTCTAGGAGGTCAGTCTCCCAGATCCCCTACCTCTTCAGTCTATTCATTTCTCTTGTATTTGTTTTGTTGATTTACTCACTCACTGACTTGATTAGTCAGTTCATTCATGAATTGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTAGCCCCTGCCTCTTGCATATATGCATTTGTCCATTTCGTTCATCATGCTTATCCCCTTATCCAATCTTACCGTACCGTATGATGCCTCTTTAGTCTTTACTGATTTTCCACAAATTAAAATACCCCCTTTTTCATTTAACATGTCATGATTCATAAAAAAAATTATAATATAATCTCATGGAAACTTACGAAAATACAACACATATGAAAATAATAATAATTAAACTGTTTGTTTCTACTCTGCTACTTTTCAATCACTGGAAGTAATTTTTCTCAGCTAACGGAAGTGACGCATGCTAGACAGTACTAAAGTTGTCCAGAACACGGTAGTAATGCCTTTTATATTCATTTGGCCGTTTGCAGGGACTTTCGCAGCCACAGAGCTGCTTTATTTGATGGTATTGAGGAGGGTGCGATCAGAAGTTCAGCTTACTCTTCTCAAATTCATGAGCATGAGAATGACCAAGCTATGGACAGTCTGCATGACAGGGTCAGCGTTCTCAAAAGAGTACGTATGATGTATTTCTTTTCTCTCCAAAGTTTACTTGCTGAATTGAGCTATGTGCAACACAATCCTGGAAAGGTTTTCAAAACCTCAATTACACAAACCCCCGTACTACTGCAAAGGGCTAAATTGTTCCGTCTGATAAGATCATTGAGTATACAACAATGCTTGGAGCATTTTTTAAGTTAATGTTTGGGTTAGATCGTGTTGTACCATAATACCAAAGACGGAATTTCTGAGCTACCAAAAGAGTATGACAGGGTCAGTGTTCTCAAAAAAAGTACATATGACGCACTTCATTTCTCTGCAAAGTTTGCTTCACATATTGAGTTATGTGCAATACAAACCTAGAAAGGTTTTTACTACCTCATTAACACAAAAACCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAATTGGCACGACCTAGAGCAACCACGGTTAGATGGCCAGCTCCGGTAACACCGGCTTTGCAGGTTGGGGTTAGATCGTTTTGCACTATATAATACCAAGGATGGAGTTTTTATCGAGCTGGTAGAAATAAAACGGCTTAATTTGGAATTATTTACTGATGGCCCATGACTTGTTTTCGTGCTAACTGCAGAAGGTGACTACTTATAGCTTTGTACAGTAACACGGCAAGAGTTGGGCACTTTCTTGTGTATTTGCTAGTATAAATTTCCAGATTGTCTGACATATTTTTCTAGGGAGAAATGACCCCAATTTTGTCCATCAAAGAAAAATATAAGGACGGTCTGAACATCTGAATGTGAGATCAACACATTCGAGAATCCAAAATAGCATTATAGAAACAGCTAGAAAAGAGGAATAAAGACATATCATTCAAGGATAAATTATTCCACTGTTCCAGCCTCCAGGAGGTCCCGACGCATCGTTAATAGTCCTTAGCTCACTGCAAATATTTTGTTGTGAGGAACATGGCGCAAAGTTCACTGCAAAATTTACCATATGTTATTTTCCTTAGTCTATGATTCACTCCTTATGTAATTAAGTCGCCCCTTCCCTCCTCTTTCTCTCTCGACGGACTATGATCCATTGTTAATAACTTTTTATCTTTATTTTTCTCCTCCTAATATAACCGGCAGTCCTCCTGCCATATACCATTTCAAAAAATTAGTATGATGGTTATTGCATGTGGATGATCTGAATATCAAAAGTAAACAGCGCTGCATCTTTTAGCTTTTGTATGTTATTGTTCTCAAGATTTTGCATGCTAGATCACAATGTAATCTTCATATGTGCTTATAGCCATTCTAAACTTACTGTACCTTTGATGTGGTTTGTCTCTTCAGTTGACAGGAGATATACATGAAGAAGTGGAGAATCATAACCGAATGCTGGACAGAATGGTACTAATATCCTGCAAGATGCTATCTTTCTTGTCACTACTCTCTAATGCATTTCTTTGCTATTTAGGGTAATGATATGGATGCTTCCAGAGGATTTCTATCTGGAACGGTGGACAAGTTTAAGATGGTAATGAATTAAGGAGTTCCTATCTCCACGTCATGGGCTACTCCTTAACTGTTCTGTTATTCTTACAATTGCTCTTTTTTTTTTCTTACTTCAGGTTTTTGAGACCAAAGCAAGTCGCAGAATGGCTACCATGGTGGCTTCTTTCATTTCTGTCTTCTTCCTTATATACTACCTAACCAAGTAGAAGAATTGTCTGACTCTGCCTTTCATTTTCCTCTTGCTTGCACGTAAAGTACATGGCTGACGGTGTTTATCAAGTTTTGTGCACTTGATGACCGAACATTTGAGAATTTTATCTCAAACTGTGTGGATTGATTGTAAGGCGAGCTGAACGTTTTCTGAATGTGGTGAGAACTGTTGTAAAACTTTGTGACGGCAAAAGATGAGTTACGAGTTGATGATATATGCCCTCGTTGGTGGTGCTACACTTGTGCCCATTTCAGCCATCGTTGTATGCAAAGCAGCATTTGGATTCGCTTCACTCACTGCAATTGTTCTGCTGAGATTTTACTGATTTGCTAGAGAAGAGAAGATGCTGTGTGTCTGTCGATGGACTGCCTGCAAGTGGCTGCTGCAAATGTCAAATGGCGACTTTGTCCTGCTGATTGTTACACTGGACACCGAATGAATGAACGAAGAGTTGTGTTGTTTTGCTCTTCACGCTATTGCGAGTTGACGTTCCAAGAGAGACTGTGCCCCTGCCAAGTTTTTACTGTGTGTTAGGCCCCCAAACATGGCCACCAAGTTGTTGTATCGATCACTGAAGACTTCTTGAGTTAATGATGTCACTGTGTGCTACACGTCTACGTACTCCCTCCGTCATCACAAAATAGTAGCATGACATATCCTGGACAAACGAATGTGTGTCATATCCCGTACTCCTTCTGTTTCAGGTTATAAAATATTCTGACTTTGTCAGATTATAAAATGTTTTGATTTGGATCAAAGTCAAACTGCTTTAAATTTGACCAAGTTTATAAAAAAATAGTAATATTTTTTATCTAAGATAAATTTATTATAAAAATATATTTAAGTATTAATTTAATAAAATCAATTTGGTAATATAAATATTATTATATTTATCTATAAATTTAGTTAAATTTAAAACAGTTTGACTTTGATCAAAGTTAAAACATCTTATGACCTAAAACTACTATATTTATTTATTTTAAAATGAAAGGAATACGGGTGAATTGTGATGTGATCCATCATGTTAGCATCCAGAAGCCGGATGAAACTTCTGTGCATACTTCTTGTGGTTCCGAAAATTGCACAAATCCTAAAGTACTCCTTGCTTCCTGCCCGTACATAATTAAGAAAAATTCGACCATCCTAAGGTTGTCCGATTAATGTATTTGCTGCTAGCCTCACCTCTCCGATCGTCTCTCCTGTCTCATCCATTTTACAATTCCAACTGGCCATTCACGGGCCAAGGGAGGTGATTAATTACTTGATAATGGATAGTTTAATCCAAACAACGCAACTAATGCAGCAAAAGGCGCACGATTTAATCAGCAAACTAGAAAGGCAGTAGTATTATTCATCTAAGAATATGAGAGATTCCAAATATTAACTGAACATATTTACAAAAAAAAAATCGTTGATCATTGCTGCAGTTGAGATTAATTTGCTGTGAATACATATAGTGCTGTCTTTTGACGTGTTGCGCTAACCAACAAGTTTTTTTTTTTTTGAGGAAAGCGCTAACCAACAAGTGAAGCTAGCTTATCTTAATACAGTAATCTAATCCGGCATGACCTGTCGTAATTAACAAAACAAAGTTCATGGCAATGAAGCCTTGCATGCAACTTGTGTCCCCGGACCACCATTACATTAGGAGGCTAGCTACAGGAATCTGTGCCCTTTTATATTAGTGGGAGCTGTCATTAAAGCTAATTAACACTTTTTTGATCTCCTTTCACGCATCATTAGGAGCTTTGTATGGCCATTGCCAATAAAATTACCAGTCAATCCATGGTCTTAGCTTAGCTACTAGTATAGGTGTTTGTTGGGTTCATCACAACCTAGAGTCTAGGTACAGTGTTCTGCAAATGGCTGCTTGTACTTTACTATATGCCCTCTCAGTCCCATAAAAAACCAATCTAGTACCTAATATGATATATCCGTACTACTAATCTTTACATAACAAAAAAGATGAGACAGCTAGTAATAGTACTACTAAGACTGTTGAGATAATCGTAAATTAATGATTAAATTAAACTGGCATGCATATGCTTTGGTATATATAAAATGATGAACGCAACGAGAGCAATGTGCATATATATGTTTTTTTTCAGATCGAGTAATTAACTTTGTCGAGGAGTGACCCTCTCTTGCGGGAGATCGTGAGACCCCCCCTTTCGTGAGTTCGGCCGGGAGAAGAAGCTCGCCTCTAGAAATCGCGTATCTGTCCCCAAGGCTCCTAGCTAGCTCGCACACAACCAAATTATACAGGTTCGGGCCGCTATCAAGCGTAATACCCTACTCCTGTGTATGGGATTTAGACTGAGAGTTACAAGGGTTCCTAAATTCGGGAGAACACTCTTACTTCCCTCCTCCACAAGCTCAGGTTTTCTGAGAGTCGTCCCCCCTCTCGGTGGGCAAAGTCCTTCTTTTATACCTCAAAGGGATACCACATGCACCGCCTCTACCTACTCTTCTTTCGGGTGGGGACCCACCCTATCTTGACTGGAACTCGACCCGTGCCTTCGCCTGGAAGCTAAACTACAGCTTATCCTTGAGCGGGGCCCAGCGCCGTCCCTCGCCTGACACGGGGGACAACCCTGTCATTCCCTCATTAATAGGTGAAGACTTGTGGTGGCCGCCGTCCGAACGACCCCCCGATGGGACGGGTCATACCTACCTCCACTCTGCCGGAAGCAGATGCAACGTGGGAGCACGGTTGTCCGTCCAGTCAGACGTGACCGGCGTCAGGCCGGTCACAGACCGGTCATTCTTGACCATCGCGCGTCAGTTTAGCACGCCGCACGTCTGCCCCACTGCATTAAATGCGACATGGGCCAGTTGGGGCGTTGCGCGCATTAAAGGAAGTTCAGCCTGGGCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACGTTGTTTCTACTCTGCTACTTTTCAATCACTGGAAGTAATTTTTCTCAGCTAACGGAAGTGACGCATGCTAGACAGTACTAAAGTTGTCCAGAACACGGTAGTAATGCCTTTTATATTCATTTGGCCGTTTGCAGGGACTTTCGCAGCCACAGAGCTGCTTTATTTGATGGTATTGAGGAGGGTGCGATCAGAAGTTCAGCTTACTCTTCTCAAATTCATGAGCATGAGAATGACCAAGCTATGGACAGTCTGCATGACAGGGTCAGCGTTCTCAAAAGAGTACGTATGATGTATTTCTTTTCTCTCCAAAGTTTACTTGCTGAATTGAGCTATGTGCAACACAATCCTGGAAAGGTTTTCAAAACCTCAATTACACAAACCCCCGTACTACTGCAAAGGGCTAAATTGTTCCGTCTGATAAGATCATTGAGTATACAACAATGCTTGGAGCATTTTTTAAGTTAATGTTTGGGTTAGATCGTGTTGTACCATAATACCAAAGACGGAATTTCTGAGCTACCAAAAGAGTATGACAGGGTCAGTGTTCTCAAAAAAAGTACATATGACGCACTTCATTTCTCTGCAAAGTTTGCTTCACATATTGAGTTATGTGCAATACAAACCTAGAAAGGTTTTTACTACCTCATTAACACAAAACCCTGTGCTACTGCAAAGGGCTAAATGGTTCAGTCTGATTGGATCGCATTGTGTGCGATAATGGTTGTAGCCGTTACAATAAGGTTAGGGTTAGATTTTTTTTGAGAAGTGCAAAAAGATAATGAAACACTGGTGCCTATTCTCGCTATACAAATTGGCACGACCTAGAGCAACCACGGTTTAGATGGCCAGCTCCGGTAACACCGGCTTTGCAGGTTGGGGTTAGATCGTTTTGCACTATATAATACCAAGGATGGAGTTTTTATCGAGCTGGTAGAAATAAAACGGCTTAATTTGGAATTATTTACTGATGGCCCATGACTTGTTTTCGTGCTAACTGCAGAAGGTGACTACTTATAGCTTTGTACAGTAACACGGCAAGAGTTGGGCACTTTCTTGTGTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGTTTGTCTCTTCAGATTGACAGGAGATATACATGAAGAAGTGGAGAATCAGTAACCGAAGTGCTGGACAGAATGGTACTAATATCCTGCAAGATGCTATCTTTCTTGTCACTACTCTCTAATGCATTTCTTTGCTATTTAGGGTAATGATATGGATGCTTCCAGAGGATTTCTATCTGGAACGGTGGACAAGTTTAAGATGGTAATGAATTAAGGAGTTCCTATCTCCACGTCATGGGCTACTCCTTAACTGTTCTGTTATTCTTACAATTGCTCTTTTTTTTTTCTTACTTCAGGTTTTTGAGACCAAAGCAAGTCGCAGAATGGCTACCATGGTGGCTTCTTTCATTGCTGTCTTCTTCCTTATATACTACCTAACCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026474

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026474&oldid=32731"