BGIOSGA026593

From RiceWiki
Revision as of 07:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026593| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026593, complete gene.| tag = OJ1770_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026593

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026593, complete gene.

LocusTag

OJ1770_H02.31

Ensembl Transcript ID

BGIOSGA026593-TA

Ensembl Protein ID

BGIOSGA026593-PA

Length

2172

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28180513..28182684

Sequence Coding Region

28182682..28182684,28182552..28182588,28182415..28182455,28181184..28181414,28180984..28181086
,28180846..28180913,28180513..28180545

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28180513..28182684 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28180513..28182684 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTCGGCCAAGGCCATGGGGAGGGATCTCAGGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGTACTGCACAAGCGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAGTAACGCTGATGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAACCAAGCCCAGAAGCAGAGACGCCGGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGKYSTEPSNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLVKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRQSNGQGRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHVELILSEKEEAVKKEPETTIAPRRQ</aaseq>

Gene Sequence

<dnaseqindica>1..3#97..133#230..270#1271..1501#1599..1701#1772..1839#2140..2172#ATGGTTAGTCCTGAGCTCTCTCCGCTCCGGTACGTTGATCCGCTCGTGGTTTGTTCCGTTATTGATCTGACGTCTCGCTGTTGCATCTTTTCGCAGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTGTAAGATCTCGATGATATCCTTTTTCCGCGATGGTTTGGTTTCGGTTTGATCTGTCTGTGTAGTGGTTTTTGATGGGATGTTGTTTGTGTGCGCAGCGGCCAAGGCCATGGGGAGGGATCTCAGGGTCCACTTCAAGGTGCGTTTCGTCAACCTGCTCTGTGTGCATCTCTGTTTTTGTGTATTTGGTTGATTTGTTGTAGGTTATTGTGTTTGCTCGTTTTGTGCAATGTTGTTCGGTTAGGGCAAATAATTGTGTGGATGGCATATGCGAAATTATTAGAGTTTCATTCTGTAGATAGCATCGTGAAAGGATTGGATTCTCACTCTGTAGATAGCATTGTGAAAGGATTGGAGTCTGATGATGACCTAAAGAGTAAAAGGTTCTGTTCTGTTTTTCAGACGAACAGTTCCCACGTTACTTTAGGAACATTGATGCACTGTCTTCTGGCGAACTGTTGTATCTCAATGACAAATGGTTCAGAGACAGTGCGACATCATGCTTATTCCTTAGTTATGATTTTGGCCTGATAGAGATCATAAGTGTTTCTGCATTTTGTTCAGAACCTGTGTCGTATATCTGCAAAGTTAGATTTTCGCTATGCGAAAATGGTGTAAGATATTGTGAACTTCACATAATTTTTTTTGACGATATTGCTTGCATAATGCTATTCATGTTTTGATGTTGTTACCTGTTCAAGTGCGCACTGTACAACCTGGAGGAAGTTATTTTTATTAGCCTGATTGTTACGTATAATTCTATTCACATGTTAACCATTTCATTGAATTTTCTTGATCTGATTAAGCTTAGACTTTCACAGGTTACAGCTATTTTATGCTGTTCTATTACTCATTATGGTCTTGTTTCTCATGTTTTCCTTATAGATCTTCCTTACATAAAACTATTGTATCATTATTGTAGAACATTTGGCCTTCTTGTCACACTGCTCATAACTCTCACTAGAAGTTGCTGTTGATATGAAATCATTTCCTGGTACTTTGTGTGCATGGTAAACTGAATTCACTGGACTAGTTTATTGTAAGACTCTGATGCGTATGCGATGGTTTGTTTCTTGGTTCTTGTTATCCTTTTTCCTGTTTCTCTAGCTGAATGTCAAATGCTCTAATAATTGCTGCAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGTACTGCACAAGCGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAGTAACGCTGATGTATGAACCTGTTGCTAGTTTTCCTCTCAATTTTAATGGTGACACTCTTCATATTTTTTTAATATGCTTGGGCTAACTAATGGTTTGTTGCGTATAGGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAACCAAGCCCAGAAGCAGAGACGCCGGACATACCGTGCTCATGGACGCATCAATCGTAAGTTCTCGAGGATGGATGTTGATTTATGGTTCCATTTGTAGTTTACTTATATTGCTTTTGTGGCCAGCTTACATGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGGTATTTGTTTCTTTCATCCCATTATAGTCTCAGTTGTTTTCGTGAATTAGGTAGTTTGTGGGAAGTAATGCTTTGGATTTATATAGACTATTCAAGCTGTTTGGGCCACAATGTTTTTTCTCAGTGCCATGTTCTGTGCAATAATACAATCATGATGTTAACCTAAATCCATGTATCCTTCTCAGCTTGAGGTCCTTGTAGTTGGAGCTAAATTTTGTGGGCGATGCCCCTTTTATCGTTCCAGCATTTCTTTAGCTCTTTTTTTCTTCTAATCCATACTGTCAACTGTTTCTTTTGTAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026593