Os11g0125500

From RiceWiki
Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0125500| Description = Protein prenyltransferase domain containing protein| Version = NM_001072152.1 GI:115483916 GeneID:4349641| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0125500

Description

Protein prenyltransferase domain containing protein

Version

NM_001072152.1 GI:115483916 GeneID:4349641

Length

2759 bp

Definition

Oryza sativa Japonica Group Os11g0125500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1144023..1146781

Sequence Coding Region

1144283..1144492,1144683..1144895,1145007..1145150,1145308..1145418,1145863..1145979
,1146066..1146087,1146653..1146714

Expression

GEO Profiles:Os11g0125500

Genome Context

<gbrowseImage1> name=NC_008404:1144023..1146781 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1144023..1146781 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgggccacctccggcgatcctcccaccgagtactcattgccaacctcgccgtctactcgatacagagttcacaaattgagttcatagcaggctggtgtagcaaccataccaccagaaatttctctgcagatacaagtaatagagtttcaaatgatcgagggcatcaatcaagggagttgaaaccaagtcttgtgaaggatgatgttgcaatcatcgaacgcatacaaaacagtacaaaggaattgagacaaggcccagttgggaaaaatctgtcatcggcggagaaaaggaaatttcttgtcaacactctgcttgacctggaagattcaaaagaaggtgtttacagcactctggatgcttgggttgcctttgagcaggattttcctgtggcctcaataaagcaagcacttgtagctcttgaaaaggaggaacagtggcatagaatcgtccaggtgataaaatggatgtcgagcaaaggacaagggaagactatcagaacatatgagcaattagtgtgtgcacttgagaaggataatagagcggatgaagcttgcagaatctgggagtttaagatagcccatgatctacaatcagttccatggcggttttgccgtcttatgttgggtatttactacagaaataataagctagatagacttgtcaagctcttcaagaatcttgaagcatgtggccgtaaacctccaagcaaagatatcgtacggaaagttgaagatgcatatgaaatgcttggtttagtggaggagaaaaaggaattgcttgagaaatacaaggatttgtttgacaagccatcgagtaatgacaaaaagaaaggccggcagttcaaaaaggttgagaagaacatcaagccggcttag</cdnaseq>

Protein Sequence

<aaseq>MLGHLRRSSHRVLIANLAVYSIQSSQIEFIAGWCSNHTTRNFSA DTSNRVSNDRGHQSRELKPSLVKDDVAIIERIQNSTKELRQGPVGKNLSSAEKRKFLV NTLLDLEDSKEGVYSTLDAWVAFEQDFPVASIKQALVALEKEEQWHRIVQVIKWMSSK GQGKTIRTYEQLVCALEKDNRADEACRIWEFKIAHDLQSVPWRFCRLMLGIYYRNNKL DRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLVEEKKELLEKYKDLFDKPSSNDK KKGRQFKKVEKNIKPA</aaseq>

Gene Sequence

<dnaseqindica>2290..2499#1887..2099#1632..1775#1364..1474#803..919#695..716#68..129#acacgaatcggacttcgggggctcttccgccgccgccgccccgccctcgccgccggcggcccggacgatgttgggccacctccggcgatcctcccaccgagtactcattgccaacctcgccgtctactcgtaagagcgattccttttcgctgttcctgtgctaaagccctttctctttttattccgcccctctttctttctccaaatctactagttgccggactactgcttgcctgcttgtgttcttgctccatttaccaacccagataatgtcatgatgcagccttgttttgactgtaggcacgccccaagtctgctcaacattctattatttgttttactgggcactagttgaactagtgaaaaacataggggtttttattgtctttcctctaattctccaagcagtgtgaacactttaagtaactaacccctaccctttggaggtcttcaagattctcacatcgacagattaatgtaacaagcactttgctaacggtagtttagcagtgtctgagagattagtctaacatgtttaagttgttattgatccaacatgcattcttaaactggagaataaatcaggagtttttagcctttctgtcactgtaatttcttgaagagattgcttcttgctacctttgagccattggctaattctattactaatctcactgctctctacattgtgcaggatacagagttcacaaattgaggtactattctcctttgtcctttccttcggacaacattttacacccattttacaaagtcatccttccatttatacacctgtttttagttcatagcaggctggtgtagcaaccataccaccagaaatttctctgcagatacaagtaatagagtttcaaatgatcgagggcatcaatcaagggagttgaaaccaagtcttgtgaaggtatgtacacaaagttaaaactgtatacttatctttgtgtgtctttcatccacaagtttttaactttatgggtatttcttagttgcttagtgtgccaaattggtccagttacatattcctgtcatccttatggagttttgggataattttctatttcttcacagttaatctacatcccatgttaccatggcacattcccttgtttatgttccaggttactcccctaaggcttaacattcaacccgtttcatttttctaatccaacagtttcactaagatttctgtcattacgatggttttgtttttgtctatattatgactcgtcttttgagactgctaaatggttgtttttagacaataggcatagactgctggatgtttcacagtcctagagttctaaaagatcgatgattgattattgaagaaattgtctttgtattgcaggatgatgttgcaatcatcgaacgcatacaaaacagtacaaaggaattgagacaaggcccagttgggaaaaatctgtcatcggcggagaaaaggaaatttcttgtcaacactgtacgtgcagctagttttccatattgtctggtttattgtttgactgcatcaagtctccacgataattaggtttataattgcttcctggtacacatcaaatctattttatttttatgagtacataaatctactaactactggaacttccaaattgtagctgcttgacctggaagattcaaaagaaggtgtttacagcactctggatgcttgggttgcctttgagcaggattttcctgtggcctcaataaagcaagcacttgtagctcttgaaaaggaggaacagtggcatagaatcgtccaggtttcggacattatgatttgcttgattttaatttaactttgtggatctaatttgaaaaggaggcttcgtttgtgcacccagaattaaataaatggctaactgcatggttaggtgataaaatggatgtcgagcaaaggacaagggaagactatcagaacatatgagcaattagtgtgtgcacttgagaaggataatagagcggatgaagcttgcagaatctgggagtttaagatagcccatgatctacaatcagttccatggcggttttgccgtcttatgttgggtatttactacagaaataataagctagatagacttgtcaaggtatggatctcaagcccttgtccatcaagtaattttttattgttgtattttaagttgatgatcctctgtagaagtttgatgggtcttgagtgatcaatgatgccgcttagtctcttacagattgcatagtatgataaaacctacttacgtggattacattacatttccctgtttttggtgatgatattagctcttcaagaatcttgaagcatgtggccgtaaacctccaagcaaagatatcgtacggaaagttgaagatgcatatgaaatgcttggtttagtggaggagaaaaaggaattgcttgagaaatacaaggatttgtttgacaagccatcgagtaatgacaaaaagaaaggccggcagttcaaaaaggttgagaagaacatcaagccggcttagacatgtgatgggacacgcctgcacctctaagcttagagcatagaacggaaacatctgaatagaaatctgccagtgaagttgttactctttcctttgggatgagaatctgattatcaacagttaagattagaagtatgcatggtagtgcagttaacattgttgtgagtcattttccttcgtccagatttgttgctgacagtgcatccatatataatgggatgagaacctaatctaatgcagcaagtaatagtatttgccgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0125500, RefSeq:Os11g0125500