BGIOSGA026572

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Revision as of 07:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026572| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026572, complete gene.| tag = P0666G1...")
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Gene Name

BGIOSGA026572

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026572, complete gene.

LocusTag

P0666G10.105

Ensembl Transcript ID

BGIOSGA026572-TA

Ensembl Protein ID

BGIOSGA026572-PA

Length

3892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28659365..28663256

Sequence Coding Region

28661924..28663256,28660622..28660702,28660406..28660518,28659692..28659881,28659365..28659576

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28659365..28663256 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28659365..28663256 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCCGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGACGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCGCAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCAAAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGTTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTCAAATAGCACAAGTGATTGTGGATTTTCTAGAGGTAGCTGTCAGTTGTGTTGTCTTCCTCAAAGGCTTCTATCCTCCTCGTGCATTTGAGAGGAGAAGGTATATGAATGTAGTGGTCCAGAAAGCAGTGCACCCCCAACTTGCCGGTTATATCCACTCTGCTACTTCTGGCCTACTCCCTTTCATTCAGAAGGGATTGGTTGAGAGGGTTGTAGTCATCTTCTACGACAAAGCGCATGTGCCAGTTGAGAAGTTTGTGTTCAAGCTTGCAGTTAACCAATCTTATGGCTCCAAGATAGAGGAGGCCAGCCTGGAATTCGCTCTGCGAGCTTTCTTGATCAAACTGGCTGTTGCTGAACCCCTTACTAGAACCCTTCCATCAGATGGCAGCTGGGAGATCGCTGCATACTTCCGATCCCTCCCTCCAGATGGTGAGAAGGAAGCTCAGCTGTGGATCCCTACAGACACCAAACAGTGGATGCAGCCTCCACAGATAACCCCAATCAAGTCCATGAGCTGTGATCCTGTGAAGATGCAGCTTTACCTGGAACAACCTAGCCGCACAGAACCCAGGGATCCACCAACTGAACCCTGA</cdnaseq>

Protein Sequence

<aaseq>MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRWVDVNNVRTGMGNSRTSQIAQVIVDFLEVAVSCVVFLKGFYPPRAFERRRYMNVVVQKAVHPQLAGYIHSATSGLLPFIQKGLVERVVVIFYDKAHVPVEKFVFKLAVNQSYGSKIEEASLEFALRAFLIKLAVAEPLTRTLPSDGSWEIAAYFRSLPPDGEKEAQLWIPTDTKQWMQPPQITPIKSMSCDPVKMQLYLEQPSRTEPRDPPTEP</aaseq>

Gene Sequence

<dnaseqindica>1..1333#2555..2635#2739..2851#3376..3565#3681..3892#ATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCCGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGACGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCGCAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCAAAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGTTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTAAGAAGCCCGGTTGCTCTTTCATTGAAGTCGATGGCTGCATACATGAATTCTTTGCGGGAGATGAGTCTCATTTTGAGACAGAAGCTATATGCAACACTCTTTTTGGGATCAATGAGCTACTAGTGGCGGAGTCCTTCCTAATGTAAAAGCTTAGGAGTTCCATATCAACCAAATATATCCATTTCAAATGTACAATGCTGTGGTTTTTTTTTTATCAGCTTATGGAATGATGAAATTGAAAATTTGTCTTTACTTTTGCATTTCCCTCCAAGTTGAGAATTTTTCCTTTTCCAGGTTCTTTACAGTGTTGCAACTACCACTGAAGGGAATATACTTAATGTGGTTCTGTTGGCCACAATTTCTGAAAATATTTCCTTTTCATAATGTAGCCCCAGGATATCGCATTTGCATTTACTCCCTTTTTTGTGTATAGTTTACTACCACCTACAATTACTAAAGGTGTTTCAATGAGAAGTGAAAACTAGTTAGCGGAACAGTTATTTGTAGTAGGCAACTCTGTAGCTGTTCCTCAATCATGTATTCTTACTAACCATTAAACAGAGAGTTAGGGATATCTGTTTTTTACAGTGATTGGCGAGATGAATCTCAGCTCTGCGACTTGTGTTGTCCTTCCAGTTTTTTGAATCTTGCCTTGCAAAACCATTTCATGTATACTCACTTGACTGATAAGATGATATGTTGGCCATAGTTTCGTTCTACTACTATCGGTGAGAAGTGTGAATGTCATTTTTTCATGTTTCATGTTTTGCAAAATATGGTAGGCCCTACATAATAGTCATTATTGTTGACTGGGAGTCTGATGTGCTGCAAGGGCTAAATGAAACTAGCAAGCTCTCATCGTATACAAACACTCAATATAGCTATTGCCATTTGCTTGTTCCTTTTCATTTGCTCTTTATCTAATGATCTTTTGATTTAGAATTGAACTCTTCTTTCTATGCTTTGAATCATCTGGTGCAGTTTCAAATATGCCCTCTGGCTGGTGGATTATGCCAATCATAGGGGCATAAATCAATAGAAGTTTGTGACAAACCAGAATTCGCCTGAACTGAACCATATGGACAGGAAAAATCAAACTCCACAAGGTAAAAAGCACAAATGCTTACAAATAGTTATACCAGTGGTTCCTGAAGTTAGGTTGATTTTTTTAAGGAATGCCTTTTGTCCTCTCTGCTAAAAGCTTGGTTGGCTTAATAGGTCAAATAGCACAAGTGATTGTGGATTTTCTAGAGGTAGCTGTCAGTTGTGTTGTCTTCCTCAAAGGCTTCTATCCTCCTCGTAAGAATTACTCCTATTTTGTACTTATTTCAGCTTGTTTGTCAATATTTGCTATCTGTAAAGGCACAGTTCGATTAAACATAATGTATCTGACTATCTGTAGGTGCATTTGAGAGGAGAAGGTATATGAATGTAGTGGTCCAGAAAGCAGTGCACCCCCAACTTGCCGGTTATATCCACTCTGCTACTTCTGGCCTACTCCCTTTCATTCAGAAGGTTCCTCCTCTAAATAATTGTTCCTCGTTGTTGCATTTCCTGAACTAGCTTATTTCTAGGTTGTGGTCATGCGGGTACAACATGGGAAGATTTAGGCATTCCCTAAATATTGAATTCATTTTGGTTAATGCAAACGCAATTATGCAGTATACTATGTATCCTGTCTGACAGACTTGAGATTTTCCTTGTGCACACTGTGGTGGTGTTGATTATACCTTTTTATATCGCATTGGCTGATTGGTTATCACAACTCATTGCAATTTATGAGAATAATAGGGAAACTTGCTAATGTATGGATCTCATAGTTCTACCTTAACTCATTATGCATATGCTTGGAGTTTGGTCTAGTTTCTGTCATGTGCGGAGGGAAGTATGGCAACAATTTTATGAGCTTATTTCAAACCTGAGTTACAGTATCGAACAGTCTCTTGGCGTTCATGTGAAGAGCATTTTAGAAATAATTTGTGCTGATTCTTTTTCTTTTCCAACTAGTGAATAACCATAATTTTCTCACAACAATCCAGGGATTGGTTGAGAGGGTTGTAGTCATCTTCTACGACAAAGCGCATGTGCCAGTTGAGAAGTTTGTGTTCAAGCTTGCAGTTAACCAATCTTATGGCTCCAAGATAGAGGAGGCCAGCCTGGAATTCGCTCTGCGAGCTTTCTTGATCAAACTGGCTGTTGCTGAACCCCTTACTAGAACCCTTCCATCAGGTACTCAATCTACATCACCCTTATTTTTCCATACTATCTCCATATTTTGCTAGAAAGGGGAACCATGCTACTAGAAGATCTCTCAAGAGATGCTTGCATTCTGAATTGGTGATAGATGGCAGCTGGGAGATCGCTGCATACTTCCGATCCCTCCCTCCAGATGGTGAGAAGGAAGCTCAGCTGTGGATCCCTACAGACACCAAACAGTGGATGCAGCCTCCACAGATAACCCCAATCAAGTCCATGAGCTGTGATCCTGTGAAGATGCAGCTTTACCTGGAACAACCTAGCCGCACAGAACCCAGGGATCCACCAACTGAACCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026572