BGIOSGA026491

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Revision as of 07:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026491| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026491, complete gene.| tag = P0562A0...")
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Gene Name

BGIOSGA026491

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026491, complete gene.

LocusTag

P0562A06.8

Ensembl Transcript ID

BGIOSGA026491-TA

Ensembl Protein ID

BGIOSGA026491-PA

Length

4359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29902235..29906593

Sequence Coding Region

29906398..29906593,29906089..29906290,29905869..29905989,29904955..29905017,29904794..29904868
,29902235..29903479

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29902235..29906593 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29902235..29906593 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGGCAATAAGCAGTCCCTGATATACAGCTTCGTGGCCAAGGGCTCCGTCGTGCTGGCCGAGCACACCGCCTTCTCCGGCAACTTCAGCACCATCGCCGTCCAGTGCCTCCAGAAGCTTCCCCCCAACACCTCCAAGTCCACCTACTCCTGCGATGGCCACACCTTCAACTTCCTCGTCGACCGCGGCTTCGTGTTTCTCGTCGTTGCGGATGAGGCCGTTGGAAGGAGCGTGCCGTTTGTGTTCCTAGATAGGGTTAAGGAAGACTTCATGCAGCGGTATGGCTCCAGTATCGACGAGGAGGGTCAACACCCGCTCGCCGATGATGCAGATGATGATGACTTCCTCTTGGAGGACCGATTTAGCATCGCCTACAATCTTGACCGGGAATTCGGACCGAGGCTGAAGGATCACATGCTGTATTGTATTAATCATCCAGAGGAAATTAGCAAGCTCTCCAAAGTGAAAGCACACCTCACGGAGGTCAAAGGGATTATGATGGACAACATTGAGAAGATATTGGAACGTGGAGAGAAGATTGAGCTTTTGGTCGGCAAGACTGAAACCTTACAATCACAGGCTGACAGCTTCCACAGGCATGGAAGAGAGCTCAGGCGTAAGATGTGGCTTCAGAACCTGAGGTTTAAGTTGATGTTTGAGCACTTCTCTCTGAAACAACGAAGTGAGCCGCAGATACAAGCCTTTAGGGATGTGGTCCAGAGATGTGAACTCCATGATCTGGGGTTCTCGGGGGTGCCATACACTTACGATAACAGGAGAGAAGGCCGCGGCAATGTTAAAGTGTGCCTAGACCGCGCCCTTGCAGATGATGGGTGGAGGGGACTGTTCTCTACAGCACAGGTGTTTCATCTGTCCTCTCCTAGATCAGACCATTGCCCCATCCCTGTCAAATTTTATTCTGAAGATCTTCGCAGGAATTTTGCGAAGTGTGTCCATTATGAAATTTACTGGGAAAGAGACCCTGCAATCTCTGAAGTTATAGCAGAATCTTGGGGCATTTCCGGAGCTAAGCAGGATCTGAGCGACACTAATCAAGCTCTGTTTAGGATGATGTCTAACCTTCGCACATGGAGTAAGAAAAAGTTCAGGAATGTCAGCCGGGAGATTGAGAAAACTAGAAAGAAACTATCTGAACTTCTTCTAAGTAATACCGACAGCATGGAAATAAGACGGGTGTCTGATCAAATGAACGAACTTCTGTACCGTGAGGAGATGATATGGCTGCAACGATCTCGAATTGCTTGGCTGAAAGAAGGTGATAGAAATACACGTTTCTTTCACAGCAAAGCAGTGTGGAGAGCAAAGAAGAATAAGATTACAAAGCTACGGGATAGTGACGGTACTGTTCACAGTACGACAAAAGAGTTGGAAAGCATGGCAACTGAGTATTTCCAAAGGCTGTTCACTGCCGACCCCAGCATTGATCATTCGAGAGTCACTAGCCTGATAAAGCCGAAAGTCACGGATGCGATGAATGAGGAACTATGCAAAACCGTCAGTGAAGAGGAAATTGCAAATGCCCTGTTCCAAATTGGTCCATTAAAAGCACCCGGGCCAGATGGATTCCCTGGTCGGTTCTATCAGAGGAATTGGGCTATACTAAAGGACGACATTGTGCGAGCAGTACAAGAATTTTTCTCTTCGGGTACCATGCCTTCGGGGGTCAATGAGACTGCCATTGTTCTGATACCGAAAACTGAGCAACCACAGGAACTAAAGGATTTCAGACCTATCAGTTTGTGCAATGTGGTCTATAAAATAGTGTCTAAATGTTTGGTGAACAGACTAAGACCAATCCTGGATGATCTGGTGTCGCAGAACCAGAGAGCTTTTGTCCCTGGTAGATTGATAACAAATAATGCCGTGATAGCATTCTAA</cdnaseq>

Protein Sequence

<aaseq>MNGNKQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDFLLEDRFSIAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMFEHFSLKQRSEPQIQAFRDVVQRCELHDLGFSGVPYTYDNRREGRGNVKVCLDRALADDGWRGLFSTAQVFHLSSPRSDHCPIPVKFYSEDLRRNFAKCVHYEIYWERDPAISEVIAESWGISGAKQDLSDTNQALFRMMSNLRTWSKKKFRNVSREIEKTRKKLSELLLSNTDSMEIRRVSDQMNELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLRDSDGTVHSTTKELESMATEYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQRAFVPGRLITNNAVIAF</aaseq>

Gene Sequence

<dnaseqindica>1..196#304..505#605..725#1577..1639#1726..1800#3115..4359#ATGAACGGCAATAAGCAGTCCCTGATATACAGCTTCGTGGCCAAGGGCTCCGTCGTGCTGGCCGAGCACACCGCCTTCTCCGGCAACTTCAGCACCATCGCCGTCCAGTGCCTCCAGAAGCTTCCCCCCAACACCTCCAAGTCCACCTACTCCTGCGATGGCCACACCTTCAACTTCCTCGTCGACCGCGGCTTCGGTAACACCCCTCTTCTTCTTATTCTTATCTTTCTGTGGGAACTGAACTACAGTAGTTAGTAATTGTGATATCTGTTGAGCTCACTTGGGTTATTTTGGGGGCTGCAGTGTTTCTCGTCGTTGCGGATGAGGCCGTTGGAAGGAGCGTGCCGTTTGTGTTCCTAGATAGGGTTAAGGAAGACTTCATGCAGCGGTATGGCTCCAGTATCGACGAGGAGGGTCAACACCCGCTCGCCGATGATGCAGATGATGATGACTTCCTCTTGGAGGACCGATTTAGCATCGCCTACAATCTTGACCGGGAATTCGGGTATGAAGTCACCATATGCTGTGCTACCTACATATGATGTTTCTTTCTTTTACTAGTATCAAATGTGTCTTTAACATGTGTTTTTGTGTTTGGGTATAGACCGAGGCTGAAGGATCACATGCTGTATTGTATTAATCATCCAGAGGAAATTAGCAAGCTCTCCAAAGTGAAAGCACACCTCACGGAGGTCAAAGGGATTATGATGGACAACATTGAGAAGGTATGTGCTCAAAACAGTGCTTTCTTTGCTGAAAGAATATAGTATATTGTGTACGGAAACAATTGTTGTGTAAGTAAGGTTTCCCAAAAACTCTGGATTATATTGTTCTAGACACCTAACAGTTCCCCTGTTCTATTCATGTATGGTCATATTTCTGTGTGATTTATTTCTTTGATGAAGTAAACGTGGATATCATGTCAGGGTATGATGTAAACATGTTTCACCTTTTCTGCTCAATGAAAAATCGCGTAAACTTGTTTCACCTTTCCTGCTCAATGAAAAATTGCAAATGGAAACATTTTCAATAGTTCATGGGCCACATCCCATGCTGCTTGGAAGTTCCTGCAGAATATTATTACTGTGTGCAGTCTATGTTGCTATGCATAGAAGTGCTCTGGTGTCTGTTGGTGTGATTAATTTACAAATTGAACAAGTAATGATGGGATCTTGAGTTTTAAAATAAAGATCAGTTTTCCCCCCCTTTTTGTGAGTTAGTACATACTGTTGTCATTGTGGTGATGAATCGTCTGCTTATTGTTTTGCCCACGTATTTGAACTTTTTTTTTGTTACAAAGTCTTCACTATGACAGTATGGTTATTGGCACGCTAGTTTCAATACCTTGGGATATAGGAGTATCATTTTAGTTATGCTGACTTTCCAATATAGAAACCCATGTCTAGTACTCCTACCCAGTATGTAATTAGTCAGTCTGGCATTTTACAGGAAGCCAGAGAATGCAAACAATATTTGTGGCCTCATGTCATTTTAGTATTTAACTGAATACAGAAAAAATAAACTCCTTTCTTGATGTTTCATACTACTGACTCTTACTGTCCTGGATTTTGTATAGATATTGGAACGTGGAGAGAAGATTGAGCTTTTGGTCGGCAAGACTGAAACCTTACAATCACAGGTATGGAAAATCTGTGTGAAATTTTTGTTTCTGTAAGAATGTTTAAGTAACCATGACTAAGTGGTGTGTTTTCAAATAATCTTCAGGCTGACAGCTTCCACAGGCATGGAAGAGAGCTCAGGCGTAAGATGTGGCTTCAGAACCTGAGGTTTAAGTTGATGGTGGGTGGTGCTGTTGCGGCGTTGATTCTCTTCCTCTGGCTGATTATTTGCGGGGGCTTCAAGTGCTAGAACATTGAAAGCCTTTTTCTTTTTTTTGCATTCGATGTGTTTACCGTGTCGTGTGCATATATAACGACCAGCAAATCCTGCTTTCGATATGCTTCGTGCAGAGTTAAATCTCCTTATGGACCTTTATTCCTTGTAGCCTGTTCTCATGTTTCATAGTATTACAATAGGGGGGCTCTGGAAATGGAATACTTGTGTAAACAAACCTTGTGAAAGGAGACAACTTAGCTATCTGTATTATGTACATTCTGAAATGCTAATAGCTTATTTCAATCTCATTTTCATTGGTCATTCTCAGCTGGTGTCCTAAATGTTGATTGCGTACCGCGCGTCTGCGCCAGATCATTTAACTCGCTATTCATATTCTGCAATTAATCGATTCTTTGAACTGTAAGGGTCTATCTCAAGATTAGGATGGCGCACCGAATTTCTGATTGCATGAAAGATATAGTTTATCTTCACAATTTGCAAAGGGAGAAAGGCTATATATGTTGATATGCACTCTGCTTCTATCAATCCCTCCCGTGCTATGTTTAGCGGTGAAGCAGGTGTGGATATACCTCAACTGACAGCATATGATCAGTTAAACTGAATTTCATACGGAATGAGTTAGACTGACTATGCCTAATCACTTTCATTGCTGCCCTTTTTTTTCTCCCTCTTCTAGCGTTGCGAGGTAAATGTATTAGTTAGAGAATTCAAGTTCCTGTTATATAAATTTATAAAAATTACGGAACTGGAACAACACAAAGGGTGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACACCCCGTTGTTTTTTTCCCAATTTTGCTTCAACGGATGACCAATTGCCTGTGCCATTTACCTGAGTCTAATTAGCAGCTATTTTTGACTTTTATTTTTCCCACCTTGTTTGTGCATGCAACCGCGTATAGAAATATTTTCACAAGATAGGTATGTCTTGTTTGAACCAAATATGGGTTCCGGCACTTTGTATCGCCAATTCTGAGATATCACCATTTTTTGGTGGAAATAATAGTAGCCAAAATTGTCTAAGTACGAGTCTGTACAACATGGTACAGATTGGAGGTTAAAGCAAAACCAGTTTACTTGTGTGAACATAGTTGTGCTCTGGTTAGGGTCCATGTGATAAAAATCATAGGGTACGTACGTTTGATGGTTAAAGAAGGTACCCGTGGTTAGTGGTGGGTGATTTTAATGAGACTCTTTGACAGTTTGAGCACTTCTCTCTGAAACAACGAAGTGAGCCGCAGATACAAGCCTTTAGGGATGTGGTCCAGAGATGTGAACTCCATGATCTGGGGTTCTCGGGGGTGCCATACACTTACGATAACAGGAGAGAAGGCCGCGGCAATGTTAAAGTGTGCCTAGACCGCGCCCTTGCAGATGATGGGTGGAGGGGACTGTTCTCTACAGCACAGGTGTTTCATCTGTCCTCTCCTAGATCAGACCATTGCCCCATCCCTGTCAAATTTTATTCTGAAGATCTTCGCAGGAATTTTGCGAAGTGTGTCCATTATGAAATTTACTGGGAAAGAGACCCTGCAATCTCTGAAGTTATAGCAGAATCTTGGGGCATTTCCGGAGCTAAGCAGGATCTGAGCGACACTAATCAAGCTCTGTTTAGGATGATGTCTAACCTTCGCACATGGAGTAAGAAAAAGTTCAGGAATGTCAGCCGGGAGATTGAGAAAACTAGAAAGAAACTATCTGAACTTCTTCTAAGTAATACCGACAGCATGGAAATAAGACGGGTGTCTGATCAAATGAACGAACTTCTGTACCGTGAGGAGATGATATGGCTGCAACGATCTCGAATTGCTTGGCTGAAAGAAGGTGATAGAAATACACGTTTCTTTCACAGCAAAGCAGTGTGGAGAGCAAAGAAGAATAAGATTACAAAGCTACGGGATAGTGACGGTACTGTTCACAGTACGACAAAAGAGTTGGAAAGCATGGCAACTGAGTATTTCCAAAGGCTGTTCACTGCCGACCCCAGCATTGATCATTCGAGAGTCACTAGCCTGATAAAGCCGAAAGTCACGGATGCGATGAATGAGGAACTATGCAAAACCGTCAGTGAAGAGGAAATTGCAAATGCCCTGTTCCAAATTGGTCCATTAAAAGCACCCGGGCCAGATGGATTCCCTGGTCGGTTCTATCAGAGGAATTGGGCTATACTAAAGGACGACATTGTGCGAGCAGTACAAGAATTTTTCTCTTCGGGTACCATGCCTTCGGGGGTCAATGAGACTGCCATTGTTCTGATACCGAAAACTGAGCAACCACAGGAACTAAAGGATTTCAGACCTATCAGTTTGTGCAATGTGGTCTATAAAATAGTGTCTAAATGTTTGGTGAACAGACTAAGACCAATCCTGGATGATCTGGTGTCGCAGAACCAGAGAGCTTTTGTCCCTGGTAGATTGATAACAAATAATGCCGTGATAGCATTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026491