BGIOSGA026493
| Gene Name |
BGIOSGA026493 |
|---|---|
| Description |
cDNA clone:J023090L01, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA026493, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA026493-TA |
| Ensembl Protein ID |
BGIOSGA026493-PA |
| Length |
5774 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:29891138..29896911 |
| Sequence Coding Region |
29896853..29896911,29896652..29896781,29895649..29896250,29895423..29895561,29895222..29895319 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome08:29891138..29896911 source=RiceIndica08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome08:29891138..29896911 source=RiceIndica08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGTCGTCGCGGCAGGACAAGGAGAAGGCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGGCAAGCCTACGCTGCTGTTGCTCTTTCATCATGTGTTTGCCTCTACCAAAGGGTTGCTTATTGTTTGTTTTCCTTTCGTCGAAATACTTGCAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGAAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGCTAGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTCGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCTCAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTGCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGTGGTAGACTAAACTCTCTTGGTGACGCCGCTCGTGGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGATCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MSSRQDKEKAVNVQVLLRCRPFSDDEVRSNAPQVITCNDYQREVAVTQTIAGKQIDRVFTFDKVFGPTAKQRDLYDQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECRRAKASLRCCCSFIMCLPLPKGCLLFVFLSSKYLQSGPKGQLPADAGVIPRAVKQIFDTLESQNTEYSVKVTFLELYNEEITDLLAPEEISKAALEERQKKPLPLMEDGKGGVLVRGLEEEIVTNASEIFSLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPSVHCLEETLSTLDYAHRAKSIKNRPEVNQKMMKSTLIKDLYGEIDRLKAEVYAAREKVGVYIPKDRYQQEENERKAMADQIEQMTTSLEANQKQINDLQEKYDSELQHSADLSKKLEATEKCLDHTSNLLSTTKEDLKQAQYNLKEKDYIISEQRKAENALIQQACLLRSDLEKSNRENAALYSKIARGDKLNAANRSVVNSFQADLASKLDILSTTLATSIDQQNKHLKSVENLCKSCVDSHDTATSEIKKKILASKALYMSHMEAFQNVVLLHKANSNSTLEDISSLSAASCCSLDQLLACVEGEAQKIFGDIQNLLADHRSEVAHFTQELRESFRISLDRTKDMSSFILGLFDKYVEETSKLQSHSNHTHEAQVKSLEDFQKAYEEQSKSEEQKLLADITSLVSKHVTRQRELVGGRLNSLGDAARGNKAFLDEHTSAMEVVTKDAKRKWEMFAEQAENDCKVGSNFSAAKHCRMETILQECACTVDTAAQQWKASHATVNDLCRKQIAEVEALVRSAIETNEQHEAEIASSRATAEEHASNSSKDLLQDVDNMLQEARNSSSRVVSTVEAHLGEIQHLQESHSSHTAGINTHADNAFQSSYKDYEPTGETPVRSEPEVPSKDAIESLRAMPMESLMDEFRENHPYEPSKDRRPSLIPRSPLATINN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..59#131..260#662..1263#1351..1489#1593..1690#1769..1925#2199..2268#2347..2423#2587..2640#2713..2793#2873..2984#3068..3154#3252..3427#3536..3697#3802..3909#4005..4163#4235..4318#4480..4685#4771..4872#5127..5236#5331..5482#5580..5774#ATGTCGTCGCGGCAGGACAAGGAGAAGGCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGTACGCCCGCCGCGCGCCCTCCCAGATCTCCCCAGATCCGCCGCCCCTAACTTCCCCTCTCTCCCGCGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTCGCTTCCCATCTCCTCCCAGATCTGCCAAATTTTTAAATACTGGATGCCTCGGTTTACCTGCTCTTGTGCTCTAGTTTTAGTACCCTTTCAAACTTTTAAATTATTTGGATGAGTCCAAATTCTGCGAAATGCGTACCGAGGTTTTCGTGATTGGTCCGGCGATTTGGACGGTAACTATTCAGTGGCTAGGGTTTCTTAGGTGCATTCCAACGGGCTGAATCTGCATTTGGCTGGAGTTGGTTCGCAATTAATAAAGCATCTGGTTTATACAAGATAATATAAGAAAAAAAAACAACACAGGAATGTGTTTCCCCTTGTTGGAGTTGCTGTGGAATTTATTTCATTTCCGGTTTGGCCGCACAGTACAGAGTTCTAATATGCAGCCGTTTTTCTTTCAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGGCAAGCCTACGCTGCTGTTGCTCTTTCATCATGTGTTTGCCTCTACCAAAGGGTTGCTTATTGTTTGTTTTCCTTTCGTCGAAATACTTGCAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGAAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGCTAGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGGTTAATCCTTACCTTTGTCTTTTTAAACTTTGGTTTGCTCATCTCAAGAAACTCTGTGTGCTTATTACCATATATGTAACATTTCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGTAGGTGTATAACCAGCTAGAATGCTACTATTTCATTTAACATTCATTTATGTTTTGGATATTTTATTATACTATTAAGTTAGACACTTGAGCCTGATTGTAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGTAAGTGGTTAAAATACCTTGCAACAGTAATCTATTTGGCCTTTTGTGCTAACTGATTCGATCTTTCTTACCTTTCAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTGATCTAGCTTCATTTTCTCACATCTACAGTCAATGTGCTGATAGCAGTGTGGTGTGTAAACAGAACAGCTTAAAATAGTAGTAATCGCTTTATTCATATTGGCTAAACAATTGTACAAAAACAAGTAAGTAATTCAAATAGGAGGTGCCTAGTACATACCAAAATTATAATGGGTTTGAAGAGTACAAGCTGAAAATTTTTATTAACTCCTTAAAGCTTGTAATTGCATAGTGTGGCCTGCTATTAATATATCGTTTATTTTGTATTCCAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGGTCTGTAGTGATTTGACAGTCAGTTCTAAGTAATTCACAATGGTTGCAGAATAACCTCACAATTTTCTCTATTCCCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGTAATCTTTTGGATTTAATGGATCTGAATGGGGAAATATTCACAAACCTGAAATATGTACTGTCAACATATCTGTTATGTAACTCTAGATGTTATTATGGTATTGAGAAGATTTGGAGAAGTTTGGCTGATGATGCTAACTTTTCTTATTTTTCCTTTTTAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGGTTCGTAAAGTGCTTGTTGTGTATATTTGATATTTGTTCTTGTTTAAAATTGATCTTTTGCTTGGGTTTCAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGGTAATCATGATTGCAAGTTAGTTCCTTTCTCCTTCATGCTATTTTGTGATCGAAGGCTTATAGTGTTGTACCATGATAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGGTTCGATTCTTTGCACATTTTTTATTCCTGCAGGTCAATTGTTAATAATTCTAACAGTATTTTCATCCATCTGTGTTGATCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGGTAAGCTCTTTTGGCTTAATTCGATGACTATTCCAAAATGTTGCTTACTATCATCTTTGTCATTGGTTCTAACTGAATGATTACCATGACAAAATAGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTCGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGTATGCATTGCTACTTCATAAATCTCCATGCCTAATTTTGCAAATTAGTTATGTGGGCTCAGTGGTTCCATATTATATTTATATGTTTTTTTTTGTTAAATGTTTAAGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGGCAAGCAATCTTCTTAGTTGTCCAACAAATACAGAACCTGATGCTCTTTACTCTGTGACTACCCTTTGATTGAGTTATTCTCATGGCATTATTGTTAATGACAGCTTCTAGCTTGTGTCGAGGGAGAGGCTCAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTGCGGGAGGTCAGTTACTTGATCTGACTGTTAAACATTCTAAATTGTCAACATACTTGCCTGTGATCAGCTCTTAATTGAAGTTTGCTCCTGTTATTATGCAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGTGATCGATCCCCCTTTTGTCTGCTTGATTGGCAAAATTTGGTTGCTGTATCTAACATCAATTTTATGCAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGCGTTGCATACTTTCACCTCATAAATATAAGTCTGGCCAACCTTTTGAGGCATGCTTTTGATGTGTGATCATAATTTTGTATCTTCTCAAGATGCTTCTGGGGCGTGTGAATTCAGTTGTAGTTTGGTTTTGATGGAAGCCTGGTGTATTTTCCTGCAGGTGGGTGGTAGACTAAACTCTCTTGGTGACGCCGCTCGTGGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGGTATGCCTTCAGTTGCTGCTTCTTCGTTCCTTCTTCCCATTAGTTTGATTGGCTTTCTCTAACTAATGATTTGTACTGGACTCAGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGCAAGCTCATAGTTTCTCTTAAGCTAGCTGTTGCTGGTTACAATTGGTTAGGAAATATTGTTTAGTGCTTCTTCATCAGATTTCCACTTATCGAGCTAGCATTTCAAACAATCCATTCTTTTAATAATCGTGTTTGCCAAGTAGCACATAATTTCACAACAAAAGGGAACACTTCTGAATTCGTTGTGAATGATGGCAGTGGAAGTTTTGAAAAGTTTAAAATCTAACGAGCGTCTTTATGTTGTATATTTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAGTAAGTTCTGAGATCTCATCACAGTTGCCTACTTCTAAAACACGGAGTTGCGTACAGCTAATCCCAACCTGTGTTTCCCATATGCTCGCATCAGATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGATCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGTGAGCGAGACTAGTACACTCAAAATCTTGTGAACCGATGACAATTTTCATTTCACCGACCAGAGCCTGATGAACAACTCCGCTGTTGCTTGTGCAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGA</dnaseqindica> 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| External Link(s) |
