BGIOSGA026539

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026539| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026539, complete gene.| tag = OJ1323_...")
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Gene Name

BGIOSGA026539

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026539, complete gene.

LocusTag

OJ1323_A06.23

Ensembl Transcript ID

BGIOSGA026539-TA

Ensembl Protein ID

BGIOSGA026539-PA

Length

5299

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29167480..29172778

Sequence Coding Region

29172695..29172778,29171112..29171173,29170504..29171014,29170339..29170422,29170145..29170251
,29169623..29169854,29169339..29169527,29169089..29169253,29168421..29168564
,29168287..29168343,29167480..29167593

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29167480..29172778 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29167480..29172778 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAGGCCGACGCAGGACGCGATCGACACCTTCGTCGGCATCACCGGCGCCGATGAGGCCGTCGCCGCCCGCAAGCTCGAGGAACATCATGGTGACCTAAATGAAGCTGTGAATGCCTATTTCAATGAAGGAGATAGGACCAGCACCAGAGCCAATGAAAATCCTATACCTACCGGTTATGATGACATGGAGTTGGATGAACCATTTGGTCCTGTTCCTACATTTCACATGCCTTTGGGCAACCCTTTTTCACTTCTGGATCAAGGTTTTTTAGAACGAGCTGCTGCTGTGTATGGTGAGGGACCTCATATTACACACCCTAGGGAGGTGAGGCGGATAGATGTTGAAGTTAAGGACAACAATACTCCAGCAGGTAGTTCTGGTCATGGTCCTGTTATTGAAGATGTTACTGGACATGAGTTTTCACATGGGCCGGAAATTCGTGGGACTGTTCTGATTGATGAAGATGATGATGATGATAACTTGCCATCTGCTCAAGATACTCGTCTCCCAAGCAATCCTTCAACTTCAAACTATTCTGTACCAAGAGCTCCTCCAATTGCTAATGTTAGTGACTACAACAATGACATAGAAGAGGAGATGGTTCGCGCTGCAATAGAAGCATCAAAAAGGGACGCAGATGGACTGACAAATGGTCTAAGAAGTGGAGAACGTGAAAATGCATCACGTGGCAGAGATGATGATGAGATTGCTCGGGCGGTTTCTATGTCCTTGGAGACAGCAGAACAAGAGAGAGTTCTGCGCCAAGTGGGAGCGCATGTGTCTGATCATTCTGATTTATCCGATAAGGAAGACATTGAAGGAGCAACTGGGACAGTGGAAAGGCAAGTACCAACTTCAGGGAAAGTTGGAACATCTGATCAGTTGGTAGATGAAGAGAGTTTCCAGGATGATGACGTTGAGGAACATTCTTTTGTTAGACAACACTCTAGGCGTGTACCATCTGGAAATGATGAGTCCACAGAAGCACTTGAAAGGGCCAACAGTCATCCATCCAGTCTCCTCCCTCATAACATTGAAAACAATCAGCAGTTCAATGGAGTTTTTCCATCAGAGTGGGGTGGCATTTCTTCTGAAGAACATGATGAAGCTGTTATGCTTGAAGCTGCAATGTTTGGTGGAATTCCTGGAAGAGCAGCATATCCATTTTCTCTCCCGTATCATCAAAACTCAAGTCGCTACCCCACGGTTGCTCATCCTCCGTCACCAACATTAACTGCACAACGGTTGTTAAGGGAGCAGCAGGACGATGAGTATCTAGCATCTCTCGAAGCTGACCGAGAAAAAGAATTGAAGGCAGAGCAGGAGGCTGAGCTCCGCAGATTAGAAGCTGCTGCTGAAAGAGAAGCTGCTATTGCAAAGCAAAAACAAGAGGAGGAAGAAAAGCGAAGAAAACAACTCGAGGAAGAGGAATTGGAGTCCAAGCTTGCAGCCAAACAAGCATCATTGCCAAAGGAGCCATTACCAGATGATGTAGGGGCCGTCACTGTTGTAGTTCGCATGCCTGATGGTCGTCGTCAGGGAAGGCGCTTTATGAAATCCGACAACCTTCAGGTCCTTTTTGATTTCATAGATATCTCCAGGACTTTCAAACCAGGAACCTATAGGCTGGTGAGGTCTTATCCCAGGCGTGCATTCACCGACTCTGAGTCTCAGATGTCTTTAAGTGATCTTGGCCTCAATAGCAAGCAGGAAGCCTTGTTTCTAGAGCAGATTTCAGGATAG</cdnaseq>

Protein Sequence

<aaseq>MVRPTQDAIDTFVGITGADEAVAARKLEEHHGDLNEAVNAYFNEGDRTSTRANENPIPTGYDDMELDEPFGPVPTFHMPLGNPFSLLDQGFLERAAAVYGEGPHITHPREVRRIDVEVKDNNTPAGSSGHGPVIEDVTGHEFSHGPEIRGTVLIDEDDDDDNLPSAQDTRLPSNPSTSNYSVPRAPPIANVSDYNNDIEEEMVRAAIEASKRDADGLTNGLRSGERENASRGRDDDEIARAVSMSLETAEQERVLRQVGAHVSDHSDLSDKEDIEGATGTVERQVPTSGKVGTSDQLVDEESFQDDDVEEHSFVRQHSRRVPSGNDESTEALERANSHPSSLLPHNIENNQQFNGVFPSEWGGISSEEHDEAVMLEAAMFGGIPGRAAYPFSLPYHQNSSRYPTVAHPPSPTLTAQRLLREQQDDEYLASLEADREKELKAEQEAELRRLEAAAEREAAIAKQKQEEEEKRRKQLEEEELESKLAAKQASLPKEPLPDDVGAVTVVVRMPDGRRQGRRFMKSDNLQVLFDFIDISRTFKPGTYRLVRSYPRRAFTDSESQMSLSDLGLNSKQEALFLEQISG</aaseq>

Gene Sequence

<dnaseqindica>1..84#1606..1667#1765..2275#2357..2440#2528..2634#2925..3156#3252..3440#3526..3690#4215..4358#4436..4492#5186..5299#ATGGTGAGGCCGACGCAGGACGCGATCGACACCTTCGTCGGCATCACCGGCGCCGATGAGGCCGTCGCCGCCCGCAAGCTCGAGGTGACGCCCACCCGCTCCGTTCCCGTTTGTTCCCCCCATCACCCCCCCCTTCTCCTCCCTTCACCGTCGCCATTCTACGCCTCGGAATGTGTGGGGCTTGGATGCGTCGGGTCTCGAGTTAGGTTTGTTGTGTTAGATGGCGTTGCGCTGCGGCGGGGGATGGGTGGTGCGGGTGCGATGCGCGATTTGCGGGAGGTGATGAGAACGTGGGGGGGGGGGGGATGGGGTTCTAGGGTGTTTAGAGTTGAGAACATTTTGGGGATTGGGGATTGTGTGGTGCAATGCCTTCGAATTTTGAGCTTTTTAGTGATGCATATGCTCTTAGTTTTCTCTTCAGCTTGCGCGGTCAGGAATGCTGAACACGTTAGTGGATTAGTTTATGGGCATTGCTATGGGTACGATTGTGAATTGTCGATTCACGCGGTAGGACATCCAACTTTGTTTATGTTATGGAACTTTGTTGACACAATCCTACTTGGAGTAAGAGTTGGATGGAGTAATTCCTATTTTAATGTTTTTTTTAGGGAAATCCTATTATAATGTCTTGGTCTTCCATTTTGTAGGAAGACCGCTGTTGTCACTGAATGGTTTAATAAATGTTTGCAGATCTGCTTTCTGTAATTTTATTGAACATTGATTTATCTATCGGGCAAGATGGTCTTTATTGATCAATAGTCTTTGTGAGAACAATTTTCAGATTATGGTCCATTGAGTTTAAGCATGAGAAAATTACTTTATTCAATCTTTATGTGGATTTTTGACTAGTACAGCAAATAAGCATTCTGCTTAGTGAATATTTGGACAGGTTAGTTATATTGTTGTTGTTGCAATAACTCTTGCCAATCATTGGTCTGTTTGGAAATGCTCTGTTGGAGTGCTGAGTGAAGTACTGCTTTATACTTGTTTCTTCTGGTTGCAGTAGGAATAACTTAGCATAGTACCTTCTGCACCTCTGCCGAAGATGCTGAATCAGAGTCTGTTGGGCCTTAGCCTCTTTCTTCTTCAATTATGAGTTTGGAAAGATTGTTATCTTATTTTGTTAGGAATCATATATATTAGGATCCTTATTACAACTCCTCTTTATATAAAGGAAATATCAGGAAGAAATAATGCGAGCAAAGTATTACGCTACTTCTTCTGCCTCTCTTCCACTGCATTTCTTCTGCCTCTCTTCCACTGCATGCTTCTGCCCTTTTCCCCGTTACCCTTGAGTACTACTTCTTCCGTTCTGAAATATAAGCATATCTAGGATTCAAATTCTGTACACAATATAAGGATTCCTAGAATACTTGTCCCATTAATCACCTTTCATTCAAATTGTCTCCCCATCTTACCACAGCCACCCCTCATTTAATCAGGACACTATATTCTTCTCTCCTCAAAACTTAATCTATGCTAAACAACCTAGAACTGCATATATTTGGGAATGGAGGGGGTACAACACACAGAGGCATACACAAAGTCCTTACACAAGTAGATATTTCAAAACGAATTTCTAACTGACTAAAATCATTCTACCAGGAACATCATGGTGACCTAAATGAAGCTGTGAATGCCTATTTCAATGAAGGAGATAGGACCAGGTACGTGTTTTTTCTCCTAGCGGTTCTTATGTGCATTTATTGACCTGATACCATGTTGTTCCCGTTGTTATATTTAACTGACTCATACAATTTTCAGCACCAGAGCCAATGAAAATCCTATACCTACCGGTTATGATGACATGGAGTTGGATGAACCATTTGGTCCTGTTCCTACATTTCACATGCCTTTGGGCAACCCTTTTTCACTTCTGGATCAAGGTTTTTTAGAACGAGCTGCTGCTGTGTATGGTGAGGGACCTCATATTACACACCCTAGGGAGGTGAGGCGGATAGATGTTGAAGTTAAGGACAACAATACTCCAGCAGGTAGTTCTGGTCATGGTCCTGTTATTGAAGATGTTACTGGACATGAGTTTTCACATGGGCCGGAAATTCGTGGGACTGTTCTGATTGATGAAGATGATGATGATGATAACTTGCCATCTGCTCAAGATACTCGTCTCCCAAGCAATCCTTCAACTTCAAACTATTCTGTACCAAGAGCTCCTCCAATTGCTAATGTTAGTGACTACAACAATGACATAGAAGAGGAGATGGTTCGCGCTGCAATAGAAGCATCAAAAAGGGACGCAGATGGACTGACAAATGTAAGACTGTTTATCAGATATCTACTTCTAAAAATTTGGAACCTACACATCTTTTTTATCAAAACATTTGGTATTATGCAGGGTCTAAGAAGTGGAGAACGTGAAAATGCATCACGTGGCAGAGATGATGATGAGATTGCTCGGGCGGTTTCTATGTCCTTGGAGGTAGTTGTTGAACACACAAAGTTCTGTTTTTATGTGTTCTGTTTTTTGTGTGTTATGCTGAATTCATTTTTTTTTGTGACTATTTAGACAGCAGAACAAGAGAGAGTTCTGCGCCAAGTGGGAGCGCATGTGTCTGATCATTCTGATTTATCCGATAAGGAAGACATTGAAGGAGCAACTGGGACAGTGGAAAGGTGTCCATCAAATATATTGTCTAACAATCTATGCATGTGTGATTTTTCATTATATTTGGTTATTCATATATCAAGTTTTATTAGGTTCCTAGTTACTCAATGTCCATTGTTCCATGAATCTTGAGTTCTCTTAATGGTTTCAGCTTCATAAAAGCAATGCATTCTTGCAGCTGCACCTACCATATTCTTTGGATATCTTTTTTGTTATTAAGTTTGTTGTGATTAGCTGAGCATGAGCTTCTTCTATCTAGTTGTGACTGATTCATTGTACATATTATTTCTTGTTGTAGGCAAGTACCAACTTCAGGGAAAGTTGGAACATCTGATCAGTTGGTAGATGAAGAGAGTTTCCAGGATGATGACGTTGAGGAACATTCTTTTGTTAGACAACACTCTAGGCGTGTACCATCTGGAAATGATGAGTCCACAGAAGCACTTGAAAGGGCCAACAGTCATCCATCCAGTCTCCTCCCTCATAACATTGAAAACAATCAGCAGTTCAATGGAGTTTTTCCATCAGAGGTGGTATTTTAATCCATCACACCTGTAATGAGATAGAATTTAACCATACTACAGCTTCTTCACTGCTTACAAACCCGTTAATTTTTGTTGCAAAGTGGGGTGGCATTTCTTCTGAAGAACATGATGAAGCTGTTATGCTTGAAGCTGCAATGTTTGGTGGAATTCCTGGAAGAGCAGCATATCCATTTTCTCTCCCGTATCATCAAAACTCAAGTCGCTACCCCACGGTTGCTCATCCTCCGTCACCAACATTAACTGCACAACGGTTGTTAAGGGAGCAGCAGGTATAGACTTTGGAGTAGTATCTATCTGTGGGATAACATAACAACGGCTGCATGCAAGTATGTTAACCTGGTGTTTGAATTGTAGGACGATGAGTATCTAGCATCTCTCGAAGCTGACCGAGAAAAAGAATTGAAGGCAGAGCAGGAGGCTGAGCTCCGCAGATTAGAAGCTGCTGCTGAAAGAGAAGCTGCTATTGCAAAGCAAAAACAAGAGGAGGAAGAAAAGCGAAGAAAACAACTCGAGGAAGAGGTAATTGAGTTAGTAGTTAGCGCGTTTGAGAGTTGAATGGATAGTAGTCATAGAACTGTTCATACATTAGTTATATTGGCATATAACCATGCTAATCATATCGTTATGGTTTATTAAATTAAAGTCATGCCACACTGTTGGCAGGCCAGTGTGCTTGATGAATTTTATCATTAGTGCAGATACGATTGCATGTCGGTAACAATGTCTGGATTGTTGCAAGTTATATTGCTTTACTTGTTTCTTATCTGGAGGACTTCTCAGACTAACTAACTCCTTAGGTCTGATGAGAAACATTCTTCTGTATTCTTCTGTAAATTATGTCATTAGTAGTAAGAAAAGGTAGTTAAAAGCTAGCACTATGATCTGACTGTGACCATCTTTACCATCTACGTAATATCAAATAAATGATAAGGAAGTAATTATGTGTCCTTTAGAACTTGCCTACTATGCCTTTTCCATGGTTTGTGTTATTTTCACCACACAGTGGTATATTGATTATGTTATTTATGGCAATGTGAGAATAGGAATTGGAGTCCAAGCTTGCAGCCAAACAAGCATCATTGCCAAAGGAGCCATTACCAGATGATGTAGGGGCCGTCACTGTTGTAGTTCGCATGCCTGATGGTCGTCGTCAGGGAAGGCGCTTTATGAAATCCGACAACCTTCAGGTAACATTCTTTTAGTTGCCAGAATACCTAATGAAACTCACTGGTATTCCCTCAATAAATTTTTGGAATTCTTGCAGGTCCTTTTTGATTTCATAGATATCTCCAGGACTTTCAAACCAGGAACCTATAGGCTGGTAACTTTGCTAACCTTTTCATTTTTTTCATGGTGTTTCAGGAATGTTCTATACACAGAAATCAGTGTAGTTTACCATTAACCTGTTGAAACTGGATTTGCACTAGCACAAGCTGGTTATTTACGCCAGCACAAAAAGAAAAAAAAAACGATGATTCTGCCTGCTTTTATGTCATTATGTGTCAGTTTATTTTGCTATTAGTGTTATCAAGTATCATGTACCATTCCTAGAATAGATCAATTTCTGAACTATGTGATTTTAAAAGATTTAACATCAATACTGGAGGTTGTCTGATAGTCAGCGTACTCATCCCGTTGAACTAGGTCAGGATAATATGCCTGTGGCATGGTAGACTGTAAAGAGATTACATTGAAACCGCAGCACCAGCTATTTTTTAGCACTCACACAACATTTAGTGGGCATGCTTTTTATTTTCATTCCTCTGTTTAGGTCCCTAAGATTTAGGATTTTGTTTGAATATCGTATACACAATGCATTCTAGCTTGTTGGTTTTGCCATGTTGTGATATTTGGATTATAAAAAAAAAACTAGTTACTTCACTAGCCTGTAAACAGGGGAAAATTAATGCATGGGAGATTTCATGTTGTTTCTGTTTTATAGCATTTTTAGATGTTGCTGATTGAATCTTGTGGTCCTGAATATTAAATATAAATGAAAATCTACAATGTGCAGGTGAGGTCTTATCCCAGGCGTGCATTCACCGACTCTGAGTCTCAGATGTCTTTAAGTGATCTTGGCCTCAATAGCAAGCAGGAAGCCTTGTTTCTAGAGCAGATTTCAGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026539