BGIOSGA026543

From RiceWiki
Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026543| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026543, complete gene.| tag = OsJ_281...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026543

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026543, complete gene.

LocusTag

OsJ_28164

Ensembl Transcript ID

BGIOSGA026543-TA

Ensembl Protein ID

BGIOSGA026543-PA

Length

7912

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29124837..29132748

Sequence Coding Region

29132165..29132748,29131220..29131728,29124837..29125606

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29124837..29132748 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29124837..29132748 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACCTGCCGGACGACCTGTTGCTGGAAGTCCTCCGCCGCCTCCCGCCGATCAGCCTCGACGCGTCGCGCGTCATCTGCAGCGCATGGCGCGCCGCCGTCGACGCCAACCGCCTCCTGCGCGCGGACCTCCTCCCCCTCTCCGTCGCCGGCATCGTCGTCAACCCCCTCTCCCTGGGCTCGCGCTTCCTCTGCCGCCCCAATGCCGCGGCGACCATCGCCGACGACCTCGACGACATCCGCAACACGAGCAGAGGCATCTTCAACCGCTTCGATTTCCGAGTCAGCGACCACTGCAACGGCCTCTTCTTGGTCGACGACGACGTCCAGCACGTGGTTAACCCGGACACGCGGCAGTGGGCGCCATTGCCGGGCTATCCACCGCCGCATCCGTGCTACCCGCACAAGCTCTTCTCCCCCACCATCTGCCTCGTGTTCGATCCCGCCGTATCGCCTCACTTCGAGGTGTTGGTGATTCCGCGGCTCCGCTCCGAATTACGCAGGCCACGAGAATGGCCGCCGTCGCCGTTCGTCCTGCGTGCTTTCTCGTCTAGGACGGGCGGCGATCAATGGGAGGATAGGATATCACTATCAAACGGGACTTACCGTGTGATTCAATCGGAGCCTAGCATGTCGCTGAGATATAGGGAGAAACATCCAGACCTTTATCTTGGGAAATCAGAAAAGGGGGTACATTGTGCACGCGTTAGTTTCGACCATCTTATGGTGTGGTTCCTTAGTGAATCGCATGGTCAGATGAAGTGGGTGTTGAAGCATCGTAGCCGAATTGCATCCTTGCTACCTCGTCGCACCACCTACGAAGAACAGAGTGGGGAATCATGGATCTTACATGGTGCTAACTATCAAGGAGATTTTCACGCTGATGCTGACGATGTATCATGGATGTTTAATTTGGAATGGCAGAGGGACTCTTATGATGACGATGACGATCATCATGAGGACAAGCGCCATGCCAAATATGTTACTTTCTTAGGATTCCATCCTTTTGATGAAGAGGTTGTGTTCCTCGGTGAAACTTTCAGAAGGGGATTTGCCTATAATCTGAACAACTCAGAGATCCAAGACCTGGAGCTCGACGACGACGTTGTCCGGGCGGACGGCGCGGAGCACCCGCTCGACGTCGGCGACGGACTCCTCGGAGAGGTGGGACGTCCCGAGGATCCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATCTTCCCGCACTCCCTCAGCTGCGCCGTGTCGACGCGCGTCGGGCACGAGCTCGGCGCGGGTCGTCCGGAGCGCGCGCGCCTCTCCGCCCGCGTCGGGCTCGCCTGCGGCGCCGCGCTCGGCGTCGTGGCGTGCGCGTTCGCGGCGTCCCTGAGAGGGGTGTGGGCGCGGATGTTCACCGCCGACGCCACCATCCTGCGGCTGGCGTCGTCGGCGCTGCCCATCCTCGGCGCCGCCGAGCTGGGGAACTGCCCGCAGACGGTCGGCTGCGGTGTGCTGCGCGGCAGCGCGCGGCCGGGGAGGGCGGCGAGGATCAACGTCTCGGCGTTCTACGGCGTCGGCATGCCCGCCGCCCTGGCGCTGGCGTTCTGGCCGGCGCGCCTCGACTTCCGCGGCATGTGGGCCGGCATGCTCGCCGCGCAGCTGGTGTGCGCGGCGCTGATGCTGCTCGCCGTGCGGCGCACCGACTGGGACGAGCAGGCCGCCCGCGCGCGCGAGATCACCGGCGCCGTCGCCGGCGTCGTCGTTGGCGATGGCGACGTCGTCGTCAAAGGCGATCATGCAGACGCCGCCAAAGTAAAGGCAGACAGTGGCTTGCTCGTGGTCACAGTGCTAAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MEDLPDDLLLEVLRRLPPISLDASRVICSAWRAAVDANRLLRADLLPLSVAGIVVNPLSLGSRFLCRPNAAATIADDLDDIRNTSRGIFNRFDFRVSDHCNGLFLVDDDVQHVVNPDTRQWAPLPGYPPPHPCYPHKLFSPTICLVFDPAVSPHFEVLVIPRLRSELRRPREWPPSPFVLRAFSSRTGGDQWEDRISLSNGTYRVIQSEPSMSLRYREKHPDLYLGKSEKGVHCARVSFDHLMVWFLSESHGQMKWVLKHRSRIASLLPRRTTYEEQSGESWILHGANYQGDFHADADDVSWMFNLEWQRDSYDDDDDHHEDKRHAKYVTFLGFHPFDEEVVFLGETFRRGFAYNLNNSEIQDLELDDDVVRADGAEHPLDVGDGLLGEVGRPEDPXXXXXXXXXXXXXXXXXXIFPHSLSCAVSTRVGHELGAGRPERARLSARVGLACGAALGVVACAFAASLRGVWARMFTADATILRLASSALPILGAAELGNCPQTVGCGVLRGSARPGRAARINVSAFYGVGMPAALALAFWPARLDFRGMWAGMLAAQLVCAALMLLAVRRTDWDEQAARAREITGAVAGVVVGDGDVVVKGDHADAAKVKADSGLLVVTVLS</aaseq>

Gene Sequence

<dnaseqindica>1..584#1021..1529#7143..7912#ATGGAGGACCTGCCGGACGACCTGTTGCTGGAAGTCCTCCGCCGCCTCCCGCCGATCAGCCTCGACGCGTCGCGCGTCATCTGCAGCGCATGGCGCGCCGCCGTCGACGCCAACCGCCTCCTGCGCGCGGACCTCCTCCCCCTCTCCGTCGCCGGCATCGTCGTCAACCCCCTCTCCCTGGGCTCGCGCTTCCTCTGCCGCCCCAATGCCGCGGCGACCATCGCCGACGACCTCGACGACATCCGCAACACGAGCAGAGGCATCTTCAACCGCTTCGATTTCCGAGTCAGCGACCACTGCAACGGCCTCTTCTTGGTCGACGACGACGTCCAGCACGTGGTTAACCCGGACACGCGGCAGTGGGCGCCATTGCCGGGCTATCCACCGCCGCATCCGTGCTACCCGCACAAGCTCTTCTCCCCCACCATCTGCCTCGTGTTCGATCCCGCCGTATCGCCTCACTTCGAGGTGTTGGTGATTCCGCGGCTCCGCTCCGAATTACGCAGGCCACGAGAATGGCCGCCGTCGCCGTTCGTCCTGCGTGCTTTCTCGTCTAGGACGGGCGGCGATCAATGGGAGGATAGGTCCTTCGTTCGGGAAGGCCCCCGGCCTACGTACAAAAGGCAGACTTGAGTTTCGGCGGCTACTATCGCGTCAAACAACAGCAGTGTTGTGTCTATTGCAAAGGAGCGCTCTATGTGAATTCAGGCTAACAATTTCACTATCAGGTAACTATCTATATATCTATAACTTCAATTCTTGGCTATCTTTATTTACTTTGGTTATTGTTGTTCGTTGTTGTTGTACAATTCACATAGTGATTTGCTCCGGTCTAGCAAAAAGTACATCAAGGTACCGATACCTCACGGTACCAAATCATTTCTGATCGTTGGATTTGTATCTCGAGGTACTTTTTTATGAACCAGAGCAAATCTCATTCACACACACACACACATATATATATATATATATATGCATAATTTACTAATGTATGTTATCCTGGCCTTTTTTTTTCCATAGGATATCACTATCAAACGGGACTTACCGTGTGATTCAATCGGAGCCTAGCATGTCGCTGAGATATAGGGAGAAACATCCAGACCTTTATCTTGGGAAATCAGAAAAGGGGGTACATTGTGCACGCGTTAGTTTCGACCATCTTATGGTGTGGTTCCTTAGTGAATCGCATGGTCAGATGAAGTGGGTGTTGAAGCATCGTAGCCGAATTGCATCCTTGCTACCTCGTCGCACCACCTACGAAGAACAGAGTGGGGAATCATGGATCTTACATGGTGCTAACTATCAAGGAGATTTTCACGCTGATGCTGACGATGTATCATGGATGTTTAATTTGGAATGGCAGAGGGACTCTTATGATGACGATGACGATCATCATGAGGACAAGCGCCATGCCAAATATGTTACTTTCTTAGGATTCCATCCTTTTGATGAAGAGGTTGTGTTCCTCGGTGAAACTTTCAGAAGGGGATTTGCCTATAATCTGAACAACTCAGAGATCCAAGACCTGGGTAACTTGTGCCCAAAATTCTATGATCTCACTTGTCACCAGGCGTTGATACAAACGTCTTTTTTGTACACGCCTTGCTGGATTGGATTAGAGAGAGCTCTCTCTCTCTCTCTCTCTCCCTGTAAATAGCTAGTAGTAATTTAGAATCTCACCTTGTTGTAGATTATTTTGAGTCTGTGTTTTAGTGGCAAGCAGATGAAGAGAGCAGATGTACTATTTCATCCCAATATATACTTACATTAGTTTTAGTAGCATCAATCTTTGAAATTTTTAGGATTATATGATATCTTTCTTAAGCAATAATATATATCCATGGCAAGAGTACTGCATGCCACATTACTACACTGAACATGCTTAATCAGCAAAAGAAAACCTGTAGCACCGCACGATATCCACAAAATCCATCGAACTAATTAAACAAATATACACGGACAGGAACGACTCAACAATTCAACGGATCACTGATGAAAGGATTGATGCTCTAGCTGCTACACATGGCCAAATGGTCTTTCTTTACAACAGCAGCTAGCGGAGGAGTGTTGTTTGTGTGGATGGAAATGGAGCTACTAGTCCTACATGGATAAACTCCGCACGTCAGTCGCCCTGGTGGTCGTCGCTGCATGCGCTTTCTGCACTTTTTTTCTGAACTTTTTGCTTACAAAACCCTGCGCTTTTTGCCCTTTTCCCCGACGAGTTGGGCGGTTATGGCGAGGGTTGGGTTTCTGGACGCAAGTTGGCAGCGGTGTAGCACGCAGGATTGATTGCACGTTCGTTGCAGCATTGAGAATCTGCTGGCTTTCGCATACCGGCGGCCGGACGTGTACGACGCCGGTTTTGGGCTCGAGACCAAAAACGGGTGGTGGCGTCCTTGCCTCTATTGGGCTCTGACGAATGCTATGTTTATCCGGATGAGGTAGTTAGCCTACTAGTAGTAGAAGAATATTTGTTTCCGTTTTAAGGCTTATTGTTTGATTAATCGCCGATCGAGATTGTCATAGTGGAGTGCTACTCTACGAGTTGATGATGGGCCGACCAACGAGAATGGCTTACTCCCTCAATACTAAAAAAGAATAAAACTATTTTTACACCTTTCGACCAAGCATAACTTTTTTTATTTAATTTATTCAATTATTTTTTTTCTTCTTAATAAACTAATCATTACTATTTTTTATTTAATTTATTAATTTTCTTCTAAAGCAACCATAACATTTTACATCCACTTTCTTGATCCACATGAAAATATTATGCTGATATGTTTTTTCTTTAAAAACATAGTATAAATCCAGGCGCTCACAGAGAATCTATTACGCTCACTTGGTTCTGTGCTGGCATGTTGACCTTCATTTTCTGTGAAACTCTGGATGCAGAAACATTTATTCAGTTTAAGGTTGCCCATTCCATTCCAGAGCGAGTGCGACCTGTGCACGCCGTGACCACCAATCAGCATAGACCAAGACAGCAAGAGTGACTAACCAAGCCCTTTTCCTTCCACGGCTGCACCTCTCGCCCACGGGACCAAACCAAACCAAAACCATTGCCACCCCCACAACCTTCCACCTCTCGTCACAAGCCGCTTACAAATACTCAGCGTTCCAAACCACCATTTCCCACCACAAACACCTCCATCACCACCACCACGGCACCACCACCTCCAAATTCCAATGTGTACGAGCAAACTAGAGGAGATCACCGGCGAGTGGCCGCCGCCGGCATTGCAGGCCGCCTCCACGACGTCGTCGTCGGAGCCGTGCCGCCGCCTCTCGCCGCCCAGCAGCAAGCGCCCCGCGGGGCGCACCAAGTTCCACGAGACCCGCCACCCGGTGTTCCGCGGCGTGCGGCGCCGCGGCCGCCCGGGGCGGTGGGTGTGCGAGGTCCGCGTGCCGGGCCGCCGCGGGTGCAGGCTCTGGCTCGGCACGTTCGACGCCGCCGACGCCGCCGCGCGCGCCCACGACGCCGCCATGCTCGCGCTCCGCGGCCGCGCCGCCGCGTGCCTCAACTTCGCCGACTCCGCCTGGCTGCTCGCCGTGCCGCCCCCGGCCACCCTCCGCTGCGCCGCCACGTCCAGCGCGCCGTGGCGCGGGCGCTGGAGACTTCGAGCAGCGGGAGTCATCATCGTCCGTGTTCCCACTCGCCATCGACGTCGTCGCCGAGGACGCCATGTCCGCCACGTCCGAGCCGTCCGCCGCGAGCGACGACGACGCCGTCACCAGCAGCAGCAGCACGACCGACGCCGACGAGGAGGCATCACCGTTCGAGCTGGACGTGGTGAGCGACATGGGCTGGAGCCTGTACTACGCGAGCTTAGCGGAGGGCCTCCTCATGGAGCCGCCGGCTTCCGGCGCATCGTCCGACGACGACGACGACGCCATCGTCGACTCAAGCGACATCGCTGACGTGTCTCTGTGGAGCTACTAGCATTGAAGCAGACGCGCGTCATGCTCTTGTACATAAAAGAGTGACTTCCTAATTAACAGCAGCTGAGCATGTATGGCCTTGTATATAGGGTTTTTTTTTTTTTGATCGCTGTACATTTTTCCTACCTCTGGAATCTTTGATTCCTATGTACGGTTTCCTCATTTCGGCATGTTTTGAGTGATTGAGAGTGAAATTATAAAAAAATGTCATGCATAATCAAAGACTAGGGAGGACCAAAATATTGCAAATGAACATTGTTTGTGTGTCGCTACGTTTCATTAATAGTGTAGAAAGCCAAAGTTATGTTTTACCCCGAAACGGCTAAAATTCACCACCGGTTTTTAACTCAAATCCCTTAATTTCAACTCAAATCAGGGGGCCGTTCCAGGGTTCCATATTTCAGGCTGAAAGGCATTGTTTCGCTAGAATACTATTTTTTTCAGTTAAGCAAAATTTGATCATATTCAACTTTGTTTTTCTAGTTTTTGTTTTTTTTTTTGAAATTTCAATTCTACCCGATCCCCTCGAAATGTTTTTTATTTATATCCCTGGATAGTCCCAACGACATCTACTACTACTTAAAAAATAAGAGGTGCTTCCATCGTCCGTCAAAAAAACCGTGTAAAAAAAACCAAAAAAAACCGGACAGAGTCCGATCCACAAAAAAAGCCGAAAAAACCGAAAAAACTAAAAAAAAGGACCGGTCCGTCATCCGTGTTTGAGTCGGTTATAAAAATTGAAGATGTTTCCGCGGTTCGTCATCCGTGTTTGAGTCGGTTTTAATTTTATGTTTTGGTTTTAATCTATATCTCTTCTCTTCTCTATCTCTATCTCTATCTCTACTATTATAAAAATTAAACTGTTCATTATTCAGCACAGCAATTTTTAATCAGGCAGGGGAATGCTTGTGCAAAATTTTGCGACGTGCTGTTAAAATCGATTTATATTTCTCCATTGTCCCTATCAAGATGCTTTCTTCTTTACATTAAAAAAGAGTGATGATTTTCTTTTAGCAGGTACAATTCTAGATGATATATTGTTATCAGGTGAAAAAAAAGCAAAAAAGAACCTTCGAAAAAAACAAGCAAAAAAACGTGCGAGAAAACAAGAAAAAACACACGAGAAAAGAAAAGCAAAAAAAGGAGAAAAATATGGTTTTCTTCGTAAGTGAAAAAAGCGAAAAAAAACATGGTAGGAGAAAACTGTTAGAAAGAAATGCGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGAGGTTGATTTCCACATGCTTCGCGGGTAAAACATACGTAATCCCTCCCGTCCAAAAAAAAAAGCCAACCTAAAAAATATGATCCCTTCTAATCCAGATTTATTATACTAGAAGGGAACACATCCCCTCTTAAATTGACTTATTTTTGGACAAAGGGAGTACGTACGTACTCGATCGATACTACCTAGCGGACCTGTACATATGTCTTATGGGTGGCGGGCATACATGGCCATTATTCATTTGATCGGGAGCTACCTTGGGAAAAATATATACTGCTAACTTTAAAAAATAATGTAAACCTATAAATCATTGTACTATTTAAAAAATATGTATACATATGATCACTCTAATTAAAAATTTGATGTGGATAAATTTAATACGTCCATTTCTCAATACTCCCTACATCCTAAAATATTTGACGCCGTTGAATTTTTTAAAAATATTTGACCGTTCGTCTTATTTAAAAAATTTAAGTAATTATTAATTCTTTCCGTATCATTTGATTTATTGTTAAATATACTTTCATGTATACATATAGTTTTTACACATTTCATAAAAGTTTTTGAATAAGACGAACGGTCAAATATGTTTAAAAAAGTCAACGGTACCAAATATTTAAGGAATGAGGGAGTACTATGTTAGTTTTCAGTTTGGCACTATAAATATGCGATTTTCATTACATGTTTTCGATCCCTTCCCTCCCAGCTTTGCACCAATAATAAACACGTACTCCAGCTTTGCACGCCTGATACTACCGTGAGCCTGTGCATTTCGGGCCTACAGCTACATATAACAACACCTCCAACTGTTTTGTAAACTGTATAATATTTTTGTATCTTCGATTCTCACACGAGCACTTTGATTCCCTGTATGTATATGTTCACTGATCTAATTTACTCTTACGGGAATAGTAAATGAACGAATGATCCATGCTATGAGCAAACGGGCACAGCTAGCTAGAAATGGCTCTTCGCCTGCTCTGAAACTCATCGCACGCATTGCTTGCTTCATCTCCTGTTCTTCAATTAACTATACATAATCATCAATGATAGACTAATTACTATACATGATCATCAATCATAGACTGATTACTATTGACTGTATTTAATTTGAGTACTTGTTGATGAAGTCATATTCGATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTCTCATCCCAGCTAAGGGATTTCCAAGCTCGTTCAAGCTGCAACAACAACTTGGCATGAGCTTCAGAAAACTTATCATTTATATTTTGCGCAACTGCAAATCGGAAAAGAGTTCGCAGATATATAGTAGTAGTTGTATATATACAGTTATTTCAATTGGACGATCCCCAAGAACGAGCTGAGCGCCAAGATCTTCAGACACCTTCCTAGCCGCTCGGAACTAGCAAATGATGGAGTAAAAGAGGAATTGTTTTCAAGAGTTGAATTAAATCATCAGAAAAAAAATGAAAACTAATGACAGGAATAATTTAATTACACCTCTTCTCCGAAGGGCCGGTTTGCACCAGAAGAGATCTTTGAGGAGAAAACGGCAAGAAGCAGACGCAGAGCAAGTGCAGTCTGCCCACCTGCAAGCATCGTCCCAAGCAGAAAAGAATTACCATCTTCTGGCTGATTGGCAGTAGGATTATATCATTGTAGAGTGAAAAAGAATTTCAATTACCCAGATTGATGCTCCGGTTGACGGCTCCGAAGAACTTGGAGCCACCGAGAGAGAACATGTTGGATTTGAGGAGCGGCTCGCCGGCAGAAGAATCGGTGGTCACGTACATGATTCCAGCTCTGCAGTGAAGGCTCTGCAATGGCAGCAATTAGCTCAAGAAGAGATTTCACGGCCATGTCTGACTGAGCAGGCCTAGCTAACGACGATCTTGCCTGCTCCGGCAGAGCTCGACGACGACGTTGTCCGGGCGGACGGCGCGGAGCACCCGCTCGACGTCGGCGACGGACTCCTCGGAGAGGTGGGACGTCCCGAGGATCCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATCTTCCCGCACTCCCTCAGCTGCGCCGTGTCGACGCGCGTCGGGCACGAGCTCGGCGCGGGTCGTCCGGAGCGCGCGCGCCTCTCCGCCCGCGTCGGGCTCGCCTGCGGCGCCGCGCTCGGCGTCGTGGCGTGCGCGTTCGCGGCGTCCCTGAGAGGGGTGTGGGCGCGGATGTTCACCGCCGACGCCACCATCCTGCGGCTGGCGTCGTCGGCGCTGCCCATCCTCGGCGCCGCCGAGCTGGGGAACTGCCCGCAGACGGTCGGCTGCGGTGTGCTGCGCGGCAGCGCGCGGCCGGGGAGGGCGGCGAGGATCAACGTCTCGGCGTTCTACGGCGTCGGCATGCCCGCCGCCCTGGCGCTGGCGTTCTGGCCGGCGCGCCTCGACTTCCGCGGCATGTGGGCCGGCATGCTCGCCGCGCAGCTGGTGTGCGCGGCGCTGATGCTGCTCGCCGTGCGGCGCACCGACTGGGACGAGCAGGCCGCCCGCGCGCGCGAGATCACCGGCGCCGTCGCCGGCGTCGTCGTTGGCGATGGCGACGTCGTCGTCAAAGGCGATCATGCAGACGCCGCCAAAGTAAAGGCAGACAGTGGCTTGCTCGTGGTCACAGTGCTAAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026543