BGIOSGA026515

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026515| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026515, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA026515

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026515, complete gene.

LocusTag

OSJNBB0011H15.39-1

Ensembl Transcript ID

BGIOSGA026515-TA

Ensembl Protein ID

BGIOSGA026515-PA

Length

2562

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29540413..29542974

Sequence Coding Region

29542842..29542974,29542528..29542754,29542341..29542439,29541910..29542104,29541695..29541787
,29541494..29541589,29540695..29540835,29540413..29540589

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29540413..29542974 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29540413..29542974 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCGACCAGCCTCGCCGCGCTGCCCTCGCAGCTCGCCTCCCCCGCCCGCCGCGCCGCCTTCTCCCGGTCCGCTACCGCGCGGCCGCGCCACCACCACCACCCCCTCCTCCGCGCACCGCCCAAAGGCTGCAGGCTGGTGGTGACCTGCAACGCGCAGACGGCGGTCCCGACCAGCATTGCGCAGGGCACGCCCGTCAGGCCGACCAGCATCCTGGTGGTCGGCGCCACCGGGACGCTGGGACGGCAGGTGGTCAGGCGGGCGCTGGACGAGGGCTACGACGTGCGCTGCCTCGTCAGGCCCCGCCCGGCGCCGGCCGATTTCCTCCGCGACTGGGGCGCCACTGTGGTCAATGCCGATCTCAGCAAGCCAGAGACCATTCCCGCGACGCTTGTTGGTATTCATACCGTCATCGATTGTGCTACAGGGCGTCCCGAAGAGCCCATTCGGACGGTAGATTGGGAAGGAAAGGTTGCTCTAATACAATGTGCTAAGGCCATGGGAATTCAAAAGTATGTGTTCTACTCTATTCATAACTGTGACAAGCACCCGGAGGTTCCCTTGATGGAAATCAAGCATTGTACAGAGAAGTTTATTCAGGATGCCGGTCTGGATTATCTCATCATCCGTTTGTGTGGTTTCATGCAGGGCCTAATTGGGCAATATGCTGTGCCCATACTAGAAGAGAAGTCAGTATGGGGAACTGATGCTCCTACCCGGATTGCTTACATGGATACCCAGGACGTTGCTCGACTGACGTTTATTGCCATGCGGAATGAGAAGGCTAGCAAGAAGCTCTTAACTTTTGCCGGACCACGTGCCTGGACAACTCAAGAGGTGATTACACTGTGTGAGCGGTTGGCTGGCCAAGATGCCAACGTTACTACTGTCCCTGTTGCAGTGTTGAGATTTACTCGTCAGTTGACACGGTTCTTCCAGTGGACAAATGATGTGGCTGACAGACTGGCATTCTCAGAGGTCCTCTCCAGTGACACAATTTTCTCAGTTCCAATGAATGATACATACCAGCTTCTTGGGGTAGATTCAAAGGATATTCTCACCTTAGAGAAGTATTTGCAAGATTACTTCACTAACATTTTAAAGAAATTGAAGGATCTCAAGGCACAGTCCAAGCAAACTGACATATTCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MASSTSLAALPSQLASPARRAAFSRSATARPRHHHHPLLRAPPKGCRLVVTCNAQTAVPTSIAQGTPVRPTSILVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIRTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKHCTEKFIQDAGLDYLIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDVARLTFIAMRNEKASKKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVAVLRFTRQLTRFFQWTNDVADRLAFSEVLSSDTIFSVPMNDTYQLLGVDSKDILTLEKYLQDYFTNILKKLKDLKAQSKQTDIFF</aaseq>

Gene Sequence

<dnaseqindica>1..133#221..447#536..634#871..1065#1188..1280#1386..1481#2140..2280#2386..2562#ATGGCGTCGTCGACCAGCCTCGCCGCGCTGCCCTCGCAGCTCGCCTCCCCCGCCCGCCGCGCCGCCTTCTCCCGGTCCGCTACCGCGCGGCCGCGCCACCACCACCACCCCCTCCTCCGCGCACCGCCCAAAGGTACAATACCTATCCCGTTTCCGCCTTCCCCTCGCCTGCAGTTGCGGATGATCGTGTGAGGTAAACGAAGTTTGGGGGGTTCTCCAGGCTGCAGGCTGGTGGTGACCTGCAACGCGCAGACGGCGGTCCCGACCAGCATTGCGCAGGGCACGCCCGTCAGGCCGACCAGCATCCTGGTGGTCGGCGCCACCGGGACGCTGGGACGGCAGGTGGTCAGGCGGGCGCTGGACGAGGGCTACGACGTGCGCTGCCTCGTCAGGCCCCGCCCGGCGCCGGCCGATTTCCTCCGCGACTGGGGCGCCACTGTGGTCAATGTAGGTTTCCACTGTTTTCCTTGCTGCTATATCAACCTCACTGTTCAATGTTTATCCGCCTCATGCCCATTTCTGTTTGCTGATTTAGGCCGATCTCAGCAAGCCAGAGACCATTCCCGCGACGCTTGTTGGTATTCATACCGTCATCGATTGTGCTACAGGGCGTCCCGAAGAGCCCATTCGGACGGTATGTTGTTAGCATTTCTTTAAGCATAATGTGATACTTCTGTATTCCTGTCCTGAAGTTGATTCTTGCTGAAGTGTATTTGTACTATTGTTGAGTCGTGACTAAAGCTAATCACATTGCTTTTAATATATCACGTAATTGTGATGTAGTCCTTATACTGTGAGTCCTGTGACATATATGCTGTAGAGTCGTTGAGTGAATTTGGTTTCCGTTTTGCTAATAGTTGTTCTATTTAGGTAGATTGGGAAGGAAAGGTTGCTCTAATACAATGTGCTAAGGCCATGGGAATTCAAAAGTATGTGTTCTACTCTATTCATAACTGTGACAAGCACCCGGAGGTTCCCTTGATGGAAATCAAGCATTGTACAGAGAAGTTTATTCAGGATGCCGGTCTGGATTATCTCATCATCCGTTTGTGTGGTTTCATGCAGGTAAATGTGTTCCTTCTGTGGGGTTCTATATATTTGGCCAGGAAATTGATTTGTTTTCGAATATAAACAAGGGTAGTTAATTGTTTCCTGAAATGAATTCTGTCAAATGTTGGTCTGAGTAGGGCCTAATTGGGCAATATGCTGTGCCCATACTAGAAGAGAAGTCAGTATGGGGAACTGATGCTCCTACCCGGATTGCTTACATGGATACCCAGGTTTATCTTTCTCCTTCTCCATTGAAAGATGAATATGTGACCTATTTGTAACATTATCTCTTCAAAGTCCCTTCCTTTGATAGAACATCCCTCGTGTGATTGTAGGACGTTGCTCGACTGACGTTTATTGCCATGCGGAATGAGAAGGCTAGCAAGAAGCTCTTAACTTTTGCCGGACCACGTGCCTGGACAACTCAAGAGGTAGTATACTGTACACTGTTCTAATGACGTCAATTCTTTTTTTAAGGATGTAAATACATATTTGGTTTCCATGAATAAATTGCACAGCATGTTTATTCTTGACTGGAAATATACTCCCTCTGTCAGAAATATATGTTGTTTTGCAAAATGTGCAGCTGAACTTCCTTATCTTTGTCCACCAACATATCAAATGGTATTAGGCTTGTCATATGTACATATTTGGCTTCCATGAAAGCCTGTCATGAAAATTTTTGCTGGAATTTTCTGTGGCGCATCTGTTTTAGTTTTCCAGTGTGTGTGTGTGTTTATGTGGTATATTTTGGGGATAGGAAGGGCTTTTAACCCCTAACCCTCCCCTTGTAGTACTATATTATTTATTCTTAATGAAATAGCACAGAGCTCTTCTGCGTGTTCAATGGAAAAAATTGCAATATACTAATTTATGTTCACAAGCATATTCATATAAATGTAAAGGTCAAAGTTGCATGTGGAGACTATATTGTTGTCCAAAATGTCATGAATTCTTCAAGAGATGGGAGTACTAATCTTGTATTTCCTGCTCTTAATTTCGTTTTCAATGTCAGAATGTACCAAATGATGGCTTCTGAGAGTTGGAATACTATCATTTACTCAACTATTGTATTGTTTTTTTACTCAGGTGATTACACTGTGTGAGCGGTTGGCTGGCCAAGATGCCAACGTTACTACTGTCCCTGTTGCAGTGTTGAGATTTACTCGTCAGTTGACACGGTTCTTCCAGTGGACAAATGATGTGGCTGACAGACTGGCATTCTCAGAGGTTACACTCTAGACTTATCTAAATATTGCACTTGATTTTTCAGTAATTATAAAATTGTCAAGGCTTATGAAAATTAATAACTAGTATTTAATTGTTATAATTCAGGTCCTCTCCAGTGACACAATTTTCTCAGTTCCAATGAATGATACATACCAGCTTCTTGGGGTAGATTCAAAGGATATTCTCACCTTAGAGAAGTATTTGCAAGATTACTTCACTAACATTTTAAAGAAATTGAAGGATCTCAAGGCACAGTCCAAGCAAACTGACATATTCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026515