BGIOSGA026510

From RiceWiki
Revision as of 07:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026510| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026510, complete gene.| tag = P0439B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026510

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026510, complete gene.

LocusTag

P0439B07.22

Ensembl Transcript ID

BGIOSGA026510-TA

Ensembl Protein ID

BGIOSGA026510-PA

Length

4483

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29651462..29655944

Sequence Coding Region

29655911..29655944,29655266..29655481,29654516..29654589,29654215..29654392,29654028..29654110
,29653648..29653951,29653430..29653548,29652270..29652788,29651934..29652146
,29651462..29651809

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29651462..29655944 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29651462..29655944 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATCGGCGCACGGCGGATCGGATCGCCCAGGTTTAGCAATGTGCGATTTTGTCGGTTGGGTAAGATGCCGCTTTCAGATGGAAATCGCATCACGTGTTCATGGTTTGTACAGGCAGCAACCTGCACTAAAATTCCGGCGAGCCAGTATACCTGAAAAAGATGCGGACGCAACCAATGCCTCTAGTGTGTCTCCTGTGAGCAGCAGCAGCAGCTGGCGCAGGGATAGTAGCTGCACGAAGGGAGAAGGCTCAATGGATTCGCAGGAGCCAAGAGTTGATGCTGAACAAAAACCTGTTCTTTCTGATAACCCTGAAGAGCAGACCATTCCTAGCAAAGATGAGAAGGTCCTTGAACCCACCATTTCACACGATTCAAATGGTATCAATCTACCAAGTGAAGGACAAGCCCAAGCTGGCACTTCCAATATAGGTGGGGGACACAATGCTGCATATCCTCAAACCATGTATTCTTCTCAGGCACAGCCATTCTATTACCAAGGTCCAGGATATGATAACCCTTCAAATGAATGGGATGGATATCCTCCTTATGTGAGTGTTGAAGGCTTGGAAGCAGGTCCAGCGGTTGTATACAATGATGATCCTCAATTGATGTACCATGGTGGCTATGGCTATGACCCTTATGCTCATTATTCTCCTATCTCAACGCCTGTACCGGCTGCTGTTAGTGGAGATGGTCAGCTCTACTCTCAGCAGTTCTCCTTCTCGGCTCCTTACTACCAGCAATCAGTACCACCTGGCATGCCATATTTAAGCTCTCCTACTCCAATATCACAGGGTGAGGCAATGGTGCCGATTGACCCAACACAAGGGGCTTTTATCGCCGAAACTCTGAGTCCTAACAGCTTCCTTTTCGGACCAAGACCTGAATGGTTCCGATCGTCTGAAGGAAATGGGTCGTTTCCATCACCTGCGGCTTCACCTCAACCTGCTGGTGGCGTTTCAGGGCCCTTTGGACAAAGCAACTTCCCTATGGCTTCTGGAATGCAATCTCCTCAGCACAGGCCCTTCTATGGTTTTGGGACACCAAGTGACTCTTACGGAAGAGTGTTCTCTCATGGTGGATATTTCCCACAGGCCACTAATTATGGGGGCCCTTTCCCTAGCTTTGGCCTGAATGGTAGGAGTTCTATTCCGATGGAAAAAGGCCGCAGGAGAGGAAGGGGCAATGCTCTTCTTTGCAGCTGCAATGGTTCACTTGACTTCCTCAATGAGCAAAGCCGAGGCCCACGTGCCACTAGGCCTAAGAAGCAACCAGAGGATGGCGGCAAGGATGAGAAGCCTTCTGCAGGCGTTGATTGCGAGTTGTACAACAGGCCTGACTTTGTTACAGAGTACAAGAATGCCAGATTTTTCATCATAAAATCATACAGCGAAGACAATGTGCACAAGAGCATCAAATATGGTGTTTGGGCTAGCACCACAAACGGGAACAAGAAACTAGACTCAGCCTACCGTGAAGCAAAGGAGAAAGAAGAGCATTGCCCAATTTTTCTGCTGTTTTCGGTGAATGCTAGTGCACAATTCTGTGGTGTTGCAGAGATGATTGGGCCAGTGGATTTTGAGAAGAGTGTTGACTATTGGCAGCAAGATAAGTGGACTGGCCAGTTCCCTGTTAAGTGGCACATTGTGAAGGATGTTCCAAATAATCTTTTCCGCCATATAATTCTTGAAAACAATGATAATAAACCTGTGACCAACAGCCGGGACACACAAGAGGTAAAACTCGAACAAGGTATGGAGATGCTGAAAATCTTCAAGGATCATGAGGAGGATGCATCGATACTCGATGACTTTGACTTCTACGAGGAGCGTGAGAGAGCCCTGCTGGAGAATAAGGCGCGGCTGCATCAGCAACATCAGCTGCCCAGCTCTACTGTGGTTGAGCCCAAGAAGCCCTTGACTGTGGCCACTGATCTAGTTGGTCATATAACTAAGAGCTTTGCGCAGGCAGTTCGGCTTGGTGAGGCCAAGAATGTGAGCCCTAATTCAGCTGACAAAGGTGCCAGTGGGGATTCATCTGTCGCTGCAAAGCCTTTGGAAGTTAAAGAGGCCGGCTTAGCATAA</cdnaseq>

Protein Sequence

<aaseq>MESAHGGSDRPGLAMCDFVGWVRCRFQMEIASRVHGLYRQQPALKFRRASIPEKDADATNASSVSPVSSSSSWRRDSSCTKGEGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLPSEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEAGPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSQQFSFSAPYYQQSVPPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRPEWFRSSEGNGSFPSPAASPQPAGGVSGPFGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFPQATNYGGPFPSFGLNGRSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGGKDEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLENKARLHQQHQLPSSTVVEPKKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNSADKGASGDSSVAAKPLEVKEAGLA</aaseq>

Gene Sequence

<dnaseqindica>1..34#464..679#1356..1429#1553..1730#1835..1917#1994..2297#2397..2515#3157..3675#3799..4011#4136..4483#ATGGAATCGGCGCACGGCGGATCGGATCGCCCAGGTTAGCGCGGGGATTTTTTTTTCGTCTCTGTTTCGATTTTTGGCTGGATGGTTGGGTTTGGGGTTGCTCTTCGATCTGGGGTTGCATCGGTGCGATTGTTTTTTGGTTGATTCTTGCTGGGTTCGGGATGTTCCCCTTGCTAGATCTTGCTGCCAAGTGCGTCGGATCTTGGCGCGAGCTGTCTGCGTCGCTTAATTATGACAATTCATAGATAGTATACGTGATTAATTTTTCCCTGATGCCATCCATGTCATAGACTCATAGTGGTGCCGTTGGAATTATTGAGTGAATTAGTGGATTATTAAGATTAGATTTCAGGGATTCGGGCAGCGAAGACCTGCTCAAGCATCGACATTGCCGTCTTCTTTTCTCCTCTTCGCGTCCGTGAATAATGGCAGGTGGTGTGGACTATTGTTGGTTCGCGTGCAGGTTTAGCAATGTGCGATTTTGTCGGTTGGGTAAGATGCCGCTTTCAGATGGAAATCGCATCACGTGTTCATGGTTTGTACAGGCAGCAACCTGCACTAAAATTCCGGCGAGCCAGTATACCTGAAAAAGATGCGGACGCAACCAATGCCTCTAGTGTGTCTCCTGTGAGCAGCAGCAGCAGCTGGCGCAGGGATAGTAGCTGCACGAAGGGAGAAGGTAGTAGTGGTAGGATGCCTGTCAGTATCGACAATTGCCTGTAGAGGCCACAATTGTGGTTTTTAGTATGGTTTTGACTAGTTGATAGGACGGCAGTGAATGATGGAAAATTGATGCCTTTATTGTGCACGGCTGCATATGCTATTGGCTACTATGTGGTGGAGAAGTACTCCCCCGAAATAAGTTGATTCCTAATGTCTAGATTCGTAGCCAGAAATTGATACTTATTTTGGGACGGAGGAAGTATGTGGTACTAAAGTACACTAATTTCAGTAATTTGGAATATTAGTGCCCATCAGCCCATGTATGTGATTGTTTAGAAGTGTGGCTTTGTTCATGAACTGAATGATATGGTTCTATGGTACATCTAAGTAAGTACAATGGGGACTTAGGCACGTAGCTGTCTTTATTTGGTACTTCAGGCCATTTACGATGCTTACCTTTGTTGATTAGTGTGCCTCACCTTTTTGTTTCGAAGTGGCAGGGTATAAAATGTATTACTTATTAATTCGCCTAACAAAGAAGTGCCTAATACAGCATGATCCTTAAAAATTACTTTGCAATACAATTTTCTCTTACTTATGTGTTTTTTGCGAGGAATTTTCTCTACATTTAATTGGAGTAAATCTATGTTCCTTGAATGTTTGATTTGATCTGTTCAATCTCCCTCCCACAGGCTCAATGGATTCGCAGGAGCCAAGAGTTGATGCTGAACAAAAACCTGTTCTTTCTGATAACCCTGAAGAGCAGGTCATTACTTTATGATATCATTTAGAGATGTTCTATACAATCTTCTGATTGTCATAATTGCCTTTTTTGTGCTGATTGTTGTAGTTTTTTTTTGTTTGCTGAAATTGCTTTTTACGACCTTAGACCATTCCTAGCAAAGATGAGAAGGTCCTTGAACCCACCATTTCACACGATTCAAATGGTATCAATCTACCAAGTGAAGGACAAGCCCAAGCTGGCACTTCCAATATAGGTGGGGGACACAATGCTGCATATCCTCAAACCATGTATTCTTCTCAGGCACAGCCATTCTATTACCAAGGTCAGATCACAAACCATATGTTCTTCTCAGGCACACTATTCTCTAATTGATGAATGTTATTGTTGAGTCCTTGACATAATTGATAATTTGTCTTTTATGAGCAGGTCCAGGATATGATAACCCTTCAAATGAATGGGATGGATATCCTCCTTATGTGAGTGTTGAAGGCTTGGAAGCAGGTCCAGCGGTAAGCAATCTGTTTTTTTGGTTGCCAGAAGTTTTTCGTCAAGCACCTTTTCTAAAATTGTTGGCTTTTATTGAAGGTTGTATACAATGATGATCCTCAATTGATGTACCATGGTGGCTATGGCTATGACCCTTATGCTCATTATTCTCCTATCTCAACGCCTGTACCGGCTGCTGTTAGTGGAGATGGTCAGCTCTACTCTCAGCAGTTCTCCTTCTCGGCTCCTTACTACCAGCAATCAGTACCACCTGGCATGCCATATTTAAGCTCTCCTACTCCAATATCACAGGGTGAGGCAATGGTGCCGATTGACCCAACACAAGGGGCTTTTATCGCCGAAACTCTGAGTCCTAACAGCTTCCTTTTCGGACCAAGACCTGGTTATTATCTATCTTATGCCTTGTTCAGCTGATACTCCTAATTCAGGTTTCACTTTTTAGGCATGATTTTAACCTTTTATCCCATGATGATAATTTCAGAATGGTTCCGATCGTCTGAAGGAAATGGGTCGTTTCCATCACCTGCGGCTTCACCTCAACCTGCTGGTGGCGTTTCAGGGCCCTTTGGACAAAGCAACTTCCCTATGGCTTCTGGAATGGTATTCTATGCACATGCCATCTCTTGTCTATTTCTTTTGTCAAATGAAATAGTGGTTCACCCTGTTGCGAGCTACTAATTGTCATAGGTGTCTGGGGATTAATCCATTCAGTTTCCAAACAATCTTGCCTAAGTTTAATTCACATAACAATAAGCTTAGTAGACTAATAAAAAATGCTATGCAATCTGCAGTACCTTTTCTGATTGAAATAGATGGCCGCATATTCTCTCCTATTCTGTTTTCGTGTGATCTTTTAGGCCATAATTCAGTTACCATAAACATGGTCATTCTTGAATTTGGATATAATATCTTCTGACTAGACATGTAATGGCAAGAATGCCTGGTTAGAATTCTGTAAATTCTTATAATGAATGGTCCTGATTCCCGATATGGCCAAGTTGCCTCTAGTTCAAATGCAACCTTAAGCTTTGGTTTTCTTCTTGCCAGTGAATTTCACAGAAATTTGCTTAGAATTATGAATTGCTTTTCCTGGTAAGGACACTGTTTACTATCTCAAAATGACTACTATCACTTGTCTGATAAGGACACTGTTTACTTGTCGGATATTTACAATGACACAGGCATATTTACTTGTATGATCTATCTTCTGACACTCTTCCTTTTTTCCCCTCTAATTTCAGCAATCTCCTCAGCACAGGCCCTTCTATGGTTTTGGGACACCAAGTGACTCTTACGGAAGAGTGTTCTCTCATGGTGGATATTTCCCACAGGCCACTAATTATGGGGGCCCTTTCCCTAGCTTTGGCCTGAATGGTAGGAGTTCTATTCCGATGGAAAAAGGCCGCAGGAGAGGAAGGGGCAATGCTCTTCTTTGCAGCTGCAATGGTTCACTTGACTTCCTCAATGAGCAAAGCCGAGGCCCACGTGCCACTAGGCCTAAGAAGCAACCAGAGGATGGCGGCAAGGATGAGAAGCCTTCTGCAGGCGTTGATTGCGAGTTGTACAACAGGCCTGACTTTGTTACAGAGTACAAGAATGCCAGATTTTTCATCATAAAATCATACAGCGAAGACAATGTGCACAAGAGCATCAAATATGGTGTTTGGGCTAGCACCACAAACGGGAACAAGAAACTAGACTCAGCCTACCGTGAAGCAAAGGAGAAAGAAGAGCATTGCCCAATTTTTCTGCTGTTTTCGGTAATTAAAGCTGTGACCTACTTTCTTATTGTTCCTTTACTGCCTTCATTTTTTTGTTAGTGGTTTTGTTACTTTGAATTTGTTGTTTCTCTTCAGAGTTAACAGTTTGAATGCTATGTACAGGTGAATGCTAGTGCACAATTCTGTGGTGTTGCAGAGATGATTGGGCCAGTGGATTTTGAGAAGAGTGTTGACTATTGGCAGCAAGATAAGTGGACTGGCCAGTTCCCTGTTAAGTGGCACATTGTGAAGGATGTTCCAAATAATCTTTTCCGCCATATAATTCTTGAAAACAATGATAATAAACCTGTGACCAACAGCCGGGACACACAAGAGGTACATAATAACGATAATAATTCTTGTTTTCCCCTTTTACTTTGATATGCATGTTGATATTACAATGTAATGGTTTCAACCATTTAATCTGACACAAATAGATGTCTGCATTATATTATATTAGGTAAAACTCGAACAAGGTATGGAGATGCTGAAAATCTTCAAGGATCATGAGGAGGATGCATCGATACTCGATGACTTTGACTTCTACGAGGAGCGTGAGAGAGCCCTGCTGGAGAATAAGGCGCGGCTGCATCAGCAACATCAGCTGCCCAGCTCTACTGTGGTTGAGCCCAAGAAGCCCTTGACTGTGGCCACTGATCTAGTTGGTCATATAACTAAGAGCTTTGCGCAGGCAGTTCGGCTTGGTGAGGCCAAGAATGTGAGCCCTAATTCAGCTGACAAAGGTGCCAGTGGGGATTCATCTGTCGCTGCAAAGCCTTTGGAAGTTAAAGAGGCCGGCTTAGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026510