BGIOSGA026548

From RiceWiki
Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026548| Description = cDNA clone:001-021-D02, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA026548, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026548

Description

cDNA clone:001-021-D02, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA026548, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA026548-TA

Ensembl Protein ID

BGIOSGA026548-PA

Length

1122

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29087476..29088597

Sequence Coding Region

29087476..29088597

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29087476..29088597 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29087476..29088597 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGCAGGCGCAGGACAAGGCGGAGGAGGGGGAGGAGGAGGGCACGCGGCAGCAACACGCGCAGGCTGGGCCGGTCGGTGCGGCTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCTGTGGCGATGAGCGCCATCCCCATGAACAGCTGGCTCGTGCCCAAGCCCGAACCGGTGGAGTTCTTCGGCGGGATGGCCATGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAGGTGGAGGGGCGCGGGAGGCGGATCCGCATGCCGGCGGCGTGCGCGGCCAGGATCTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGTTGCTGCAGCAGTCGGAGCCGGCAATCATCGCGGCCACCGGAACCGGCACCGTCCCGGCGATCGCGACCACCGTCGATGGCGTGCTCCGCATCCCCACCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCCTCCGCGGTGGTCGACGGTGAGGAGTCCTCGGCCAAGCGACGCCGCAAGCTGCAGCCCACGCGCGCGGTGGCTGGCGCGTCTCCGCTGGCCACGGCGGCGCCCGCGGCGTACTACCCGGTCATCGCTGACCCTCTCCTGCAAGGTAGCGGCGGCGCGGCGATTTCAGTCCCGAGCGGCCTCGCTCCCATCACCGCCACCGGCGCTCCCCAAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCCACTGGCAGCCCCGCGGTCGCCGGCGGCAACCGCATGATCCCGCAAGCCACCGCCGTATGGATGGTCCCGCAGCCCGCAGGCGCCGCGGGCGCGGGCAACCAACCCACGCAGTTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTCCAGCAGCAGCAACAACAGCAGCCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGGCGGAAGGAAGGCAACAGCGGCGGCGTGGTGGACCACCCGGAGGAGGACGAAGACGACGACGACGACGAGCCGGTCTCCGACTCCAGCCCGGAAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEAQAQDKAEEGEEEGTRQQHAQAGPVGAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVEFFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAINVADFQQQQQQQPVSTTIVQNSNSGEHMHFSGADSHEQQRRGRKEGNSGGVVDHPEEDEDDDDDEPVSDSSPEE</aaseq>

Gene Sequence

<dnaseqindica>1..1122#ATGGAGGCGCAGGCGCAGGACAAGGCGGAGGAGGGGGAGGAGGAGGGCACGCGGCAGCAACACGCGCAGGCTGGGCCGGTCGGTGCGGCTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCTGTGGCGATGAGCGCCATCCCCATGAACAGCTGGCTCGTGCCCAAGCCCGAACCGGTGGAGTTCTTCGGCGGGATGGCCATGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAGGTGGAGGGGCGCGGGAGGCGGATCCGCATGCCGGCGGCGTGCGCGGCCAGGATCTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGTTGCTGCAGCAGTCGGAGCCGGCAATCATCGCGGCCACCGGAACCGGCACCGTCCCGGCGATCGCGACCACCGTCGATGGCGTGCTCCGCATCCCCACCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCCTCCGCGGTGGTCGACGGTGAGGAGTCCTCGGCCAAGCGACGCCGCAAGCTGCAGCCCACGCGCGCGGTGGCTGGCGCGTCTCCGCTGGCCACGGCGGCGCCCGCGGCGTACTACCCGGTCATCGCTGACCCTCTCCTGCAAGGTAGCGGCGGCGCGGCGATTTCAGTCCCGAGCGGCCTCGCTCCCATCACCGCCACCGGCGCTCCCCAAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCCACTGGCAGCCCCGCGGTCGCCGGCGGCAACCGCATGATCCCGCAAGCCACCGCCGTATGGATGGTCCCGCAGCCCGCAGGCGCCGCGGGCGCGGGCAACCAACCCACGCAGTTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTCCAGCAGCAGCAACAACAGCAGCCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGGCGGAAGGAAGGCAACAGCGGCGGCGTGGTGGACCACCCGGAGGAGGACGAAGACGACGACGACGACGAGCCGGTCTCCGACTCCAGCCCGGAAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026548