BGIOSGA026580

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Revision as of 07:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026580| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026580, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026580

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026580, complete gene.

LocusTag

OSJNBA0033D24.20

Ensembl Transcript ID

BGIOSGA026580-TA

Ensembl Protein ID

BGIOSGA026580-PA

Length

2999

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28441252..28444250

Sequence Coding Region

28444161..28444250,28443118..28443174,28442739..28442921,28442227..28442523,28441845..28442078
,28441252..28441758

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28441252..28444250 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28441252..28444250 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGTGCCGCAGCCATCTCGCTCCGATGCGGCCGGCCGCGACGCCGGCGACCAGCCTAGGGTTTACCAGGTTTGGCGGGGAAGCAACCATACAAACTCGGAGATAATCCAGTGGAATTTTGAAATGCCATCAGGCCCTGCTTTGGAATTCTTCTTGCGAGGGAGGTTTATATTTGGGCCTGATGTGAGATCCATATTTCTCACTATGTTCCTCATCGTTGCACCAGTGGTGGCCTTCTGCGTGTTTGTCGCCAGACACCTCATTGATGACTTTCCCGGTGATTGGGGTATCTCGGTGATGGTTGTGGTGGTTGTCTTCACCGTTTATGATTTGACGCTGCTTCTCCTTACTTCTGGTAGAGATCCTGGTATTATACCTCGTAACACTCATCCTCCTGAGCCTGAAGGCTTTGATGGGAGCAATGATTCTGGAGTTCAGACTCCACAACAGTTGCGTCTGCCTCGGACAAAGGATGTCATTGTAAACGGAATCAGTGTGAGGATTAAATACTGTGACACATGCATGCTTTACCGGCCACCTCGATGCTCACACTGTTCGATATGCAACAACTGTGTGGAACAGTTTGATCATCACTGTCCATGGGTTGGCCAATGCATAGGACTTCGTAATTATCGGTTCTTCTACATGTTTGTATTCTCGACCACGTTACTCTGCCTCTACGTATTTGCTTTCTGTTGGGTGTACATAATCAAGATTAGAAATGCTGAGAGTTTGTCAGTTTGGAAGGCAATGCTAAAGACACCAGCCTCAATCGTTTTGATCATCTACTGCTTCCTTTGTGTATGGTTTGTTGGTGGTCTTTCTGTCTTCCATTGCTATTTGATGAGCACCAACCAGACAACTTATGAGAACTTCAGGTATCGCTACGATAGACGGGCTAACCCGTATAACAGAGGCGTTCTGAACAACTTTCTAGAGATATTCTGCAGCCGTATTCCTCCTTCAAAGAACAATTTCCGGGCAAGGGTCACAGTTGAGCAAGGGCTACAGCAAACCCGTGTAGCATCAAGAGGTTTTATGAGCCCCAACATGGGCAAACCTGTTGGGGATCTTGAAATGGGCAGGAAGCCGGTGCCTTGGGATGAACCGAGGACAGCAGCTGATATCAGGGACTTGGAAGCAGGTCTCGGGGGCTTTTTGGATGAGAAAGAGGGTAGACTAACGCATGCATCCCCAGATCTGAGCAGGGACGACCTTCCAGCTGATCTCATGGAAGGACGAGCTGGCACACATTCAAGGCGGTCAAGTTGGGTTAATAGAACTGGAACTTCAGAATCAGTGGACAGTATGAATGCGCAAATAATTGCTGCTTGGGAAGCTATTCAGAGTGACCCTGTGCATTGA</cdnaseq>

Protein Sequence

<aaseq>MYVPQPSRSDAAGRDAGDQPRVYQVWRGSNHTNSEIIQWNFEMPSGPALEFFLRGRFIFGPDVRSIFLTMFLIVAPVVAFCVFVARHLIDDFPGDWGISVMVVVVVFTVYDLTLLLLTSGRDPGIIPRNTHPPEPEGFDGSNDSGVQTPQQLRLPRTKDVIVNGISVRIKYCDTCMLYRPPRCSHCSICNNCVEQFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLYVFAFCWVYIIKIRNAESLSVWKAMLKTPASIVLIIYCFLCVWFVGGLSVFHCYLMSTNQTTYENFRYRYDRRANPYNRGVLNNFLEIFCSRIPPSKNNFRARVTVEQGLQQTRVASRGFMSPNMGKPVGDLEMGRKPVPWDEPRTAADIRDLEAGLGGFLDEKEGRLTHASPDLSRDDLPADLMEGRAGTHSRRSSWVNRTGTSESVDSMNAQIIAAWEAIQSDPVH</aaseq>

Gene Sequence

<dnaseqindica>1..90#1077..1133#1330..1512#1728..2024#2173..2406#2493..2999#ATGTACGTGCCGCAGCCATCTCGCTCCGATGCGGCCGGCCGCGACGCCGGCGACCAGCCTAGGGTTTACCAGGTTTGGCGGGGAAGCAACGTAAGCACTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCGCCTTTGCCGCAGGGTGAAGCTGGAGCTGGATCTGTACTTAGCGGCGCACTATGCGCAGTGATCGGTGAGATGGGAGTGCTATCTGAGGGATCGGCTGGGGGAATTACTCGTTTTTTATGTGATTTGGTAGTGGGGGTTCGGTTTACGTTTTTGGAGATCGATCCTACAGCGTGATTGGAGGACCTGGTGTTCGATTTTGGGACTCTTTGCTTCACACCTGATTGGGAAATGACTGTTTATGAACTCTATATTAGACTATTAGTGTGCTGTGACAGTTATGTTCACTTGTGTTGTCATAAGAAGCTGGAAACATAGGTCCCAGTATCATCGATAATTAGTTATTTTGGTTTTGCTCTTATTTGTTTTGTCATTTTTAACTCACATGACCAAGAGGAAAATGGATAGATTTGAGTTGGAGTTGTTTTGTTATCTGCCAGTTTAATGATCATGTTCAGTATCTATGGTGAGAATGTCTATGCTAGTTGAAAACGTTTCGTCTAGTCAAAATAGGAATGAAGCGAGCATCTGTGCACAGTTCGAAGTTATACAAGTAAGATATTGCCTATCAATCGTAAACTGATAATCATGAGTTCATGACTTTAGCTAAATTTAGAAGTTAACGGTTTCATAAGTTCTAAGACTTTTTTCTGCAGAAATTTTGTACCTCATCTTGTGATACATTTGGTTCTGCCTTTTGTTTTTCACTTGACATGATTCAGAATCGAGATCTGCATTTGCTAGTGGACCAACAAATCTTGTAGCTAACTCTTAAGATATACGCTGGTCTTCATGCTAAATATTTTGATGAGCTGTGTCATGTGAGTGTGACTTGAGCTCTACAATATATTGCATTTTATTTCCTTATACATTTGGGCATTTGGCTTGGTAACAACATGTTCTTGATAGAAGTTTGTTAGTCATTGGTCAACTTGTACTTCTTTAGCATACAAACTCGGAGATAATCCAGTGGAATTTTGAAATGCCATCAGGCCCTGCTTTGGTGAGCTTCAGCTTTAACCTAAAAGCCGATAGCACAATATAAGCGTAAGGTCCTCCATACAGGGGAGAGCTTCTCTCTGTTGTTATTTAAGTTGTCTGAGTATTGCACGAAAAACAAATATAATGTTTGCTATGAGTGCTTGCAATTGGATTTGATGGAGTTCTGATGGTATCCATTTATATTTTGTATTTTGAAGGAATTCTTCTTGCGAGGGAGGTTTATATTTGGGCCTGATGTGAGATCCATATTTCTCACTATGTTCCTCATCGTTGCACCAGTGGTGGCCTTCTGCGTGTTTGTCGCCAGACACCTCATTGATGACTTTCCCGGTGATTGGGGTATCTCGGTGATGGTTGTGGTGGTTGTCTTCACCGTTTATGTAAGCATACTTGTACAGTCACTATTTCTTTTCTTCACATCTTATAATAATAAGCAGTGGAATTCTTAGCCATCACATCTCCCTTGAAATGGTTTCATTTAGTGTCCCAGATCTTGCACTGACCATGGTTGCTTTTCATAATTTTTTCTGCATGTATTTCTAAGGTTTATACATTTTCAAAATATACAAATAACTAATTTGTTTTCATTTTATAGGATTTGACGCTGCTTCTCCTTACTTCTGGTAGAGATCCTGGTATTATACCTCGTAACACTCATCCTCCTGAGCCTGAAGGCTTTGATGGGAGCAATGATTCTGGAGTTCAGACTCCACAACAGTTGCGTCTGCCTCGGACAAAGGATGTCATTGTAAACGGAATCAGTGTGAGGATTAAATACTGTGACACATGCATGCTTTACCGGCCACCTCGATGCTCACACTGTTCGATATGCAACAACTGTGTGGAACAGTTTGATCATCACTGTCCATGGGTTGGCCAATGCATAGGACTTGTAAGTATCATGTTTTTCCAGCAGTTCTGTACCTATCCTTACCGTAGGAAAGACATGTGCGTATTTGTTTGGAGTTATTCTTCCAGTGCTTTTCATTGAGCTCTCTTCAAATCAACTTGAGCCTAATCATAAAGCATATTTGGTGCAGCGTAATTATCGGTTCTTCTACATGTTTGTATTCTCGACCACGTTACTCTGCCTCTACGTATTTGCTTTCTGTTGGGTGTACATAATCAAGATTAGAAATGCTGAGAGTTTGTCAGTTTGGAAGGCAATGCTAAAGACACCAGCCTCAATCGTTTTGATCATCTACTGCTTCCTTTGTGTATGGTTTGTTGGTGGTCTTTCTGTCTTCCATTGCTATTTGATGAGCACCAACCAGGTAGGTATTAGTTCGATTCAGCATTAATTTCCTAAACACAACGATTTCAATTCATTAGCTAATCATGTAGCCCTGTTCTTTTGCAGACAACTTATGAGAACTTCAGGTATCGCTACGATAGACGGGCTAACCCGTATAACAGAGGCGTTCTGAACAACTTTCTAGAGATATTCTGCAGCCGTATTCCTCCTTCAAAGAACAATTTCCGGGCAAGGGTCACAGTTGAGCAAGGGCTACAGCAAACCCGTGTAGCATCAAGAGGTTTTATGAGCCCCAACATGGGCAAACCTGTTGGGGATCTTGAAATGGGCAGGAAGCCGGTGCCTTGGGATGAACCGAGGACAGCAGCTGATATCAGGGACTTGGAAGCAGGTCTCGGGGGCTTTTTGGATGAGAAAGAGGGTAGACTAACGCATGCATCCCCAGATCTGAGCAGGGACGACCTTCCAGCTGATCTCATGGAAGGACGAGCTGGCACACATTCAAGGCGGTCAAGTTGGGTTAATAGAACTGGAACTTCAGAATCAGTGGACAGTATGAATGCGCAAATAATTGCTGCTTGGGAAGCTATTCAGAGTGACCCTGTGCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026580