BGIOSGA026513

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026513| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026513, complete gene.| tag = P0439B0...")
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Gene Name

BGIOSGA026513

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026513, complete gene.

LocusTag

P0439B07.4

Ensembl Transcript ID

BGIOSGA026513-TA

Ensembl Protein ID

BGIOSGA026513-PA

Length

5506

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29599545..29605050

Sequence Coding Region

29604916..29605050,29603555..29603719,29603354..29603463,29603164..29603269,29602975..29603087
,29602715..29602868,29601472..29602589,29599545..29599584

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29599545..29605050 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29599545..29605050 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCCGCCGGCGATGCTCCGATGGCCCGCCGCCGCGGCGGCGCTCGCGCTCCTCTTCCTCCTCCTCATCGCCGCCGCGGCCCCCGCCGCGGCCTTCTACCTCCCCGGCGTCGCGCCCAACTACTTCCAGAAGAAAGATCCACTTCAAGTGAAGGTGAACAAGCTGTCATCCACAAAGACACAACTCCCCTATTCATATTACTCCCTTCCTTTCTGCAAGCCAGATACGATAGTTGACAGTGCAGAAAATCTTGGAGAAGTTCTACGTGGTGATCGCATTGAGAATTCTCCTTATGTGTTTGAGATGAGAGAGCCCAAGATGTGTCAGATCGTCTGCAAAGCAACCATTAGCGATAAACAAGCAAAGGAGCTAAAGGAAAAGATAGAGGACGAGTACCGGGTGAACATGATTCTTGACAACCTCCCGCTAGTTGTGCCTATTGCAAGGCCAGATAGGGATGATGTTGTTTTTCAGGGTGGATATCATGTTGGTGTTAAGGGCCAATATGCTGGTAGCAAGGATGAGAAGTACTTTATCCATAACCACCTGATATTTTTAGTGAAGTATCACAAGGATGAAAATTCAGATCTCTCTAGAATTGTTGGGTTTGAGGTCAAACCATTTAGTGTAAAACACCAATTCGAAGAGAAATGGAATGATGCAAATACTCGTTTGAGCACATGTGATCCCCATGCCAACAAAATAGTAATAAACTCATATACTCCTCAAGAGGTTGAAGCTGGAAAGGATATCATATTCACATATGATGTTGGCTTTGAGGAAAGTGATATCAAGTGGGCTTCTCGCTGGGACACCTATCTGCTTATGACAGATGATCAAATTCACTGGTTCTCTATTGTGAACTCTCTCATGATCGTGCTTTTCTTATCTGGAATGGTGGCCATGATCATGCTCCGCACTCTATATAGAGATATCTCCAGGTACAATCAACTTGAGACTGAAGAAGAAGCCCAGGAGGAAACTGGTTGGAAGCTTGTTCATGGAGATGTGTTCCGCCCACCAACTAACTCTGACTTACTCTGTGTCTATGTTGGCACTGGTGTCCAGTTCTTTGGTATGCTGCTGGTTACCATGATGTTTGCTGTCTTGGGTTTCCTTTCTCCATCAAACCGTGGAGGATTGATGACTGCGATGCTGCTCATTTGGGTCTTGATGGGGCTGTTTGCTGGATATGCTTCTTCCCGACTCTATAAGATGTTTAAAGGATCAGAATGGAAGAGCATCACCTTGAAGACTGCTTTCCTGTTTCCGGGAATTGCTTTTGGTATTTTCTTCATCTTGAATGCTCTTATATGGGGGGAGAAATCATCAGGTGCTGTCCCTTTCTCCACAATGTTTGCCTTGGTGCTTCTTTGGTTCGGTATCTCGGTTCCACTTGTCTTTGTTGGGAGCTATCTTGGTTTCAAGAAACCTGCCATTGAGGCTCCAGTGAAGACCAACAAAATCCCGAGACAGGTCCCAGAGCAGGCTTGGTACATGAACCCTGCCTTCACCATTCTTATTGGCGGGATTCTTCCATTCGGAGCAGTTTTCATTGAGCTATTTTTCATCCTCACTTCAATCTGGCTTCACCAGTTCTACTACATCTTTGGCTTCCTTTTCCTCGTGTTCATTATCCTCATCATCACTTGTGCGGAGATTGCAATCGTGCTGTGCTACTTCCAGCTCTGCAGTGAGGATTACATGTGGTGGTGGAGGTCCTATCTTACTTCAGGATCATCTGCCATCTATCTCTTCCTGTATGCTGGGTTCTACTTCTTCACCAAGCTGCAGATTACTAAACTGGTGTCAGGCATTCTGTTCTTCGGCTACATGCTTCTGGCCTCATTCTCTTTCTTCGTGCTCACTGGCACAATTGGTTTCTGTGCCTGCTTGTGGTTCACGAGATTGATTTACTCATCTGTGAAGATTGACTAG</cdnaseq>

Protein Sequence

<aaseq>MRPPAMLRWPAAAAALALLFLLLIAAAAPAAAFYLPGVAPNYFQKKDPLQVKVNKLSSTKTQLPYSYYSLPFCKPDTIVDSAENLGEVLRGDRIENSPYVFEMREPKMCQIVCKATISDKQAKELKEKIEDEYRVNMILDNLPLVVPIARPDRDDVVFQGGYHVGVKGQYAGSKDEKYFIHNHLIFLVKYHKDENSDLSRIVGFEVKPFSVKHQFEEKWNDANTRLSTCDPHANKIVINSYTPQEVEAGKDIIFTYDVGFEESDIKWASRWDTYLLMTDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYNQLETEEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMLLVTMMFAVLGFLSPSNRGGLMTAMLLIWVLMGLFAGYASSRLYKMFKGSEWKSITLKTAFLFPGIAFGIFFILNALIWGEKSSGAVPFSTMFALVLLWFGISVPLVFVGSYLGFKKPAIEAPVKTNKIPRQVPEQAWYMNPAFTILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWWRSYLTSGSSAIYLFLYAGFYFFTKLQITKLVSGILFFGYMLLASFSFFVLTGTIGFCACLWFTRLIYSSVKID</aaseq>

Gene Sequence

<dnaseqindica>1..135#1332..1496#1588..1697#1782..1887#1964..2076#2183..2336#2462..3579#5467..5506#ATGCGCCCGCCGGCGATGCTCCGATGGCCCGCCGCCGCGGCGGCGCTCGCGCTCCTCTTCCTCCTCCTCATCGCCGCCGCGGCCCCCGCCGCGGCCTTCTACCTCCCCGGCGTCGCGCCCAACTACTTCCAGAAGGTCCGTTCCTCCTCCCCCTCCTCCTCCTGGTAATGGCTCCCGCTCCTGCGCTTGCTGGATCTCGGCGATCCCCTGGTGCAGATCCGGCTCCTTGAGTCCTCGTGCTCTAGCCTTTTCGGGGTTGTCCGTACGCGCCAAATCGTTTTGGCTTTTTTTTTCTTTTTTTGAAAACCGAAGCCAGCAAAGCTGATGTTATAATTTTGGCGTGATCGTCGTCCTGTTCTTCCACACACACACACACACACACACACACACGTAGGGGATGCTGTTTCGTACGCGTTTCTGTGGATGTTGATGGGGTTTGGTTGATGAGTGATGAATCTGTGTGCCGCTTGTCGCCAATGTTGAGAATAAACTGTATATTTTCAGTGCTGTTTGATGTAGGGGTGTGGCTGATCAGTGCTAAAGGCGTACCGACATTTGGTTAGGGATGCCTCTGTCATGTGGTTCTAGTTGCATGCCCGACATTTGGTTAGGGATGCCTCTGTCATGTGGTTCTAGTTGCATGCCTCTGGAATTCTGGATGGACATTAGCATCCTTAGATTAGATCCATTGTTTCGCAAGCCTCAGTGCTGAGGCAGAACATGTTTCTAACCGAAAGCGAAGCAAAGCAGTTTATCTCTTTGAGTGGAAAAAACTTCTGCAATGATCCTAGCATATGCATTTCGTATTATCCCTCTGAACATTTTCAGAACAAATTATATTGTTGACTATAGCTGTATTCTGTAATTTTTTCAAGCTTGCGCATTGAGTAAACACGCTCCAATTTTCAACATCTTCTCAGCCTCTCTATACCGTACCCTGTTTATCTTCTCTCGTCAATTGTTGCCAGTTGTGCGTGTATCCTCAATTTTGTCACTTACAAATGGCATGCATGTCCTTGCAACACCTGCTTAATCACCCTTTTACCCTTAATTTTTTTTGCTCTCTATCATTCTGTCATTAGTTTTAAGAATGACTGTGCTACTAGGCATTTTCTAGGTTATTACATGTTTATTCTGTTCTGTTACGTAGAGAAGAAAACATCATGAAGGTGACTGAAAGAAAATATTTTTGAGTCTGTGAAGAAAAAAAATATCTAGTAATCTTAAAAACATACCTTTACATTTACCTGCCGTACTAACAATATCTTAAAAATATCTAGTCATATGTTTTGGATGTGCTCTAATGGACATATATACTACAATGCCTGCAGAAAGATCCACTTCAAGTGAAGGTGAACAAGCTGTCATCCACAAAGACACAACTCCCCTATTCATATTACTCCCTTCCTTTCTGCAAGCCAGATACGATAGTTGACAGTGCAGAAAATCTTGGAGAAGTTCTACGTGGTGATCGCATTGAGAATTCTCCTTATGTGGTTAGTACTGGTCTCTGGTTTACAGATTATCTGAGCGCACTCGCACGTTAATGTACCTAATTATCTTCTATTTTACTTCTTTGGACTATAGTTTGAGATGAGAGAGCCCAAGATGTGTCAGATCGTCTGCAAAGCAACCATTAGCGATAAACAAGCAAAGGAGCTAAAGGAAAAGATAGAGGACGAGTACCGGGTGAACATGTATGCCTGTATGGATTGTGTAGTTTGATTGAAATTTATTTTATATGATAGGTTCTGGAGTAACATGGTTAAATTACCTTACAGGATTCTTGACAACCTCCCGCTAGTTGTGCCTATTGCAAGGCCAGATAGGGATGATGTTGTTTTTCAGGGTGGATATCATGTTGGTGTTAAGGGCCAATATGCTGGTGTAAGTCTCTGTGCTCAGCTTACCTTTTCTTTTGTTTGGAAGATTAGTAATGATCTTACAAAAATATATTCTGCAGAGCAAGGATGAGAAGTACTTTATCCATAACCACCTGATATTTTTAGTGAAGTATCACAAGGATGAAAATTCAGATCTCTCTAGAATTGTTGGGTTTGAGGTCAAACCATTTAGGTTCATTCCCTTAACCTTTTTATGTTTGTTTCATACAACGTCTTTGACATATTGGGCAAATTTATGTTTAATCCCTCATATGTGTTTACTAAATTCCCTGACTCAGTGTAAAACACCAATTCGAAGAGAAATGGAATGATGCAAATACTCGTTTGAGCACATGTGATCCCCATGCCAACAAAATAGTAATAAACTCATATACTCCTCAAGAGGTTGAAGCTGGAAAGGATATCATATTCACATATGATGTTGGCTTTGAGGTGATGATATTTTCATGGCACCTCTTCTTTCCTTTTGTACTATGACTCTTTTCCTTCACAGCTATGCTTCCAATGTTATCTTTATTTAAACAATATCTTTTGGTTTTCTTGGCTGGGTCTTGTAGGAAAGTGATATCAAGTGGGCTTCTCGCTGGGACACCTATCTGCTTATGACAGATGATCAAATTCACTGGTTCTCTATTGTGAACTCTCTCATGATCGTGCTTTTCTTATCTGGAATGGTGGCCATGATCATGCTCCGCACTCTATATAGAGATATCTCCAGGTACAATCAACTTGAGACTGAAGAAGAAGCCCAGGAGGAAACTGGTTGGAAGCTTGTTCATGGAGATGTGTTCCGCCCACCAACTAACTCTGACTTACTCTGTGTCTATGTTGGCACTGGTGTCCAGTTCTTTGGTATGCTGCTGGTTACCATGATGTTTGCTGTCTTGGGTTTCCTTTCTCCATCAAACCGTGGAGGATTGATGACTGCGATGCTGCTCATTTGGGTCTTGATGGGGCTGTTTGCTGGATATGCTTCTTCCCGACTCTATAAGATGTTTAAAGGATCAGAATGGAAGAGCATCACCTTGAAGACTGCTTTCCTGTTTCCGGGAATTGCTTTTGGTATTTTCTTCATCTTGAATGCTCTTATATGGGGGGAGAAATCATCAGGTGCTGTCCCTTTCTCCACAATGTTTGCCTTGGTGCTTCTTTGGTTCGGTATCTCGGTTCCACTTGTCTTTGTTGGGAGCTATCTTGGTTTCAAGAAACCTGCCATTGAGGCTCCAGTGAAGACCAACAAAATCCCGAGACAGGTCCCAGAGCAGGCTTGGTACATGAACCCTGCCTTCACCATTCTTATTGGCGGGATTCTTCCATTCGGAGCAGTTTTCATTGAGCTATTTTTCATCCTCACTTCAATCTGGCTTCACCAGTTCTACTACATCTTTGGCTTCCTTTTCCTCGTGTTCATTATCCTCATCATCACTTGTGCGGAGATTGCAATCGTGCTGTGCTACTTCCAGCTCTGCAGTGAGGATTACATGTGGTGGTGGAGGTCCTATCTTACTTCAGGATCATCTGCCATCTATCTCTTCCTGTATGCTGGGTTCTACTTCTTCACCAAGCTGCAGATTACTAAACTGGTGTCAGGCATTCTGTTCTTCGGCTACATGCTTCTGGCCTCATTCTCTTTCTTCGTGCTCACTGGCACAATTGGTTTCTGTGCCTGCTTGTGGTTCACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTGCTTCATCTCTCTCTCCTGCGGCTGATGATGGGTGGCATACTACTAGAAAAACGATTTTCTACAATGAACACATATATTTTCACAGGAAGATCTTATTTTCGACTATGATTGCCTGGCTGTGTAGTTGTTGTGTGGAGAGGAGTCCAATGGCCGACCGCCTGGGAATATCCTATTCCCATTTTTGCAAGCAGATGGCTTAAAAGGGCCGCCTGCAATAATACCCTTATTTTTGCAGGCGGGCCTCTTAAGCCATATGGTGAAATTTGGTTGTGGCATTTAAATAGACGCAAAAGGAAACTGAAACACCAGTTTTTTCTAAGTCCCTAACTCCCTCCCTTTTCCTCTCTCAAGCTCCTCTTTCCTCACCCGAACGGCAGCAACGGCGGGGCTCGGTAGTGTTGGCGGGGAAGGGAGCAGCGGTGGTGCTCCCCCGGCCGTGGCGCACGGTTCTCCGACGAGGGTGGTGGATCTAGCAATGAGGGCGGCGGAGGCGGCGGATCTGGCGATGGTTCGTCTTGGCCTCCTCCTCGTCATGGTGGCAAGGGCGCACCCTCCTCGCGCTGTTTGTGGTCGTCTTCCTCGTGGTGGTCTTGGTGACAATGTTGGCGCTGGAGGTGGTGGTAGAAGCGGCGTCCATGGAAAGCCGGCTTCTCGATGGCGACGGCGGCATCAATCCTCCCTGCAATGATGACCACCACCACCACGTCCAACTGCTGTTTCGTTTTGGCTACCTGCAAAAATCGTTGTTCTAGTAGTGGTAGTACTGATGAGAAGTAGATAGCATATAAGATATGGAGGAAATTAACACATTATTATTGGTAGTATTGACATTATTGGAGTAGTGATCAGGATGATGCATGCATGGAAAATCAAAACAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATCTAGTAGCTAGCCGTCAATATCAAACTCGTGTCGTCTATGGTAACATTTGAGGCATATGGGAGGTTTTTGGATATCAGGTGTTGAGATTTTGATTTTTCTGGGAACAGCTTGAATTTGATTATTTTAAGGTTTTGGATGCCCTTTTATATCCGATGCCGAATTCGTGGATGAACAGTAGCATCAACCGCTGCCTCATCGGAGCCAATAAAGCCTCACGGTACGACGGCGAGTCGGCCGGCGGCGACGTTGAGGAGGGAGAAGCACTAAGCCTCACTCATATATGACAACGACGAGTTGGCCGGCGGACGGCGGCGGAGGAGCAGCTAAGCTTCGGTGCCTTCTGCACTGGTTTTCTCTGGTCACGACATACGTGGTTGGACCGCAATAACTGACTGACTGATTACACGTACGTCACACAGCAATATGGCAACTTTTCAACTCACCCAAAGAAAAACCGGAGCAAAGCAGCTGCTGGTGATAGTACCAATTACTACCAAGCACGTTATGCAGAAAACAGTAGTATTCGGCAACTGTATATAATAAAATGAATGTATACAGTGGTCCATAAGAATTGAGAAATATGCTCTGCCATATGAAATTAACAATCGTAATTAGCCTTATATAACCTCATATCAAAGATGTATCATCTCATTTATAGTGAATGAACATCAGTGGTTTATAAACTAAGAACTACGATATAAATTTTCTTGAAAATCGGCAAAATACAAGTGGATTCTGATCCTCGTCTCACAATTCTCCACAATAATCATACAGAACTATTGGAAGCCGGATGTATAGCAACTCTGCGCCTAGTCATCTTCACAGATGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTGGTTCACGAGATTGATTTACTCATCTGTGAAGATTGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026513