BGIOSGA026546

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026546| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026546, complete gene.| tag = P0623F0...")
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Gene Name

BGIOSGA026546

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026546, complete gene.

LocusTag

P0623F08.34

Ensembl Transcript ID

BGIOSGA026546-TA

Ensembl Protein ID

BGIOSGA026546-PA

Length

6148

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29104199..29110346

Sequence Coding Region

29108373..29110346,29107557..29107637,29107393..29107473,29107206..29107288,29106599..29106683
,29105919..29106044,29104199..29104462

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29104199..29110346 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29104199..29110346 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCTTGCTCATCAACAAGTACCTGTCCAGGAGCAAGAACCCGGCAGCCGGCGACGACAAGGAGATGCCACCGCCGCCGCCGCCACCGCCGGCGAACGGAGCGGAGCGTGAGTTCATGTGCATCCCCGGCTGCGTGCCGGTGCGCGTCAAGAGGGGAACCACGACGACGACGACGACGACGACCACGGCGAGGACGTCGCGGCACAATTTCGTCAAGTCGGCGGCGTCAGGGCTGTTCCCCGGCGCGCAGTTCACCAACCACGAGTCGCTCCCGGCGATGGAGGAGGCGTACGCCGAGTTCGTCGCCGCGTTCCCGCAGTACGCCGGGCTCGCCCAGGCCGACGCCATCAGGGACGGCGAGTACCAGCACCTCGACCGCCACGTGTGCCTCGACTACACCGGCATCAACCTCTTCTCCCACGCCCAGATGAACTCGTCGGTGCCGTCGACGTCGGCCACGCCGCCGGCGTCGTCGTCGGGCGCGGCGTGGCAGCCGCCGTTCTTTGACATCGCGTACAAGTCCACGAGCCTGCGGTCGCAGGTGCAATGCGGGGACGACGTCGCGGCGCCGTCCGCGGCGGGCGGGATCGGCGGCGCCGTGACGAGGCGCGTCATGGCGTCGCTCAACATCCCCGACGACGAGTACGCCATGGTGTGCACGGCGAACCGGACCACCGCGTTCCGGCTGCTGGCGGAGTCCTACTCCTTCCAGCAGCACGGCAAGCGGCTGCTCACCGTGTACGACTACGAGAGCGAGGCGGCGGGCGCGATGGCGGAGAGCGCGCGCCGCCGCGGTGCGGAGGTGATGTCGGCGACGTTCGCGTGGCCGGGCATGCGCGTCCACGCCGCCGACCTCCGCAAGAAGCTGCTCCGCGGGAGGCGGCGCGGCGGCGGCGGCGGGCACCGGAGGGGGCTCTTCGTGTTCCCGCTGGTGTCGCGGATGACGGGGGCCAGGTACCCATACCTGTGGATGAGCGCGGCGCACGAACAAGGGTGGCACGTCGCGCTCGACGCGTGCGCGCTGGGCACCAAGGACCTCGACACGCTGGGCCTCTCCCTCCTCCGCCCGGACTTCATCGTCTGCAACTTCTTCAAGGTGTTCGGCGAGAACCCCTCCGGCTTCGCGGGCCTCTTCGTCAAGAAGTCCAGCCTCGCCGCGCTGGAGCGCTCCGTCATCGCCCGCAGCATCGGCATCGTCAGCATCGTCCCCGCACGCCGCTGGTCGCTCCACGACGGCTACTCCACCGAGCTCGACCCGGTCGCCGCGGCGGCGGACGACCTCGACACCACCAGCTCCTTCTCCGGCCCACTCAGTGGCACCCTCATCGCGCTCACACTCAAGAACGTACCGGAGATGGACGCCGCAGGCGAGGAGAACGGCCACTCGCCGGAGATCCGCGAGGCCGATCCGCCGCCACCACCACCGCCAATAATGGAGGTGGAGTGCAGGGGGCTGGACCACGCGGACGCGCTGGGGCTGATCGCCATAGGCAACCGGCTGAGGTGCATCAGCAACTGGCTGGTGGTGGCGATGCAGAAGCTGCGGCACCCGCAGTCGGAGCAGGGGAAGGCGCTGGTGCGGGTGTACGGGCCGCGGGTGAAGTTCGAGCGGGGGCCATCGCTGGCGTTCAACGTGTTCGACTGGAAGGGGGAGAAGGTGGCGCCGCCGCTGGTGCAGAAGCTCGCCGACCGCCACAACATCTCCCTCACCTGCGGCTTCCTCCGCCACATCTGCTTCTCCGACAAGTACGACGCCGACAGGGCCGCCGTCCTCGAGCACATCGACGGCGGCGGCAAGAGGAAGGACGCCGCCGGCGAGATGGGGATCTACGTGGTGAACGCGTCGCTGGGGTTCTTGACCAACTTCGACGACGCCTACAGGTTGTGGGCGTTCGTGGCCAAGTTCTTGGACGCCGATTTCGTGGAGAAGGAGCGGTGGAGGTACACCGCGCTCAACCAGAAGACGGTGGAGTTGCTTCTTGATTTGCTGGAATTCCGTGAACAAGCTCTTCGACTTATTTTAGATCTGAGCAGCACAGTCATAACATTGCTGCCACATCAGAACTCTTTAATTCTTCATGCTTTTATGGATCTCTTTTGCTCTTTTGTGCGAGTTAACCTTTTCTCTGACAAGATACCAAGAAAGATGATCCTCCAAGTTTACAATATCTTGCATATCATGCTAAAGGGTGGCCGTGATTGTGAATTTTATCATCGATTGGTTCAGTTTGTGGACTTATATGATCCACCAGTCAAGGGGTTGCATGAAGATCTAAATTTTGTGAGCCCACGTATTGGAGAGGTCCTGGAGGCTGTTGGCCCAATTATCTTTCTTTCAACTGATACAAAAAAGTTAAGAAATGAAGGGTTCCTCAGTCCATTTCATCCACGTTATCCTGACATCCTTACAAACTCTGCTCATCCTATGGCAGTGGCGGCGGTTGCGGGCGGTGTTGCGGTGGCCGCGACTGGCGGCACGTGGTGGCGTCGGCATCGGCTCGCGAGCGGCGGCGTCGACAGGCGACTCGCGTGCGGGGGCGTCGGCAGAAGGCAGCCTGGGCGACGGCGCTTGCGCGGCGGCTTGGGAGGCGGCGGAGATGCGTGGGCCTCCCGGCTGCGGCGGCAACGTCAAGGCGGCGCCTACAAAGTGTTCGATGAAATGGTGACAAAGGATGTAGAAATGTGGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MLLLINKYLSRSKNPAAGDDKEMPPPPPPPPANGAEREFMCIPGCVPVRVKRGTTTTTTTTTTARTSRHNFVKSAASGLFPGAQFTNHESLPAMEEAYAEFVAAFPQYAGLAQADAIRDGEYQHLDRHVCLDYTGINLFSHAQMNSSVPSTSATPPASSSGAAWQPPFFDIAYKSTSLRSQVQCGDDVAAPSAAGGIGGAVTRRVMASLNIPDDEYAMVCTANRTTAFRLLAESYSFQQHGKRLLTVYDYESEAAGAMAESARRRGAEVMSATFAWPGMRVHAADLRKKLLRGRRRGGGGGHRRGLFVFPLVSRMTGARYPYLWMSAAHEQGWHVALDACALGTKDLDTLGLSLLRPDFIVCNFFKVFGENPSGFAGLFVKKSSLAALERSVIARSIGIVSIVPARRWSLHDGYSTELDPVAAAADDLDTTSSFSGPLSGTLIALTLKNVPEMDAAGEENGHSPEIREADPPPPPPPIMEVECRGLDHADALGLIAIGNRLRCISNWLVVAMQKLRHPQSEQGKALVRVYGPRVKFERGPSLAFNVFDWKGEKVAPPLVQKLADRHNISLTCGFLRHICFSDKYDADRAAVLEHIDGGGKRKDAAGEMGIYVVNASLGFLTNFDDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVELLLDLLEFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRVNLFSDKIPRKMILQVYNILHIMLKGGRDCEFYHRLVQFVDLYDPPVKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTKKLRNEGFLSPFHPRYPDILTNSAHPMAVAAVAGGVAVAATGGTWWRRHRLASGGVDRRLACGGVGRRQPGRRRLRGGLGGGGDAWASRLRRQRQGGAYKVFDEMVTKDVEMWS</aaseq>

Gene Sequence

<dnaseqindica>1..1974#2710..2790#2874..2954#3059..3141#3664..3748#4303..4428#5885..6148#ATGCTCTTGCTCATCAACAAGTACCTGTCCAGGAGCAAGAACCCGGCAGCCGGCGACGACAAGGAGATGCCACCGCCGCCGCCGCCACCGCCGGCGAACGGAGCGGAGCGTGAGTTCATGTGCATCCCCGGCTGCGTGCCGGTGCGCGTCAAGAGGGGAACCACGACGACGACGACGACGACGACCACGGCGAGGACGTCGCGGCACAATTTCGTCAAGTCGGCGGCGTCAGGGCTGTTCCCCGGCGCGCAGTTCACCAACCACGAGTCGCTCCCGGCGATGGAGGAGGCGTACGCCGAGTTCGTCGCCGCGTTCCCGCAGTACGCCGGGCTCGCCCAGGCCGACGCCATCAGGGACGGCGAGTACCAGCACCTCGACCGCCACGTGTGCCTCGACTACACCGGCATCAACCTCTTCTCCCACGCCCAGATGAACTCGTCGGTGCCGTCGACGTCGGCCACGCCGCCGGCGTCGTCGTCGGGCGCGGCGTGGCAGCCGCCGTTCTTTGACATCGCGTACAAGTCCACGAGCCTGCGGTCGCAGGTGCAATGCGGGGACGACGTCGCGGCGCCGTCCGCGGCGGGCGGGATCGGCGGCGCCGTGACGAGGCGCGTCATGGCGTCGCTCAACATCCCCGACGACGAGTACGCCATGGTGTGCACGGCGAACCGGACCACCGCGTTCCGGCTGCTGGCGGAGTCCTACTCCTTCCAGCAGCACGGCAAGCGGCTGCTCACCGTGTACGACTACGAGAGCGAGGCGGCGGGCGCGATGGCGGAGAGCGCGCGCCGCCGCGGTGCGGAGGTGATGTCGGCGACGTTCGCGTGGCCGGGCATGCGCGTCCACGCCGCCGACCTCCGCAAGAAGCTGCTCCGCGGGAGGCGGCGCGGCGGCGGCGGCGGGCACCGGAGGGGGCTCTTCGTGTTCCCGCTGGTGTCGCGGATGACGGGGGCCAGGTACCCATACCTGTGGATGAGCGCGGCGCACGAACAAGGGTGGCACGTCGCGCTCGACGCGTGCGCGCTGGGCACCAAGGACCTCGACACGCTGGGCCTCTCCCTCCTCCGCCCGGACTTCATCGTCTGCAACTTCTTCAAGGTGTTCGGCGAGAACCCCTCCGGCTTCGCGGGCCTCTTCGTCAAGAAGTCCAGCCTCGCCGCGCTGGAGCGCTCCGTCATCGCCCGCAGCATCGGCATCGTCAGCATCGTCCCCGCACGCCGCTGGTCGCTCCACGACGGCTACTCCACCGAGCTCGACCCGGTCGCCGCGGCGGCGGACGACCTCGACACCACCAGCTCCTTCTCCGGCCCACTCAGTGGCACCCTCATCGCGCTCACACTCAAGAACGTACCGGAGATGGACGCCGCAGGCGAGGAGAACGGCCACTCGCCGGAGATCCGCGAGGCCGATCCGCCGCCACCACCACCGCCAATAATGGAGGTGGAGTGCAGGGGGCTGGACCACGCGGACGCGCTGGGGCTGATCGCCATAGGCAACCGGCTGAGGTGCATCAGCAACTGGCTGGTGGTGGCGATGCAGAAGCTGCGGCACCCGCAGTCGGAGCAGGGGAAGGCGCTGGTGCGGGTGTACGGGCCGCGGGTGAAGTTCGAGCGGGGGCCATCGCTGGCGTTCAACGTGTTCGACTGGAAGGGGGAGAAGGTGGCGCCGCCGCTGGTGCAGAAGCTCGCCGACCGCCACAACATCTCCCTCACCTGCGGCTTCCTCCGCCACATCTGCTTCTCCGACAAGTACGACGCCGACAGGGCCGCCGTCCTCGAGCACATCGACGGCGGCGGCAAGAGGAAGGACGCCGCCGGCGAGATGGGGATCTACGTGGTGAACGCGTCGCTGGGGTTCTTGACCAACTTCGACGACGCCTACAGGTTGTGGGCGTTCGTGGCCAAGTTCTTGGACGCCGATTTCGTGGAGAAGGAGCGGTGGAGGTACACCGCGCTCAACCAGAAGACGGTGGAGGTGTAGCCGACATGTCCATCCACCTTCAGCTTCCACCATTGGTACACTTCACTGTCACTGTCACTGTTCGCCATTCTTTTGGGATCAGCTCGATCGGCTGTGCAGAGCTGCTCCGTCCATTCTTTGTGTGAGAGAGGCTCGCTCCAGTGTGTTCATGATTATACTGTAAAATGTAGTCTTTGCTTCCTTAGAAAAAAATATGTGCCTATTACTTGTTCGCTATACTGAAATCATTTGGTTGCCATCTCCAGGATATGAATTCTGCATCATTGTTTCAAAGCAGAAAAAGTTACAGCTATTTTCTTTTATCTGCTCAAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACCGATTGATGAAGAATGTTTTATTTTGGCTGCTTTAAGTGTATAACCATGTTGCCCTAAATCTACTTGATCATCAATTGGTTGGCATGTGAACCAGAAAGGAAATTAAAATTTGTTGGCTATTTTCAAATTCATGTAAAACACTATCAAAATATTGGCATTTGTTACCATGACTGGAATGGCATACTTTAGAAAACTGCATGCGAGGATCAGCTTGTTGATGGGTATTCAATTGTTTACATTCTGTTAACTGCTCTATTTGAGTATATTGCATCATACAAGTGAATACATATTACCTTTAAAAAGTATGCTCCTTTATTTTCAAATTTGATTAATTTTCTTTTAAATTCCATCCCATCAGTTGCTTCTTGATTTGCTGGAATTCCGTGAACAAGCTCTTCGACTTATTTTAGATCTGAGCAGCACAGTCATAACATTGCTGGTATGGAAACTCAGTTTGGGTGATGTAACTTGCTATATTTTTTTATTATCTGTAGATAATGACATTTCTACTTTTTTTCACAGCCACATCAGAACTCTTTAATTCTTCATGCTTTTATGGATCTCTTTTGCTCTTTTGTGCGAGTTAACCTTTTCTCTGACAAGGTAATCATTTATTTTATCTCATCCTTTAAAATACTCTACTCTATACCCAATTCTGATTATCTTTTGTACTTGTACATTATCCTTCCTGAATTTCTGATTTACAGATACCAAGAAAGATGATCCTCCAAGTTTACAATATCTTGCATATCATGCTAAAGGGTGGCCGTGATTGTGAATTTTATCATCGGTAAGGCAGTAAGGGTGTTCTGTTATAGAAAACACAAATCCCCCCCCCCACCCAAATCAAAACCTTTAATGCTATCCTGTATACTTTCCTAATCAGCTCAAACATCTGAATACCACAGGTAGTAATGTATCTATTGATGATAATTGGTTCCCTCTGAGAAAAAAAGAAAAAACTAGGTAGCAAAAGTATAGTTCAAAATTTGTAGGCCAGAGAATACTGACTGTTTGACTTTTCATTGCCGACACTTCCCTTGCTTGTTTATAACTATTAGAATTCAAATATCTTGTTTATTAATTCTAAATTCATTAGTTGGTGCATGTTTTTGGGTTTTTAACTTAATAGTTTTATTATTGTTAGTAGCAACAGCTATCTACATACTTGCTTTTCAACTGCATCCCTGTGGGAATCCATTGCGAAGACCAATGACTTCATAAATTGTGTTGCTCTTACCAGTTAGATTCCTTTTATGGAATTCTTTTATCACTTGTTTCTCCACTAAGTTTTGTGTTTTATCATACACAGATTGGTTCAGTTTGTGGACTTATATGATCCACCAGTCAAGGGGTTGCATGAAGATCTAAATTTTGTGAGCCCACGTATTGGAGAGGTGATGCCCATCTCCTTCAGAAGCAATAACTAGGATGTAAAACTTTCTCAACTATAACATAGTGTTAACCCTATGTTTGTGAATTGTGATTATGCAAGCCTTGCTTGCTCTCATCACTCAATGCAATTGATCATTCAACTATGACTGTGAAAGAGATCACACAACTGATGCTTAAGAGTCAGTCACGTAGTCTGGGATATATCTGTAGACTGTAGTGACAACTGTTATACCAAGCGACACTTTGCAGCATGGTTCATGGATGATTCGATTCATACTACTACTACCAGCACATGCAAATGGATTTCCAGACCACTTATAGTTTTCAAAGAGTGCCATGGAAAATGTGCCCTTTCATAGACAGTGCATGGTTTCACAAACTTGCACAGGTTCAATCAAGAGAGGCATAATTAACACATCTTTTATGTATTCAAATCTGATATCCATTTTATTTGACCTTTTTGCTTATGTTCTTTGTATGGTCCATTCATGTTAGCTGTGGCTTCAATTTCATAACTCATTTTATGTGCTTTAACTGTAATACTATTGTTATTCAGGTCCTGGAGGCTGTTGGCCCAATTATCTTTCTTTCAACTGATACAAAAAAGTTAAGAAATGAAGGGTTCCTCAGTCCATTTCATCCACGTTATCCTGACATCCTTACAAACTCTGCTCATCCTATGGTTAGTTATTTGATTATTTCATTAGCTAGGGGTGAATTATCATCAGATTTACATATACTTTCATTTATTAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTGTGCAAATACAGTGATCGCTGCAAGGAGGCAAATTATGTTTTATGTTTGTTGCAACCTAACTTCAAAATGAGAAATGGTTCAATTATTCTAAAAAGTATGTCCTCTCCTTCATGCATATTATTCCTCCTGCAGGGAAGTACATGAACAAGCATTGGTGTCAGCTGATGCTCTACATCATGAAAGGAGAATTCTTCTGAAACAGGAAATTGGAAGGATGGTTTTGTTTTTCACAGATCAACCTAGTCTTCTTGCTCCTAATATTCAGGTTGGTTGAAAATTTCACATTTTATGTACTACCCCCTCTGTTCCAAAATATAAGCACTTCGGGTTTTAGCAAAGATTATGGTTGATTAGAAAAGACTATGATACTCATTAAATGAGGGATGGTTCAACGTGGGACTGTGGGATGGTGGTTAATGGGACAATTAGTACTCTAGAAGTGCTTATATTTTGGGTACAAATTTCAAATCTAGAAGTGTTTATGTTTTGGAACGGAGGGAGTATTACTTTTCTGGGACTGCCATAAACATTTCAGCAATGTCAACCTACCATATTTCTGATCTTAACATTTTGATGCTAGTTTTATGTTGGCCCACTAGTCCTTTCGAATATTAACATCTCTGTATCGTAATGGCTCCAAGAAGTTTTAAAGAAAAACTTATTCGGGTATGATGGGAACATATCATATGGATTTATAGGTAATACTGTAATAGTTATTGATGAAAGGGTCTGCATAAAATTTCAGCCAAATGCAGATCAACTGTCTGTGCCTAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTGGTCCACAGCTCCATTCCACCCAAAAGAGCCACTACCCTCTAATATTATAGTGTATTTACATGAAAATGCCACTCAACTACCCCTTCACCCTTCTTTCCTCCCGTTCTCTCTCCTCCCCCAATCTTCCTCCCAATCCCGAGCTAGTGCGGCGGCGTCGGCGGGCTGCGGCGGCAGCAACAGCGTCAACGGCGACGGGCAACGGCAGTGGCGGGCGGCGGCGGCTGCGGGACGACGACGGACGAGGACGGGCGGCGCGGCCGGGACGACGACGGGCGGTGCGTGCGGCCGGAGGCTGGCGGCGGTGGGCTGCGGCAGCGGCGGAGAGCGGCTGTTGCGGGACGAGGACGGGCGGCGCGGCGGCGGGGTCAGCAGGTGGCGGCACCCCATCTTCTTCCCCATCCTCCGACGACGGCCACAACCGGTTGTGGCAGCGTCTGCGTCGGCAGCATACGGGGACAGCGAGCGTGGGCCGCGACGCGTCGGCGGTGGCAGGCAGTGGCGGCGGTTGCGGGCGGTGTTGCGGTGGCCGCGACTGGCGGCACGTGGTGGCGTCGGCATCGGCTCGCGAGCGGCGGCGTCGACAGGCGACTCGCGTGCGGGGGCGTCGGCAGAAGGCAGCCTGGGCGACGGCGCTTGCGCGGCGGCTTGGGAGGCGGCGGAGATGCGTGGGCCTCCCGGCTGCGGCGGCAACGTCAAGGCGGCGCCTACAAAGTGTTCGATGAAATGGTGACAAAGGATGTAGAAATGTGGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026546