BGIOSGA026533

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026533| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026533, complete gene.| tag = OsI_301...")
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Gene Name

BGIOSGA026533

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026533, complete gene.

LocusTag

OsI_30145

Ensembl Transcript ID

BGIOSGA026533-TA

Ensembl Protein ID

BGIOSGA026533-PA

Length

6342

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29251385..29257726

Sequence Coding Region

29257522..29257726,29257052..29257141,29256849..29256949,29256660..29256773,29256462..29256543
,29256315..29256382,29256170..29256235,29255971..29256095,29255417..29255750
,29255212..29255328,29254083..29255135,29251836..29252083,29251385..29251691

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29251385..29257726 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29251385..29257726 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCGGCGGAGGAGGAGGCGGCGGCGGCATGGGACAAGGCGGAGGCCAAGGAGGAGAGGATAATGGTGTCGGTGCGGCTGCGGCCGCTCAACGGCAGGGAGGCCGGCGACAGCTGCGACTGGGAGTGCATCAGCCCCACCACCGTCATGTTCCGCAGCACCGTCCCCGAGCGCGCCATGTTCCCCACCGCCTACACCTACGATAGGGTGTTTGGTCCTGATTCCTCTACAAGGCAGGTCTACGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACTCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGACCGGGATAACCGAGTATAGTGTTCTCGACATCTATGACTACATCGAAAAGCATCCTGAAAGAGAATTCATTTTGAGATTTTCGGCAATAGAGATATACAATGAAGCTGTGAGGGACCTCCTGAGCCACGACACCACACCCCTCAGACTTCTTGATGATCCGGAGAAAGGAACTACCGTAGAGAAACTCACTGAGGAAACCTTGAGGGACAAGGATCATCTTAGGAACCTTCTTGCTGTGTGTGAAGCTCAAAGGCAGATTGGAGAAACTGCTTTGAATGAAACGAGTTCAAGGTCCCATCAAATACTCAGATTGACAATTGAAAGTTCTACTAGACAGTATTTGGGAAGAGGCAACTCAAGCACCCTTGTAGCTTGTGTGAACTTTGTTGACCTAGCAGGAAGCGAGCGTGCATCTCAGACTGCTTCAGCTGGAGTGAGGTTAAAAGAAGGTAGCCATATCAATCGAAGTCTTCTTACACTGGGAAAAGTTGTTCGGCAACTCAGTAAGGGAAGAAATGGCCATATCCCCTACAGAGATTCAAAGCTGACTCGTATATTACAGTCTTCCTTGGGAGGCAATGCAAGAACTGCTATTATCTGCACAATGAGCCCTGCACGGAGTCATATTGAGCAATCCAGGAATACACTATTGTTTGCTACTTGTGCAAAGGAGGTAGTTACAAATGCACAGGTCAATGTAGTGATGTCTGATAAGGCACTCGTGAAGCATCTACAAAGAGAACTTGAAAGATTACAAAGTGAGATTAAATTTCCGGCGCCAGCCTCCTGCACTACTCATGCTGAAGCATTGAGGGAGAAGGATGCACAAATTAAAAAGCTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCTCAACTTGACTGCTTGCTTAAAAGCGATTGTGATGACCATAGTGACGGCCGCGTTGCGAAGCGATGGGATGAGCATAGTCGATCCTCAGAGTCTTTTGCACGGAATGCGTCTGAAGAAGCATTTTCAGTTTCAGATACTTCTGGTGTTCCTTACCAGGATCAAGATAATGCTGTGTTTAATGGATCCTATGTCTTCAGTGATGACCGTGATGATATTGTATTCCCTGTTCAAACAGTGGATCTTCCTGAAGAAACAAAGCATGAAAAATTTATGTCACCTTGGCACCCTCCCAGCCACCATAGTTCTTCTGATTGCATAGAGTCATATCATATGACAGAAGCGGCTTCCAGAACTGCATCAGAAGTCTCTGAAGAGCATTGTAGAGAAGTCCAATGCATAGATATACATGAGCATAGAAGAAGCACAAGTCACAAATTCGACCTTTTGCTGCCCCAGGACACCGAGTTCCAAACACCTGAATTAGAGATCTCCAAAGAAGCAGTCCCTCAACCTGATGAAGACCAAGAACTTGAGAGCATAACAAACAGAATGGAAGATCCTACCAGGATGTGCCCTGTCGAGGAGGAGCAACAAGATGAGATCGTAGATACATGTGAATCTAATGGTACCACAGACAATGATGTCAAGCTATATACATGTGATTCTAACATTTCTTTTGACATTCAGAAACCTTACCCTAATGGATGTCTGACTGTAAAAAGGTGTATACTGAGCTCCAAGGATAGGGCGTTGTCTAGAAGTAAAAGCTGCAGGGCTAGCTTTATGATTATTCCAAATAGTTGGTTTGATGATTCCGAGTACACCAGCCAGACACCACCTAATGAAATCTTGAAGCATACCCCAAGAAGGTTTGACAAGGTTAGGAGAAGCTTGTATCCAGAAAATGATAACCCTTCTTCAGTAGACCGTTCTGAGTTTTCTGGTGAAGTTTCTTCTGATGAAGTAGTGAAGGACATGAGCACCATTGATGAAGTAGCCAAAGACATGTGCCCCAGCGACGCAGAACAAGAAACTCTCACCAGTGACATCAGTTGTCTCACCAAGTTGAAGAAGACTGATAGTGACCATGAGGATGAACTTGATGAGTATCAGGATCAGCAGTCTATTAGAGATGGATCTACAACCTTGAGAACTGTCAAAGATGTTGGCATAGATTCATCACTGAGTGCCTCTCCTTCTCGTTGGCCTATTGATTTTGAGAAGATGCGGCAAGAGATTATTCAGTTGTGGCACGAATGCAACGCTCCCATCGTACACAGAACTTACTTCTTCCTCCTCTTCAAGGGAGATCCAGCAGATAACATCTACATGGAGGTGGAGCACAGGAGATTGTCCTTCATTAGGAGCCTGAAAAATCTTCGACGCGAAAGGGACATGCTCTACAAGCAGATGCTTAAGAAGCTCACCAATGGGGAGAAAGAGCGCGTTTACGCTAGATGGGGAATCGATCTGAGCTCGAAACAGCGAAGATTGCAGCTATCTCGTCTCGTCTGGACGCAGACCGATATGGAACACATCAGGGAGAGTGCATCCCTTGTTGCGAAGCTGATTGAGCTGCTGGAGCCAGCACAGGCACTGAAGGAGATGTTTGGACTGAACTTCACACTAGCTCCCCGATCTGAACGGCGATCCTTCGGCCTTCTAGGTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWECISPTTVMFRSTVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMTGITEYSVLDIYDYIEKHPEREFILRFSAIEIYNEAVRDLLSHDTTPLRLLDDPEKGTTVEKLTEETLRDKDHLRNLLAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVACVNFVDLAGSERASQTASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHIPYRDSKLTRILQSSLGGNARTAIICTMSPARSHIEQSRNTLLFATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQSEIKFPAPASCTTHAEALREKDAQIKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKRWDEHSRSSESFARNASEEAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEETKHEKFMSPWHPPSHHSSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLLLPQDTEFQTPELEISKEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTDNDVKLYTCDSNISFDIQKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFDDSEYTSQTPPNEILKHTPRRFDKVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMSTIDEVAKDMCPSDAEQETLTSDISCLTKLKKTDSDHEDELDEYQDQQSIRDGSTTLRTVKDVGIDSSLSASPSRWPIDFEKMRQEIIQLWHECNAPIVHRTYFFLLFKGDPADNIYMEVEHRRLSFIRSLKNLRRERDMLYKQMLKKLTNGEKERVYARWGIDLSSKQRRLQLSRLVWTQTDMEHIRESASLVAKLIELLEPAQALKEMFGLNFTLAPRSERRSFGLLGT</aaseq>

Gene Sequence

<dnaseqindica>1..205#586..675#778..878#954..1067#1184..1265#1345..1412#1492..1557#1632..1756#1977..2310#2399..2515#2592..3644#5644..5891#6036..6342#ATGGGGGCGGCGGAGGAGGAGGCGGCGGCGGCATGGGACAAGGCGGAGGCCAAGGAGGAGAGGATAATGGTGTCGGTGCGGCTGCGGCCGCTCAACGGCAGGGAGGCCGGCGACAGCTGCGACTGGGAGTGCATCAGCCCCACCACCGTCATGTTCCGCAGCACCGTCCCCGAGCGCGCCATGTTCCCCACCGCCTACACCTACGGTACAGTACCACCTACATCCTCCTTCACCTCAATTTTGCAAATGGGAATCTCACATTGTTTTGGTCAATCAAGTTTCTTGGAGTGTGTTTAGTTCACGCTAAAATTGTAAGTTTGGTTGAAATTGGAACGATGTGACGGAAAAGTTGGAAGTTTATGTGTGTAGGAAAGTTTTGATGCGATGGAAAAGTTGGAAGTTTGAAGAAAAAGTTTGGAACTAAACAAGGCACCATGTAGTACTATGCATTTTGTAGCCATGTAGTTTGGAAAAGTTTTGATGTTTGTAGCCATGTAGTACTATGCATTTTGTTTGGCTGGCAGCCTGTTTGCTTGAAGAATGAATCTCTTCTACTTTCTTGTTCCTTTCAAAATTTTTTTACAGATAGGGTGTTTGGTCCTGATTCCTCTACAAGGCAGGTCTACGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACTGTAAGCACCGAAGAAATGACGCAACTTCGTTGCATCGTCGCTTTGAGTTTTGTGAGGTGATGTGGGGTAACTAACATCTGCACTTGGGTTGGTTCTTGGCAGCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGACCGGGATAACCGAGTATAGTGTTCTCGACATCTATGACTACATCGAAAAGGTGTGTGCAATGTGAACATTGCTTTACTTTACCTCTGCGAAAATTTATCCGTCTCATTGTGTGCCATTGCTACAGCATCCTGAAAGAGAATTCATTTTGAGATTTTCGGCAATAGAGATATACAATGAAGCTGTGAGGGACCTCCTGAGCCACGACACCACACCCCTCAGACTTCTTGATGATCCGGAGGTACACTCACTGTTCTCCTTTTACTAGCTTGAACTTACTACATAATCTGTTTGTGTTTTCCTCCAACCTGTATACTGTTCTCGAGTTGTTCATGTTTCCATTTGATTTCAAAACAGAAAGGAACTACCGTAGAGAAACTCACTGAGGAAACCTTGAGGGACAAGGATCATCTTAGGAACCTTCTTGCTGTGTGTGAAGGTGTGGGACTGAACTTGTTGGAAATAAGAGAGGCATTGGCCTTCAATTTTCTTTAATTGCTTAATCTGGTTTGCTACAGCTCAAAGGCAGATTGGAGAAACTGCTTTGAATGAAACGAGTTCAAGGTCCCATCAAATACTCAGATTGGTCAGTGGCACATCAATATTTTTTTTTTGTTTTATGCTACTTTTTAGGAAATGATTTTTTGACAGACTGTTAATTTCAGACAATTGAAAGTTCTACTAGACAGTATTTGGGAAGAGGCAACTCAAGCACCCTTGTAGCTTGTGTGGTATGGAATATCATCCTATATTCAAGACTCGTTTGTATTGTGTGTTCCATGCACTGAGATTCTTTTCTGGGCAGAACTTTGTTGACCTAGCAGGAAGCGAGCGTGCATCTCAGACTGCTTCAGCTGGAGTGAGGTTAAAAGAAGGTAGCCATATCAATCGAAGTCTTCTTACACTGGGAAAAGTTGTTCGGCAACTCAGGTTCATTTTCCTCTCGCAAGAACTTGTAATCTTTAGTGGTTTGCCTTCTATCCAGAATATATGTTTCTAAGTAGTCAAGGAGTCTCTGCGCACCCTTTTTCCTCTCTCTTTCATATTCACTGGATGAACTAATTTTGAATTCCTTTTGCGCGTCGCAACTCAACTCTTTGATTGCATTATTACCATCCAATTTAGTCTAAGCTATATGTTCATGTTGCAGTAAGGGAAGAAATGGCCATATCCCCTACAGAGATTCAAAGCTGACTCGTATATTACAGTCTTCCTTGGGAGGCAATGCAAGAACTGCTATTATCTGCACAATGAGCCCTGCACGGAGTCATATTGAGCAATCCAGGAATACACTATTGTTTGCTACTTGTGCAAAGGAGGTAGTTACAAATGCACAGGTCAATGTAGTGATGTCTGATAAGGCACTCGTGAAGCATCTACAAAGAGAACTTGAAAGATTACAAAGTGAGATTAAATTTCCGGCGCCAGCCTCCTGCACTACTCATGCTGAAGCATTGAGGGAGAAGGATGCACAAATTAAAAAGGTATTTTTTTATCCTATCATATAAGATACCATGCTTCTGTATCTTTTGCACCTTGTAACTTTATACCCATTTGTGTATGTGTGTTCAGCTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCTCAACTTGACTGCTTGCTTAAAAGCGATTGTGATGACCATAGTGACGGCCGCGTTGCGAAGCGATGGGTATTTGTTTCTTTCATACTTAATATTAGAACTATTGCTCTGTGCAAAACTTAATGAACTGGCTTTCCTCTGATAGGATGAGCATAGTCGATCCTCAGAGTCTTTTGCACGGAATGCGTCTGAAGAAGCATTTTCAGTTTCAGATACTTCTGGTGTTCCTTACCAGGATCAAGATAATGCTGTGTTTAATGGATCCTATGTCTTCAGTGATGACCGTGATGATATTGTATTCCCTGTTCAAACAGTGGATCTTCCTGAAGAAACAAAGCATGAAAAATTTATGTCACCTTGGCACCCTCCCAGCCACCATAGTTCTTCTGATTGCATAGAGTCATATCATATGACAGAAGCGGCTTCCAGAACTGCATCAGAAGTCTCTGAAGAGCATTGTAGAGAAGTCCAATGCATAGATATACATGAGCATAGAAGAAGCACAAGTCACAAATTCGACCTTTTGCTGCCCCAGGACACCGAGTTCCAAACACCTGAATTAGAGATCTCCAAAGAAGCAGTCCCTCAACCTGATGAAGACCAAGAACTTGAGAGCATAACAAACAGAATGGAAGATCCTACCAGGATGTGCCCTGTCGAGGAGGAGCAACAAGATGAGATCGTAGATACATGTGAATCTAATGGTACCACAGACAATGATGTCAAGCTATATACATGTGATTCTAACATTTCTTTTGACATTCAGAAACCTTACCCTAATGGATGTCTGACTGTAAAAAGGTGTATACTGAGCTCCAAGGATAGGGCGTTGTCTAGAAGTAAAAGCTGCAGGGCTAGCTTTATGATTATTCCAAATAGTTGGTTTGATGATTCCGAGTACACCAGCCAGACACCACCTAATGAAATCTTGAAGCATACCCCAAGAAGGTTTGACAAGGTTAGGAGAAGCTTGTATCCAGAAAATGATAACCCTTCTTCAGTAGACCGTTCTGAGTTTTCTGGTGAAGTTTCTTCTGATGAAGTAGTGAAGGACATGAGCACCATTGATGAAGTAGCCAAAGACATGTGCCCCAGCGACGCAGAACAAGAAACTCTCACCAGTGACATCAGTTGTCTCACCAAGTTGAAGAAGACTGATAGTGACCATGAGGATGAACTTGATGAGTATCAGGATCAGGTAATCATGTCAAGAACTGACCTATGAGCTCTTTTTATTTTTTGGCAGTATTTTCCTTAAGGAGTCGGTAAATACTATCCTATAGTACTTCAATACTAGGTATCCACATCATGCTATACTGTTTTCCTTTTATTTTGATTATGGTAAGGTTTGGTTTTTGACTACCTATTAACTTATTAAAGTAGTAGAAAAAAGAGCCTCCACGTTTACTCTCATGGTCTAGAAAATCCCACATTAATCCAAATAAAATAAGAAAAAGGAGAAAAGAGAATCATATTAGGATTACAATATGTGGAAACGGACAATAAAAACAGATAAAACCCAAAGGAAATGAGGAGTACGTGCAAACGGACAAGGATTATTTATAAACAATATGAAACACCGATTTTGGAAACGGTAAGAGAAACTAATCGTAAACATATATACTCATGCTGTCATGCATGGCCGTGGCAGGCAATTTATTTGTCCATTTTCTAATTGTACAATAGTACATGCCATGCTAATAAATACATTAGAGATAATTATAAGATGCCACTAATAGTCTAAAGAGTATAAAGATGGAGGAAGGAAACAAACAAATATACCAGATGATCCATCACGTCTGCTCTATAGACATAGGAATTACTACTACTTCCGTTTCAGGTGATAAGACTTTCTAGCATTGCTCACATTCATATAGATGTTAATGAATCTAGGCACACATATATGTCTAGATTCATTAACATATATATGAATATGGCCAATGCTAGAAAGTCTTATAATATGAAACGGAACAAGTATATTAATTAGAATATCGTACATTAGTCAATTTGGTTCAGCATGGTTACAATTTAAACTTTTGTTGTAATTTCAATATTTTCTACAACAAAATATGAAAGAATATATGTCATTATGTGAAAAAAAAATTATAGCGATGCTAACCGTGCATTCGCATCGGCCACCATGTTTACTCTTATGACCTATAAATTCTCACTTAAATCAGAAAAAAAATAGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATAATGGATTGGGAATTAGAAAAATAGAAATATTGAAAGAAAAGTCTAGAGTACATATAGTTCCTATAGAACTAATTGAAAGTCAGAATTAGAAAAATAAGAAAAATTAAAAGTAGAGTTTAGATTCTATATAGAAATACAATTTAGAACAACAAAAATTTGAAATTTTAAAAATAAGCAATGTTGGGAGAAGAGTCTAGCATCCTTATAGAAATACAATTTATAAATATCTGAAATTCGGAATTAACAAATAAGAAATATTGTAAAAATAGTCTAGAGTCCATATAGGAATAAAAACTTTAAATAACTGAAATTTAAAAAATAAGAAATATTGGAAGCAAATCTAGAGTCCATATAGGAATACAAGTTACAAAATAACGGAAATTCAAAATTGAAAGAAGAGTTTCGAGTACATATAGAAACACAATTTACAAATAACTAAAATTCAGAATTAAGAAAAATGAATATTGGAAGAGAAGTCTATAGTGCATATATAGGAATAAAAGAATAAAATGTATGAATAATGAAATTCGAAATAAAAAATAAAAAAAAATTGAAAGTTGAGTCTAGAGTCCATATAAAAATACAATCGATAAATAACTAAAATTTAAAAATTAGAAATATGAATATCATGCAGTTGTTAGTTTGATGAAGAATTTAAAATTATGTTGCCATTTTAATATATTTAATAAAATTTGAATATATTTAAACTATTATATGAGAAAAAATATATGATGATGCTAGCCGCGCAATCTGCGCGGGCCACTACGCTAGTTATAACATGAATTGACAGCACACTAGTTCAAAGATTGCAACTGTTGTTGCCTATGCATAATTTGCCAGTCTGTTTTGGCCTACCGATCTGACTTTTATTGTCTTCGTGTATTTTATTTGTGCAGCAGTCTATTAGAGATGGATCTACAACCTTGAGAACTGTCAAAGATGTTGGCATAGATTCATCACTGAGTGCCTCTCCTTCTCGTTGGCCTATTGATTTTGAGAAGATGCGGCAAGAGATTATTCAGTTGTGGCACGAATGCAACGCTCCCATCGTACACAGAACTTACTTCTTCCTCCTCTTCAAGGGAGATCCAGCAGATAACATCTACATGGAGGTGGAGCACAGGAGATTGTCCTTCATTAGGAGGTCCTTCAGTGCCAGCCCTGCAGGAGGCGAGCTTAATTCTGCCGTCGTATCAAGCTACATTGTTACTTGATAGGAGTTTAAAATCAACAACTTGGCTTTGCATTGTCCAGGAAATCTGAATTCCAGCACTCATTCTGTTGACAGCCTGAAAAATCTTCGACGCGAAAGGGACATGCTCTACAAGCAGATGCTTAAGAAGCTCACCAATGGGGAGAAAGAGCGCGTTTACGCTAGATGGGGAATCGATCTGAGCTCGAAACAGCGAAGATTGCAGCTATCTCGTCTCGTCTGGACGCAGACCGATATGGAACACATCAGGGAGAGTGCATCCCTTGTTGCGAAGCTGATTGAGCTGCTGGAGCCAGCACAGGCACTGAAGGAGATGTTTGGACTGAACTTCACACTAGCTCCCCGATCTGAACGGCGATCCTTCGGCCTTCTAGGTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026533

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